RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 TRAK2O60296 914 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 DKK1O94907 266 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 MED26O95402 600 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 RFX1P22670 979 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 MSX1P28360 303 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 CLDN10P78369 228 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NRG1Q02297 640 aaPredicted RBP0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 LAPTM4AQ15012 233 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 CTC1Q2NKJ3 1217 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 COL13A1Q5TAT6 717 aaPredicted RBP0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NBPF14Q5TI25 921 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 PPP2R2DQ66LE6 453 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NBPF10Q6P3W6 841 aaKnown RBP0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 FCHSD1Q86WN1 690 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 DZIP3Q86Y13 1208 aaKnown RBP0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 P3H3Q8IVL6 736 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 SVOPQ8N4V2 548 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NBPF15Q8N660 670 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TSEN2Q8NCE0 465 aaKnown RBP0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 GALNT6Q8NCL4 622 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NANOS1Q8WY41 292 aaKnown RBP0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 CNKSR1Q969H4 720 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TRIM11Q96F44 468 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 KRTAP9-9Q9BYP9 154 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 KRTAP9-8Q9BYQ0 159 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 KRTAP9-4Q9BYQ2 154 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 FHDC1Q9C0D6 1143 aaPredicted RBP0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 SAP130Q9H0E3 1048 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 KCNK12Q9HB15 430 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ZNF777Q9ULD5 760 aaPredicted RBP0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 PCDHGA11Q9Y5H2 935 aa0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 DNMT3AQ9Y6K1 912 aaPredicted RBP0.99□□□□□ -2.25
RNU6-1049P-201ENST00000516414 DDX3YO15523 660 aaKnown RBP0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 CYP2E1P05181 493 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ADH1AP07327 375 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ATP4AP20648 1035 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TARSP26639 723 aaKnown RBP0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 PLA2G4AP47712 749 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 USP46P62068 366 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 MTMR3Q13615 1198 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ADGRE1Q14246 886 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NAA30Q147X3 362 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 GRIPAP1Q4V328 841 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 SH3D19Q5HYK7 790 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 RSPH4AQ5TD94 716 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 HDGFL1Q5TGJ6 251 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 PDXDC2PQ6P474 469 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 LRRC69Q6ZNQ3 347 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 KRT25Q7Z3Z0 450 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 CD163Q86VB7 1156 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 BPHLQ86WA6 291 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 CHMP7Q8WUX9 453 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NUDT8Q8WV74 236 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NGLY1Q96IV0 654 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 DCAF5Q96JK2 942 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 PRIMPOLQ96LW4 560 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 HHIPQ96QV1 700 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ZIC5Q96T25 663 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 SPOCK3Q9BQ16 436 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 PRR14Q9BWN1 585 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 KRTAP4-8Q9BYQ9 185 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 C1orf115Q9H7X2 142 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 RNF19AQ9NV58 838 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 KLK14Q9P0G3 267 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ZFATQ9P243 1243 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 GGA1Q9UJY5 639 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 LRFN2Q9ULH4 789 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 IQSEC3Q9UPP2 1182 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 COG6Q9Y2V7 657 aa0.98□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ZBBXA8MT70 800 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ATP5J2-PTCD1G3V325 749 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 SLURP2P0DP57 97 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 VSIG8P0DPA2 414 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 RNF144AP50876 292 aaPredicted RBP0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TBC1D8BQ0IIM8 1120 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NR5A1Q13285 461 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 CRTC2Q53ET0 693 aaPredicted RBP0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 SLC27A3Q5K4L6 730 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 LCE4AQ5TA78 99 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 PRPF38BQ5VTL8 546 aaKnown RBP0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 DESI1Q6ICB0 168 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TXNDC11Q6PKC3 985 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 SV2AQ7L0J3 742 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 LYSMD3Q7Z3D4 306 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ATCAYQ86WG3 371 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 KRTAP1-3Q8IUG1 177 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TRMT44Q8IYL2 757 aaKnown RBP0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 AGGF1Q8N302 714 aaeCLIP0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TMEM151AQ8N4L1 468 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 IRF7Q92985 503 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 XAGE2Q96GT9 111 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ZNF594Q96JF6 807 aaPredicted RBP0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 BTBD6Q96KE9 485 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TSEN34Q9BSV6 310 aaKnown RBP0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TSPAN10Q9H1Z9 355 aaPredicted RBP0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TIMMDC1Q9NPL8 285 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 ANO2Q9NQ90 1003 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 NDFIP2Q9NV92 336 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 KCNK4Q9NYG8 393 aa0.97□□□□□ -2.25
RNU6-1049P-201ENST00000516414 TFIP11Q9UBB9 837 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms