RNA–Protein interactions for RNA: ENST00000515513.5

LINC01411-206, Transcript of long intergenic non-protein coding RNA 1411, humanhuman

TSL 5 BASIC

Gene LINC01411, Length 770 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01411-206ENST00000515513 PKD1L3Q7Z443 1732 aa13.56□□□□□ -0.24
LINC01411-206ENST00000515513 ST20-MTHFSA0A0A6YYL1 179 aa13.55□□□□□ -0.24
LINC01411-206ENST00000515513 A0A0G2JLW4 131 aa13.55□□□□□ -0.24
LINC01411-206ENST00000515513 CAPN15O75808 1086 aa13.55□□□□□ -0.24
LINC01411-206ENST00000515513 TMF1P82094 1093 aa13.55□□□□□ -0.24
LINC01411-206ENST00000515513 FSTL1Q12841 308 aa13.55□□□□□ -0.24
LINC01411-206ENST00000515513 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
LINC01411-206ENST00000515513 RTCBQ9Y3I0 505 aaKnown RBP13.55□□□□□ -0.24
LINC01411-206ENST00000515513 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
LINC01411-206ENST00000515513 TESK2Q96S53 571 aa13.54□□□□□ -0.24
LINC01411-206ENST00000515513 PARP3Q9Y6F1 533 aa13.54□□□□□ -0.24
LINC01411-206ENST00000515513 KDM2BQ8NHM5 1336 aa13.54□□□□□ -0.24
LINC01411-206ENST00000515513 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
LINC01411-206ENST00000515513 DPEP1P16444 411 aa13.53□□□□□ -0.24
LINC01411-206ENST00000515513 ITPK1Q13572 414 aa13.53□□□□□ -0.24
LINC01411-206ENST00000515513 COL13A1Q5TAT6 717 aaPredicted RBP13.53□□□□□ -0.24
LINC01411-206ENST00000515513 C9orf131Q5VYM1 1079 aa13.53□□□□□ -0.24
LINC01411-206ENST00000515513 ASAP1Q9ULH1 1129 aa13.53□□□□□ -0.24
LINC01411-206ENST00000515513 PPM1GO15355 546 aaPredicted RBP13.52□□□□□ -0.25
LINC01411-206ENST00000515513 ADRA2BP18089 450 aa13.52□□□□□ -0.25
LINC01411-206ENST00000515513 RFC4P35249 363 aa13.52□□□□□ -0.25
LINC01411-206ENST00000515513 IFNL2Q8IZJ0 200 aa13.52□□□□□ -0.25
LINC01411-206ENST00000515513 TNS4Q8IZW8 715 aa13.52□□□□□ -0.25
LINC01411-206ENST00000515513 JMYQ8N9B5 988 aa13.52□□□□□ -0.25
LINC01411-206ENST00000515513 C10orf71Q711Q0 1435 aa13.52□□□□□ -0.25
LINC01411-206ENST00000515513 KIAA1551Q9HCM1 1747 aa13.51□□□□□ -0.25
LINC01411-206ENST00000515513 HTRA3P83110 453 aa13.51□□□□□ -0.25
LINC01411-206ENST00000515513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC01411-206ENST00000515513 PIM2Q9P1W9 311 aa13.51□□□□□ -0.25
LINC01411-206ENST00000515513 C4AP0C0L4 1744 aa13.5□□□□□ -0.25
LINC01411-206ENST00000515513 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
LINC01411-206ENST00000515513 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
LINC01411-206ENST00000515513 ARFGEF1Q9Y6D6 1849 aa13.49□□□□□ -0.25
LINC01411-206ENST00000515513 PHKG2P15735 406 aa13.49□□□□□ -0.25
LINC01411-206ENST00000515513 PRELPP51888 382 aa13.49□□□□□ -0.25
LINC01411-206ENST00000515513 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
LINC01411-206ENST00000515513 DALRD3Q5D0E6 543 aaKnown RBP13.49□□□□□ -0.25
LINC01411-206ENST00000515513 SMC1BQ8NDV3 1235 aa13.49□□□□□ -0.25
LINC01411-206ENST00000515513 ARHGEF1Q92888 912 aaKnown RBP13.49□□□□□ -0.25
LINC01411-206ENST00000515513 ATG3Q9NT62 314 aa13.49□□□□□ -0.25
LINC01411-206ENST00000515513 RNF181Q9P0P0 153 aa13.49□□□□□ -0.25
LINC01411-206ENST00000515513 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
LINC01411-206ENST00000515513 BRCA1P38398 1863 aaKnown RBP13.48□□□□□ -0.25
LINC01411-206ENST00000515513 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
LINC01411-206ENST00000515513 RRAGCQ9HB90 399 aa13.48□□□□□ -0.25
LINC01411-206ENST00000515513 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
LINC01411-206ENST00000515513 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
LINC01411-206ENST00000515513 GYS1P13807 737 aa13.47□□□□□ -0.25
LINC01411-206ENST00000515513 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
LINC01411-206ENST00000515513 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
LINC01411-206ENST00000515513 RPS6KA4O75676 772 aa13.46□□□□□ -0.25
LINC01411-206ENST00000515513 HSP90AB1P08238 724 aaKnown RBP13.46□□□□□ -0.25
LINC01411-206ENST00000515513 DCAF5Q96JK2 942 aa13.46□□□□□ -0.25
LINC01411-206ENST00000515513 EYA1Q99502 592 aa13.46□□□□□ -0.25
LINC01411-206ENST00000515513 KDRP35968 1356 aa13.45□□□□□ -0.26
LINC01411-206ENST00000515513 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
LINC01411-206ENST00000515513 ERVV-2B6SEH9 535 aa13.45□□□□□ -0.26
LINC01411-206ENST00000515513 PCNTO95613 3336 aa13.44□□□□□ -0.26
LINC01411-206ENST00000515513 KCNA3P22001 575 aa13.44□□□□□ -0.26
LINC01411-206ENST00000515513 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
LINC01411-206ENST00000515513 ZC3H4Q9UPT8 1303 aaKnown RBP13.43□□□□□ -0.26
LINC01411-206ENST00000515513 CABP4P57796 275 aa13.43□□□□□ -0.26
LINC01411-206ENST00000515513 ANKRD26Q9UPS8 1709 aa13.42□□□□□ -0.26
LINC01411-206ENST00000515513 HSPA1AP0DMV8 641 aaKnown RBP13.42□□□□□ -0.26
LINC01411-206ENST00000515513 HSPA1BP0DMV9 641 aaKnown RBP13.42□□□□□ -0.26
LINC01411-206ENST00000515513 SLC4A9Q96Q91 983 aa13.42□□□□□ -0.26
LINC01411-206ENST00000515513 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
LINC01411-206ENST00000515513 CHRNA5P30532 468 aa13.41□□□□□ -0.26
LINC01411-206ENST00000515513 FKBP8Q14318 412 aa13.41□□□□□ -0.26
LINC01411-206ENST00000515513 SBF1O95248 1867 aa13.41□□□□□ -0.26
LINC01411-206ENST00000515513 PLEKHO1Q53GL0 409 aaPredicted RBP13.4□□□□□ -0.26
LINC01411-206ENST00000515513 SRP68Q9UHB9 627 aaKnown RBP13.4□□□□□ -0.26
LINC01411-206ENST00000515513 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
LINC01411-206ENST00000515513 GLTPD2A6NH11 291 aa13.39□□□□□ -0.27
LINC01411-206ENST00000515513 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
LINC01411-206ENST00000515513 ZPR1O75312 459 aa13.39□□□□□ -0.27
LINC01411-206ENST00000515513 LMNB1P20700 586 aa13.39□□□□□ -0.27
LINC01411-206ENST00000515513 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
LINC01411-206ENST00000515513 CARD14Q9BXL6 1004 aa13.39□□□□□ -0.27
LINC01411-206ENST00000515513 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
LINC01411-206ENST00000515513 MTHFSP49914 203 aa13.38□□□□□ -0.27
LINC01411-206ENST00000515513 DDR1Q08345 913 aa13.38□□□□□ -0.27
LINC01411-206ENST00000515513 EIF4A2Q14240 407 aaKnown RBP13.38□□□□□ -0.27
LINC01411-206ENST00000515513 AMOTQ4VCS5 1084 aa13.38□□□□□ -0.27
LINC01411-206ENST00000515513 C1orf141Q5JVX7 400 aa13.38□□□□□ -0.27
LINC01411-206ENST00000515513 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
LINC01411-206ENST00000515513 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
LINC01411-206ENST00000515513 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
LINC01411-206ENST00000515513 RASSF7Q02833 373 aa13.37□□□□□ -0.27
LINC01411-206ENST00000515513 TNNT2P45379 298 aaPredicted RBP13.36□□□□□ -0.27
LINC01411-206ENST00000515513 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
LINC01411-206ENST00000515513 TM4SF1P30408 202 aa13.35□□□□□ -0.27
LINC01411-206ENST00000515513 USPL1Q5W0Q7 1092 aa13.35□□□□□ -0.27
LINC01411-206ENST00000515513 TTLL6Q8N841 843 aa13.35□□□□□ -0.27
LINC01411-206ENST00000515513 NFATC2IPQ8NCF5 419 aa13.35□□□□□ -0.27
LINC01411-206ENST00000515513 KDM6AO15550 1401 aaPredicted RBP13.35□□□□□ -0.27
LINC01411-206ENST00000515513 TIAM2Q8IVF5 1701 aa13.33□□□□□ -0.28
LINC01411-206ENST00000515513 CCDC88AQ3V6T2 1871 aa13.32□□□□□ -0.28
LINC01411-206ENST00000515513 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
LINC01411-206ENST00000515513 TJP1Q07157 1748 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms