RNA–Protein interactions for RNA: ENST00000515332.5

SGMS2-209, Transcript of sphingomyelin synthase 2, human

TSL 3

Gene SGMS2, Length 498 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGMS2-209	ENST00000515332	TMF1	P82094	1093 aa		33.97	■■■■□ 3.03
SGMS2-209	ENST00000515332	TGFB2	P61812	414 aa		33.96	■■■■□ 3.03
SGMS2-209	ENST00000515332	NMRK2	Q9NPI5	230 aa		33.96	■■■■□ 3.03
SGMS2-209	ENST00000515332	PPM1G	O15355	546 aa	Predicted RBP	33.95	■■■■□ 3.03
SGMS2-209	ENST00000515332	ARHGAP27	Q6ZUM4	889 aa		33.95	■■■■□ 3.03
SGMS2-209	ENST00000515332	ATG3	Q9NT62	314 aa		33.94	■■■■□ 3.02
SGMS2-209	ENST00000515332	C10orf71	Q711Q0	1435 aa		33.91	■■■■□ 3.02
SGMS2-209	ENST00000515332	PHKG2	P15735	406 aa		33.9	■■■■□ 3.02
SGMS2-209	ENST00000515332	TRAPPC3L	Q5T215	181 aa		33.9	■■■■□ 3.02
SGMS2-209	ENST00000515332	EYA1	Q99502	592 aa		33.9	■■■■□ 3.02
SGMS2-209	ENST00000515332	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.9	■■■■□ 3.02
SGMS2-209	ENST00000515332	RTCB	Q9Y3I0	505 aa	Known RBP	33.9	■■■■□ 3.02
SGMS2-209	ENST00000515332	DPEP1	P16444	411 aa		33.89	■■■■□ 3.02
SGMS2-209	ENST00000515332	IFNL2	Q8IZJ0	200 aa		33.89	■■■■□ 3.02
SGMS2-209	ENST00000515332	NLGN1	Q8N2Q7	840 aa		33.89	■■■■□ 3.02
SGMS2-209	ENST00000515332	CARD14	Q9BXL6	1004 aa		33.89	■■■■□ 3.02
SGMS2-209	ENST00000515332	FCHSD2	O94868	740 aa		33.88	■■■■□ 3.01
SGMS2-209	ENST00000515332	CCDC87	Q9NVE4	849 aa		33.86	■■■■□ 3.01
SGMS2-209	ENST00000515332	KDR	P35968	1356 aa		33.85	■■■■□ 3.01
SGMS2-209	ENST00000515332	WASHC2A	Q641Q2	1341 aa		33.85	■■■■□ 3.01
SGMS2-209	ENST00000515332	WDR90	Q96KV7	1748 aa		33.85	■■■■□ 3.01
SGMS2-209	ENST00000515332	HTRA3	P83110	453 aa		33.84	■■■■□ 3.01
SGMS2-209	ENST00000515332	TRIM26	Q12899	539 aa	Predicted RBP	33.84	■■■■□ 3.01
SGMS2-209	ENST00000515332	RBM46	Q8TBY0	533 aa	Known RBP	33.84	■■■■□ 3.01
SGMS2-209	ENST00000515332	ARHGEF1	Q92888	912 aa	Known RBP	33.84	■■■■□ 3.01
SGMS2-209	ENST00000515332	SLC4A9	Q96Q91	983 aa		33.84	■■■■□ 3.01
SGMS2-209	ENST00000515332	C4A	P0C0L4	1744 aa		33.83	■■■■□ 3.01
SGMS2-209	ENST00000515332	C9orf131	Q5VYM1	1079 aa		33.83	■■■■□ 3.01
SGMS2-209	ENST00000515332	RBM42	Q9BTD8	480 aa	Known RBP	33.83	■■■■□ 3.01
SGMS2-209	ENST00000515332	ANKRD26	Q9UPS8	1709 aa		33.83	■■■■□ 3.01
SGMS2-209	ENST00000515332	GYS1	P13807	737 aa		33.82	■■■■□ 3
SGMS2-209	ENST00000515332	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.81	■■■■□ 3
SGMS2-209	ENST00000515332	BRCA1	P38398	1863 aa	Known RBP	33.8	■■■■□ 3
SGMS2-209	ENST00000515332	CDCA8	Q53HL2	280 aa		33.8	■■■■□ 3
SGMS2-209	ENST00000515332	PARP3	Q9Y6F1	533 aa		33.8	■■■■□ 3
SGMS2-209	ENST00000515332	ADRA2B	P18089	450 aa		33.79	■■■■□ 3
SGMS2-209	ENST00000515332	KCNA3	P22001	575 aa		33.79	■■■■□ 3
SGMS2-209	ENST00000515332	RFC4	P35249	363 aa		33.79	■■■■□ 3
SGMS2-209	ENST00000515332	RC3H1	Q5TC82	1133 aa	Known RBP	33.78	■■■■□ 3
SGMS2-209	ENST00000515332	KLRG1	Q96E93	195 aa		33.78	■■■■□ 3
SGMS2-209	ENST00000515332	PLEKHG2	Q9H7P9	1386 aa		33.76	■■■■□ 3
SGMS2-209	ENST00000515332	COL13A1	Q5TAT6	717 aa	Predicted RBP	33.76	■■■□□ 2.99
SGMS2-209	ENST00000515332	CNTNAP4	Q9C0A0	1308 aa		33.76	■■■□□ 2.99
SGMS2-209	ENST00000515332	ZNF831	Q5JPB2	1677 aa		33.75	■■■□□ 2.99
SGMS2-209	ENST00000515332	RPS6KA4	O75676	772 aa		33.75	■■■□□ 2.99
SGMS2-209	ENST00000515332	COL5A3	P25940	1745 aa	Predicted RBP	33.75	■■■□□ 2.99
SGMS2-209	ENST00000515332	KCP	Q6ZWJ8	1503 aa		33.74	■■■□□ 2.99
SGMS2-209	ENST00000515332	POLK	Q9UBT6	870 aa		33.74	■■■□□ 2.99
SGMS2-209	ENST00000515332	ARFGEF1	Q9Y6D6	1849 aa		33.74	■■■□□ 2.99
SGMS2-209	ENST00000515332	ERVV-2	B6SEH9	535 aa		33.73	■■■□□ 2.99
SGMS2-209	ENST00000515332	FSTL1	Q12841	308 aa		33.73	■■■□□ 2.99
SGMS2-209	ENST00000515332	PIM2	Q9P1W9	311 aa		33.73	■■■□□ 2.99
SGMS2-209	ENST00000515332	EIF4A2	Q14240	407 aa	Known RBP	33.72	■■■□□ 2.99
SGMS2-209	ENST00000515332	JMY	Q8N9B5	988 aa		33.72	■■■□□ 2.99
SGMS2-209	ENST00000515332	DCAF5	Q96JK2	942 aa		33.71	■■■□□ 2.99
SGMS2-209	ENST00000515332	RNF181	Q9P0P0	153 aa		33.7	■■■□□ 2.99
SGMS2-209	ENST00000515332	KDM2B	Q8NHM5	1336 aa		33.7	■■■□□ 2.99
SGMS2-209	ENST00000515332	DALRD3	Q5D0E6	543 aa	Known RBP	33.69	■■■□□ 2.98
SGMS2-209	ENST00000515332	RRAGC	Q9HB90	399 aa		33.69	■■■□□ 2.98
SGMS2-209	ENST00000515332	MYH14	Q7Z406	1995 aa	Known RBP	33.69	■■■□□ 2.98
SGMS2-209	ENST00000515332	CAPN15	O75808	1086 aa		33.68	■■■□□ 2.98
SGMS2-209	ENST00000515332	SRP68	Q9UHB9	627 aa	Known RBP	33.67	■■■□□ 2.98
SGMS2-209	ENST00000515332	HSP90AB1	P08238	724 aa	Known RBP	33.65	■■■□□ 2.98
SGMS2-209	ENST00000515332	TNNT2	P45379	298 aa	Predicted RBP	33.65	■■■□□ 2.98
SGMS2-209	ENST00000515332	CABP4	P57796	275 aa		33.65	■■■□□ 2.98
SGMS2-209	ENST00000515332	FKBP8	Q14318	412 aa		33.65	■■■□□ 2.98
SGMS2-209	ENST00000515332	KDM6A	O15550	1401 aa	Predicted RBP	33.64	■■■□□ 2.98
SGMS2-209	ENST00000515332	CHRNA5	P30532	468 aa		33.64	■■■□□ 2.98
SGMS2-209	ENST00000515332	DDR1	Q08345	913 aa		33.64	■■■□□ 2.98
SGMS2-209	ENST00000515332	PTCD1	O75127	700 aa	Known RBP	33.63	■■■□□ 2.97
SGMS2-209	ENST00000515332	CRKL	P46109	303 aa	Known RBP	33.62	■■■□□ 2.97
SGMS2-209	ENST00000515332	USP42	Q9H9J4	1324 aa	Known RBP	33.61	■■■□□ 2.97
SGMS2-209	ENST00000515332	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.61	■■■□□ 2.97
SGMS2-209	ENST00000515332	PCNT	O95613	3336 aa		33.6	■■■□□ 2.97
SGMS2-209	ENST00000515332	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.6	■■■□□ 2.97
SGMS2-209	ENST00000515332	TNS4	Q8IZW8	715 aa		33.6	■■■□□ 2.97
SGMS2-209	ENST00000515332	TNRC6C	Q9HCJ0	1690 aa	Known RBP	33.6	■■■□□ 2.97
SGMS2-209	ENST00000515332	SBF1	O95248	1867 aa		33.57	■■■□□ 2.96
SGMS2-209	ENST00000515332	SMC1B	Q8NDV3	1235 aa		33.57	■■■□□ 2.96
SGMS2-209	ENST00000515332	POLRMT	O00411	1230 aa	Known RBP	33.54	■■■□□ 2.96
SGMS2-209	ENST00000515332	MTHFS	P49914	203 aa		33.54	■■■□□ 2.96
SGMS2-209	ENST00000515332	RASSF7	Q02833	373 aa		33.54	■■■□□ 2.96
SGMS2-209	ENST00000515332	NFATC2IP	Q8NCF5	419 aa		33.53	■■■□□ 2.96
SGMS2-209	ENST00000515332	AMOT	Q4VCS5	1084 aa		33.52	■■■□□ 2.96
SGMS2-209	ENST00000515332	TJP1	Q07157	1748 aa		33.52	■■■□□ 2.96
SGMS2-209	ENST00000515332	TM4SF1	P30408	202 aa		33.51	■■■□□ 2.95
SGMS2-209	ENST00000515332	C1orf141	Q5JVX7	400 aa		33.5	■■■□□ 2.95
SGMS2-209	ENST00000515332	INTS5	Q6P9B9	1019 aa	Known RBP	33.5	■■■□□ 2.95
SGMS2-209	ENST00000515332	PRELP	P51888	382 aa		33.49	■■■□□ 2.95
SGMS2-209	ENST00000515332	AEBP1	Q8IUX7	1158 aa		33.48	■■■□□ 2.95
SGMS2-209	ENST00000515332	POLR3GL	Q9BT43	218 aa		33.48	■■■□□ 2.95
SGMS2-209	ENST00000515332	ADAMTS7	Q9UKP4	1686 aa		33.48	■■■□□ 2.95
SGMS2-209	ENST00000515332	USPL1	Q5W0Q7	1092 aa		33.47	■■■□□ 2.95
SGMS2-209	ENST00000515332	ZPR1	O75312	459 aa		33.46	■■■□□ 2.95
SGMS2-209	ENST00000515332	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.46	■■■□□ 2.95
SGMS2-209	ENST00000515332	HSPA1A	P0DMV8	641 aa	Known RBP	33.44	■■■□□ 2.94
SGMS2-209	ENST00000515332	HSPA1B	P0DMV9	641 aa	Known RBP	33.44	■■■□□ 2.94
SGMS2-209	ENST00000515332	GLTPD2	A6NH11	291 aa		33.43	■■■□□ 2.94
SGMS2-209	ENST00000515332	VEGFA	P15692	232 aa	Predicted RBP	33.43	■■■□□ 2.94
SGMS2-209	ENST00000515332	LMNB1	P20700	586 aa		33.43	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms