RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 KRT24Q2M2I5 525 aa16.18■□□□□ 0.18
SNCAIP-221ENST00000515215 TWISTNBQ3B726 338 aaPredicted RBP16.18■□□□□ 0.18
SNCAIP-221ENST00000515215 DDX54Q8TDD1 881 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-221ENST00000515215 CCDC9Q9Y3X0 531 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-221ENST00000515215 GLI3P10071 1580 aa16.17■□□□□ 0.18
SNCAIP-221ENST00000515215 BTBD11A6QL63 1104 aa16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 EXOC5O00471 708 aa16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 FKBP8Q14318 412 aa16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 ATRNO75882 1429 aa16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 THSD7AQ9UPZ6 1657 aa16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 ELL2O00472 640 aaPredicted RBP16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 PLIN1O60240 522 aa16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 IRX6P78412 446 aaPredicted RBP16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 FBXO41Q8TF61 875 aa16.16■□□□□ 0.18
SNCAIP-221ENST00000515215 ERVV-2B6SEH9 535 aa16.15■□□□□ 0.18
SNCAIP-221ENST00000515215 KCNQ3O43525 872 aa16.15■□□□□ 0.18
SNCAIP-221ENST00000515215 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
SNCAIP-221ENST00000515215 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 DDB1Q16531 1140 aa16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 BCL2L13Q9BXK5 485 aa16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 ITGB4P16144 1822 aa16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 HEG1Q9ULI3 1381 aa16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 PAPPAQ13219 1627 aa16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 SOS1Q07889 1333 aaPredicted RBP16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 FAM98CQ17RN3 349 aaKnown RBP16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
SNCAIP-221ENST00000515215 CABP4P57796 275 aa16.13■□□□□ 0.17
SNCAIP-221ENST00000515215 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
SNCAIP-221ENST00000515215 GJD4Q96KN9 370 aaPredicted RBP16.12■□□□□ 0.17
SNCAIP-221ENST00000515215 TRPC5Q9UL62 973 aaPredicted RBP16.12■□□□□ 0.17
SNCAIP-221ENST00000515215 UBR2Q8IWV8 1755 aa16.12■□□□□ 0.17
SNCAIP-221ENST00000515215 DOT1LQ8TEK3 1739 aa16.12■□□□□ 0.17
SNCAIP-221ENST00000515215 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
SNCAIP-221ENST00000515215 CACNA1FO60840 1977 aa16.11■□□□□ 0.17
SNCAIP-221ENST00000515215 MRPL50Q8N5N7 158 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-221ENST00000515215 HOXB7P09629 217 aa16.1■□□□□ 0.17
SNCAIP-221ENST00000515215 SLC39A6Q13433 755 aa16.1■□□□□ 0.17
SNCAIP-221ENST00000515215 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
SNCAIP-221ENST00000515215 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
SNCAIP-221ENST00000515215 MARCH10Q8NA82 808 aaPredicted RBP16.1■□□□□ 0.17
SNCAIP-221ENST00000515215 C5P01031 1676 aa16.09■□□□□ 0.17
SNCAIP-221ENST00000515215 ONECUT3O60422 494 aaPredicted RBP16.08■□□□□ 0.17
SNCAIP-221ENST00000515215 FRAT1Q92837 279 aaPredicted RBP16.08■□□□□ 0.17
SNCAIP-221ENST00000515215 KIF16BQ96L93 1317 aa16.08■□□□□ 0.16
SNCAIP-221ENST00000515215 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.16
SNCAIP-221ENST00000515215 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
SNCAIP-221ENST00000515215 PDE3AQ14432 1141 aa16.08■□□□□ 0.16
SNCAIP-221ENST00000515215 KCPQ6ZWJ8 1503 aa16.07■□□□□ 0.16
SNCAIP-221ENST00000515215 BCL9O00512 1426 aa16.07■□□□□ 0.16
SNCAIP-221ENST00000515215 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
SNCAIP-221ENST00000515215 QTRT2Q9H974 415 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-221ENST00000515215 NOB1Q9ULX3 412 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-221ENST00000515215 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
SNCAIP-221ENST00000515215 CANXP27824 592 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-221ENST00000515215 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-221ENST00000515215 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
SNCAIP-221ENST00000515215 TNNQ9UQP3 1299 aa16.06■□□□□ 0.16
SNCAIP-221ENST00000515215 CCDC30Q5VVM6 783 aa16.05■□□□□ 0.16
SNCAIP-221ENST00000515215 ATF7IPQ6VMQ6 1270 aa16.05■□□□□ 0.16
SNCAIP-221ENST00000515215 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
SNCAIP-221ENST00000515215 PIGBQ92521 554 aa16.05■□□□□ 0.16
SNCAIP-221ENST00000515215 LAMB4A4D0S4 1761 aa16.05■□□□□ 0.16
SNCAIP-221ENST00000515215 TRIM27P14373 513 aa16.05■□□□□ 0.16
SNCAIP-221ENST00000515215 ARHGAP45Q92619 1136 aa16.05■□□□□ 0.16
SNCAIP-221ENST00000515215 CRBNQ96SW2 442 aa16.05■□□□□ 0.16
SNCAIP-221ENST00000515215 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
SNCAIP-221ENST00000515215 RLBP1P12271 317 aa16.04■□□□□ 0.16
SNCAIP-221ENST00000515215 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
SNCAIP-221ENST00000515215 EXOC6Q8TAG9 804 aa16.04■□□□□ 0.16
SNCAIP-221ENST00000515215 FMNL2Q96PY5 1086 aa16.04■□□□□ 0.16
SNCAIP-221ENST00000515215 IPO8O15397 1037 aaKnown RBP16.03■□□□□ 0.16
SNCAIP-221ENST00000515215 PANK1Q8TE04 598 aa16.03■□□□□ 0.16
SNCAIP-221ENST00000515215 SLC4A2P04920 1241 aa16.02■□□□□ 0.16
SNCAIP-221ENST00000515215 PRIM1P49642 420 aaKnown RBP16.02■□□□□ 0.16
SNCAIP-221ENST00000515215 ZNF772Q68DY9 489 aaPredicted RBP16.02■□□□□ 0.16
SNCAIP-221ENST00000515215 CHMP4AQ9BY43 222 aa16.02■□□□□ 0.16
SNCAIP-221ENST00000515215 RGS12O14924 1447 aa16.02■□□□□ 0.16
SNCAIP-221ENST00000515215 A0A0G2JS52 829 aa16.02■□□□□ 0.15
SNCAIP-221ENST00000515215 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.15
SNCAIP-221ENST00000515215 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.15
SNCAIP-221ENST00000515215 DZIP1LQ8IYY4 767 aaKnown RBP16.02■□□□□ 0.15
SNCAIP-221ENST00000515215 NECTIN2Q92692 538 aa16.02■□□□□ 0.15
SNCAIP-221ENST00000515215 STK31Q9BXU1 1019 aa16.02■□□□□ 0.15
SNCAIP-221ENST00000515215 ATG3Q9NT62 314 aa16.02■□□□□ 0.15
SNCAIP-221ENST00000515215 ASAP1Q9ULH1 1129 aa16.02■□□□□ 0.15
SNCAIP-221ENST00000515215 MS4A1P11836 297 aa16.01■□□□□ 0.15
SNCAIP-221ENST00000515215 G2E3Q7L622 706 aa16.01■□□□□ 0.15
SNCAIP-221ENST00000515215 SEPT12Q8IYM1 358 aa16.01■□□□□ 0.15
SNCAIP-221ENST00000515215 CLUAP1Q96AJ1 413 aa16.01■□□□□ 0.15
SNCAIP-221ENST00000515215 BRWD3Q6RI45 1802 aa16.01■□□□□ 0.15
SNCAIP-221ENST00000515215 PTPRCP08575 1304 aa16■□□□□ 0.15
SNCAIP-221ENST00000515215 SBF2Q86WG5 1849 aa16■□□□□ 0.15
SNCAIP-221ENST00000515215 ABCC4O15439 1325 aa16■□□□□ 0.15
SNCAIP-221ENST00000515215 NHSQ6T4R5 1651 aa16■□□□□ 0.15
SNCAIP-221ENST00000515215 SYTL4Q96C24 671 aaPredicted RBP15.99■□□□□ 0.15
SNCAIP-221ENST00000515215 ACSBG1Q96GR2 724 aa15.99■□□□□ 0.15
SNCAIP-221ENST00000515215 CHPF2Q9P2E5 772 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms