RNA–Protein interactions for RNA: ENST00000515145.1

TNFRSF25-220, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 4

Gene TNFRSF25, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-220ENST00000515145 ERVV-2B6SEH9 535 aa22.29■■□□□ 1.16
TNFRSF25-220ENST00000515145 ITPK1Q13572 414 aa22.29■■□□□ 1.16
TNFRSF25-220ENST00000515145 SULT6B1Q6IMI4 303 aa22.29■■□□□ 1.16
TNFRSF25-220ENST00000515145 UTRNP46939 3433 aa22.28■■□□□ 1.16
TNFRSF25-220ENST00000515145 MTHFSP49914 203 aa22.27■■□□□ 1.16
TNFRSF25-220ENST00000515145 ZNF831Q5JPB2 1677 aa22.26■■□□□ 1.15
TNFRSF25-220ENST00000515145 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.26■■□□□ 1.15
TNFRSF25-220ENST00000515145 PHF14O94880 888 aa22.26■■□□□ 1.15
TNFRSF25-220ENST00000515145 ATP6V1AP38606 617 aa22.26■■□□□ 1.15
TNFRSF25-220ENST00000515145 CC2D1BQ5T0F9 858 aaKnown RBP22.26■■□□□ 1.15
TNFRSF25-220ENST00000515145 SMIM5Q71RC9 77 aa22.26■■□□□ 1.15
TNFRSF25-220ENST00000515145 NLGN2Q8NFZ4 835 aa22.26■■□□□ 1.15
TNFRSF25-220ENST00000515145 NPC1L1Q9UHC9 1359 aa22.25■■□□□ 1.15
TNFRSF25-220ENST00000515145 SENP3-EIF4A1A0A087X0R7 540 aa22.25■■□□□ 1.15
TNFRSF25-220ENST00000515145 SSFA2P28290 1259 aa22.25■■□□□ 1.15
TNFRSF25-220ENST00000515145 C1orf141Q5JVX7 400 aa22.24■■□□□ 1.15
TNFRSF25-220ENST00000515145 SLC4A9Q96Q91 983 aa22.24■■□□□ 1.15
TNFRSF25-220ENST00000515145 COL5A3P25940 1745 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF25-220ENST00000515145 GNPATO15228 680 aa22.22■■□□□ 1.15
TNFRSF25-220ENST00000515145 CABP4P57796 275 aa22.22■■□□□ 1.15
TNFRSF25-220ENST00000515145 SCN11AQ9UI33 1791 aa22.22■■□□□ 1.15
TNFRSF25-220ENST00000515145 COL3A1P02461 1466 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF25-220ENST00000515145 GPR162Q16538 588 aa22.21■■□□□ 1.15
TNFRSF25-220ENST00000515145 RBM42Q9BTD8 480 aaKnown RBP22.2■■□□□ 1.14
TNFRSF25-220ENST00000515145 C1QTNF8P60827 252 aa22.19■■□□□ 1.14
TNFRSF25-220ENST00000515145 DIAPH1O60610 1272 aaKnown RBP22.18■■□□□ 1.14
TNFRSF25-220ENST00000515145 HMOX1P09601 288 aa22.18■■□□□ 1.14
TNFRSF25-220ENST00000515145 CICQ96RK0 1608 aaPredicted RBP22.17■■□□□ 1.14
TNFRSF25-220ENST00000515145 MRC1P22897 1456 aa22.17■■□□□ 1.14
TNFRSF25-220ENST00000515145 CNTNAP4Q9C0A0 1308 aa22.17■■□□□ 1.14
TNFRSF25-220ENST00000515145 AKAP4Q5JQC9 854 aa22.17■■□□□ 1.14
TNFRSF25-220ENST00000515145 PELP1Q8IZL8 1130 aaKnown RBP22.17■■□□□ 1.14
TNFRSF25-220ENST00000515145 CD2APQ9Y5K6 639 aa22.17■■□□□ 1.14
TNFRSF25-220ENST00000515145 NFATC2IPQ8NCF5 419 aa22.16■■□□□ 1.14
TNFRSF25-220ENST00000515145 TJP1Q07157 1748 aa22.15■■□□□ 1.14
TNFRSF25-220ENST00000515145 ADAMTS7Q9UKP4 1686 aa22.15■■□□□ 1.14
TNFRSF25-220ENST00000515145 RC3H1Q5TC82 1133 aaKnown RBP22.15■■□□□ 1.14
TNFRSF25-220ENST00000515145 MYH14Q7Z406 1995 aaKnown RBP22.15■■□□□ 1.14
TNFRSF25-220ENST00000515145 GOLGB1Q14789 3259 aaKnown RBP22.14■■□□□ 1.14
TNFRSF25-220ENST00000515145 YBX3P16989 372 aaKnown RBP eCLIP22.14■■□□□ 1.13
TNFRSF25-220ENST00000515145 CNGB1Q14028 1251 aaPredicted RBP22.14■■□□□ 1.13
TNFRSF25-220ENST00000515145 RTCBQ9Y3I0 505 aaKnown RBP22.14■■□□□ 1.13
TNFRSF25-220ENST00000515145 VIRMAQ69YN4 1812 aaKnown RBP22.13■■□□□ 1.13
TNFRSF25-220ENST00000515145 PTCD1O75127 700 aaKnown RBP22.13■■□□□ 1.13
TNFRSF25-220ENST00000515145 C4AP0C0L4 1744 aa22.12■■□□□ 1.13
TNFRSF25-220ENST00000515145 MTHFSDQ2M296 383 aaKnown RBP22.12■■□□□ 1.13
TNFRSF25-220ENST00000515145 SLC52A2Q9HAB3 445 aa22.12■■□□□ 1.13
TNFRSF25-220ENST00000515145 RNMTO43148 476 aaKnown RBP22.11■■□□□ 1.13
TNFRSF25-220ENST00000515145 RPS6KA4O75676 772 aa22.11■■□□□ 1.13
TNFRSF25-220ENST00000515145 ADRA2BP18089 450 aa22.11■■□□□ 1.13
TNFRSF25-220ENST00000515145 TRAPPC3LQ5T215 181 aa22.11■■□□□ 1.13
TNFRSF25-220ENST00000515145 LGR6Q9HBX8 967 aa22.11■■□□□ 1.13
TNFRSF25-220ENST00000515145 MMP10P09238 476 aa22.09■■□□□ 1.13
TNFRSF25-220ENST00000515145 ARHGEF1Q92888 912 aaKnown RBP22.09■■□□□ 1.13
TNFRSF25-220ENST00000515145 KCPQ6ZWJ8 1503 aa22.08■■□□□ 1.13
TNFRSF25-220ENST00000515145 GRIN3BO60391 1043 aa22.08■■□□□ 1.13
TNFRSF25-220ENST00000515145 CRKLP46109 303 aaKnown RBP22.08■■□□□ 1.13
TNFRSF25-220ENST00000515145 U2SURPO15042 1029 aaKnown RBP22.07■■□□□ 1.12
TNFRSF25-220ENST00000515145 KIF13BQ9NQT8 1826 aa22.06■■□□□ 1.12
TNFRSF25-220ENST00000515145 GYS1P13807 737 aa22.05■■□□□ 1.12
TNFRSF25-220ENST00000515145 RFC4P35249 363 aa22.05■■□□□ 1.12
TNFRSF25-220ENST00000515145 IFFO2Q5TF58 517 aa22.05■■□□□ 1.12
TNFRSF25-220ENST00000515145 NLGN1Q8N2Q7 840 aa22.05■■□□□ 1.12
TNFRSF25-220ENST00000515145 KIAA1551Q9HCM1 1747 aa22.05■■□□□ 1.12
TNFRSF25-220ENST00000515145 C10orf71Q711Q0 1435 aa22.05■■□□□ 1.12
TNFRSF25-220ENST00000515145 GIGYF1O75420 1035 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF25-220ENST00000515145 SLC39A6Q13433 755 aa22.04■■□□□ 1.12
TNFRSF25-220ENST00000515145 DNAJC10Q8IXB1 793 aa22.04■■□□□ 1.12
TNFRSF25-220ENST00000515145 UBR2Q8IWV8 1755 aa22.04■■□□□ 1.12
TNFRSF25-220ENST00000515145 PXDNLA1KZ92 1463 aa22.03■■□□□ 1.12
TNFRSF25-220ENST00000515145 INTS5Q6P9B9 1019 aaKnown RBP22.02■■□□□ 1.12
TNFRSF25-220ENST00000515145 GAS2L2Q8NHY3 880 aa22.02■■□□□ 1.12
TNFRSF25-220ENST00000515145 CFAP53Q96M91 514 aa22.02■■□□□ 1.12
TNFRSF25-220ENST00000515145 USP42Q9H9J4 1324 aaKnown RBP22.02■■□□□ 1.12
TNFRSF25-220ENST00000515145 PPP2R1AP30153 589 aa22■■□□□ 1.11
TNFRSF25-220ENST00000515145 CCDC87Q9NVE4 849 aa22■■□□□ 1.11
TNFRSF25-220ENST00000515145 SRP68Q9UHB9 627 aaKnown RBP22■■□□□ 1.11
TNFRSF25-220ENST00000515145 WWC3Q9ULE0 1092 aa22■■□□□ 1.11
TNFRSF25-220ENST00000515145 SIPA1L3O60292 1781 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF25-220ENST00000515145 RSPH6AQ9H0K4 717 aa21.99■■□□□ 1.11
TNFRSF25-220ENST00000515145 SOS1Q07889 1333 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF25-220ENST00000515145 GNAT3A8MTJ3 354 aa21.98■■□□□ 1.11
TNFRSF25-220ENST00000515145 CYP19A1P11511 503 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF25-220ENST00000515145 PRKAR2BP31323 418 aa21.98■■□□□ 1.11
TNFRSF25-220ENST00000515145 IL17REQ8NFR9 667 aa21.98■■□□□ 1.11
TNFRSF25-220ENST00000515145 FKBP8Q14318 412 aa21.97■■□□□ 1.11
TNFRSF25-220ENST00000515145 VSIG10Q8N0Z9 540 aa21.97■■□□□ 1.11
TNFRSF25-220ENST00000515145 PARP3Q9Y6F1 533 aa21.97■■□□□ 1.11
TNFRSF25-220ENST00000515145 N4BP2Q86UW6 1770 aaPredicted RBP21.97■■□□□ 1.11
TNFRSF25-220ENST00000515145 PHACTR3Q96KR7 559 aa21.96■■□□□ 1.11
TNFRSF25-220ENST00000515145 ZBTB1Q9Y2K1 713 aa21.96■■□□□ 1.11
TNFRSF25-220ENST00000515145 CEMIPQ8WUJ3 1361 aa21.96■■□□□ 1.11
TNFRSF25-220ENST00000515145 TGFB2P61812 414 aa21.95■■□□□ 1.1
TNFRSF25-220ENST00000515145 DDR1Q08345 913 aa21.95■■□□□ 1.1
TNFRSF25-220ENST00000515145 NUDCQ9Y266 331 aa21.95■■□□□ 1.1
TNFRSF25-220ENST00000515145 ADCY9O60503 1353 aa21.95■■□□□ 1.1
TNFRSF25-220ENST00000515145 COL15A1P39059 1388 aa21.95■■□□□ 1.1
TNFRSF25-220ENST00000515145 TEFQ10587 303 aa21.94■■□□□ 1.1
TNFRSF25-220ENST00000515145 TTC5Q8N0Z6 440 aa21.94■■□□□ 1.1
TNFRSF25-220ENST00000515145 ATP10DQ9P241 1426 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms