RNA–Protein interactions for RNA: ENST00000514898.1

RUFY3-213, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 4

Gene RUFY3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-213ENST00000514898 KDRP35968 1356 aa32.16■■■□□ 2.74
RUFY3-213ENST00000514898 ZNF526Q8TF50 670 aaPredicted RBP32.15■■■□□ 2.74
RUFY3-213ENST00000514898 EIF4A2Q14240 407 aaKnown RBP32.14■■■□□ 2.74
RUFY3-213ENST00000514898 IFFO2Q5TF58 517 aa32.14■■■□□ 2.74
RUFY3-213ENST00000514898 SLC4A9Q96Q91 983 aa32.14■■■□□ 2.74
RUFY3-213ENST00000514898 PLEKHG2Q9H7P9 1386 aa32.13■■■□□ 2.73
RUFY3-213ENST00000514898 PXDNLA1KZ92 1463 aa32.12■■■□□ 2.73
RUFY3-213ENST00000514898 ZNF831Q5JPB2 1677 aa32.11■■■□□ 2.73
RUFY3-213ENST00000514898 MMP10P09238 476 aa32.11■■■□□ 2.73
RUFY3-213ENST00000514898 HSPA6P17066 643 aa32.11■■■□□ 2.73
RUFY3-213ENST00000514898 KIF3CO14782 793 aa32.09■■■□□ 2.73
RUFY3-213ENST00000514898 COL5A3P25940 1745 aaPredicted RBP32.07■■■□□ 2.72
RUFY3-213ENST00000514898 N4BP2Q86UW6 1770 aaPredicted RBP32.07■■■□□ 2.72
RUFY3-213ENST00000514898 ERVV-2B6SEH9 535 aa32.05■■■□□ 2.72
RUFY3-213ENST00000514898 C10orf71Q711Q0 1435 aa32.05■■■□□ 2.72
RUFY3-213ENST00000514898 MYH14Q7Z406 1995 aaKnown RBP32.03■■■□□ 2.72
RUFY3-213ENST00000514898 KDM6AO15550 1401 aaPredicted RBP32.03■■■□□ 2.72
RUFY3-213ENST00000514898 TRAPPC3LQ5T215 181 aa32.03■■■□□ 2.72
RUFY3-213ENST00000514898 RTCBQ9Y3I0 505 aaKnown RBP32.03■■■□□ 2.72
RUFY3-213ENST00000514898 TNNT2P45379 298 aaPredicted RBP32.02■■■□□ 2.72
RUFY3-213ENST00000514898 TGFB2P61812 414 aa32.02■■■□□ 2.72
RUFY3-213ENST00000514898 RC3H1Q5TC82 1133 aaKnown RBP32.02■■■□□ 2.72
RUFY3-213ENST00000514898 NLGN1Q8N2Q7 840 aa32.02■■■□□ 2.72
RUFY3-213ENST00000514898 ARHGEF1Q92888 912 aaKnown RBP32.02■■■□□ 2.72
RUFY3-213ENST00000514898 DCAF5Q96JK2 942 aa32.01■■■□□ 2.71
RUFY3-213ENST00000514898 TIMELESSQ9UNS1 1208 aa32.01■■■□□ 2.71
RUFY3-213ENST00000514898 CNTNAP4Q9C0A0 1308 aa32■■■□□ 2.71
RUFY3-213ENST00000514898 BRCA1P38398 1863 aaKnown RBP32■■■□□ 2.71
RUFY3-213ENST00000514898 GYS1P13807 737 aa32■■■□□ 2.71
RUFY3-213ENST00000514898 C4AP0C0L4 1744 aa32■■■□□ 2.71
RUFY3-213ENST00000514898 A0A0G2JLW4 131 aa31.99■■■□□ 2.71
RUFY3-213ENST00000514898 ADRA2BP18089 450 aa31.99■■■□□ 2.71
RUFY3-213ENST00000514898 RBM42Q9BTD8 480 aaKnown RBP31.99■■■□□ 2.71
RUFY3-213ENST00000514898 RPS6KA4O75676 772 aa31.97■■■□□ 2.71
RUFY3-213ENST00000514898 TRIM26Q12899 539 aaPredicted RBP31.97■■■□□ 2.71
RUFY3-213ENST00000514898 HSP90AB1P08238 724 aaKnown RBP31.96■■■□□ 2.71
RUFY3-213ENST00000514898 BCS1LQ9Y276 419 aa31.95■■■□□ 2.71
RUFY3-213ENST00000514898 DPEP1P16444 411 aa31.94■■■□□ 2.7
RUFY3-213ENST00000514898 PLEKHO1Q53GL0 409 aaPredicted RBP31.94■■■□□ 2.7
RUFY3-213ENST00000514898 KCNA3P22001 575 aa31.93■■■□□ 2.7
RUFY3-213ENST00000514898 ZNF530Q6P9A1 599 aaPredicted RBP31.92■■■□□ 2.7
RUFY3-213ENST00000514898 AEBP1Q8IUX7 1158 aa31.91■■■□□ 2.7
RUFY3-213ENST00000514898 CCDC87Q9NVE4 849 aa31.91■■■□□ 2.7
RUFY3-213ENST00000514898 RFC4P35249 363 aa31.9■■■□□ 2.7
RUFY3-213ENST00000514898 CABP4P57796 275 aa31.9■■■□□ 2.7
RUFY3-213ENST00000514898 POLR3GLQ9BT43 218 aa31.9■■■□□ 2.7
RUFY3-213ENST00000514898 AMOTQ4VCS5 1084 aa31.89■■■□□ 2.7
RUFY3-213ENST00000514898 PANK3Q9H999 370 aa31.89■■■□□ 2.7
RUFY3-213ENST00000514898 ARFGEF1Q9Y6D6 1849 aa31.89■■■□□ 2.69
RUFY3-213ENST00000514898 TJP1Q07157 1748 aa31.87■■■□□ 2.69
RUFY3-213ENST00000514898 ARHGAP27Q6ZUM4 889 aa31.87■■■□□ 2.69
RUFY3-213ENST00000514898 PARP3Q9Y6F1 533 aa31.87■■■□□ 2.69
RUFY3-213ENST00000514898 ADAMTS7Q9UKP4 1686 aa31.86■■■□□ 2.69
RUFY3-213ENST00000514898 TOMM70O94826 608 aa31.86■■■□□ 2.69
RUFY3-213ENST00000514898 PTCD1O75127 700 aaKnown RBP31.85■■■□□ 2.69
RUFY3-213ENST00000514898 FCHSD2O94868 740 aa31.85■■■□□ 2.69
RUFY3-213ENST00000514898 CRKLP46109 303 aaKnown RBP31.85■■■□□ 2.69
RUFY3-213ENST00000514898 MTHFSP49914 203 aa31.85■■■□□ 2.69
RUFY3-213ENST00000514898 NFATC2IPQ8NCF5 419 aa31.85■■■□□ 2.69
RUFY3-213ENST00000514898 NMRK2Q9NPI5 230 aa31.85■■■□□ 2.69
RUFY3-213ENST00000514898 SRP68Q9UHB9 627 aaKnown RBP31.85■■■□□ 2.69
RUFY3-213ENST00000514898 USP42Q9H9J4 1324 aaKnown RBP31.83■■■□□ 2.69
RUFY3-213ENST00000514898 APLP1P51693 650 aa31.83■■■□□ 2.69
RUFY3-213ENST00000514898 DDR1Q08345 913 aa31.83■■■□□ 2.69
RUFY3-213ENST00000514898 DNAJC5GQ8N7S2 189 aa31.83■■■□□ 2.69
RUFY3-213ENST00000514898 FKBP8Q14318 412 aa31.82■■■□□ 2.68
RUFY3-213ENST00000514898 SCN11AQ9UI33 1791 aa31.81■■■□□ 2.68
RUFY3-213ENST00000514898 CLSPNQ9HAW4 1339 aa31.8■■■□□ 2.68
RUFY3-213ENST00000514898 HSPA5P11021 654 aaKnown RBP31.8■■■□□ 2.68
RUFY3-213ENST00000514898 INTS5Q6P9B9 1019 aaKnown RBP31.8■■■□□ 2.68
RUFY3-213ENST00000514898 C1orf141Q5JVX7 400 aa31.79■■■□□ 2.68
RUFY3-213ENST00000514898 C9orf131Q5VYM1 1079 aa31.79■■■□□ 2.68
RUFY3-213ENST00000514898 SULT6B1Q6IMI4 303 aa31.79■■■□□ 2.68
RUFY3-213ENST00000514898 IL13P35225 146 aa31.78■■■□□ 2.68
RUFY3-213ENST00000514898 PIM2Q9P1W9 311 aa31.78■■■□□ 2.68
RUFY3-213ENST00000514898 EIF4G2P78344 907 aaKnown RBP eCLIP31.76■■■□□ 2.67
RUFY3-213ENST00000514898 MORC1Q86VD1 984 aa31.76■■■□□ 2.67
RUFY3-213ENST00000514898 TM4SF1P30408 202 aa31.75■■■□□ 2.67
RUFY3-213ENST00000514898 POLRMTO00411 1230 aaKnown RBP31.74■■■□□ 2.67
RUFY3-213ENST00000514898 SBF1O95248 1867 aa31.74■■■□□ 2.67
RUFY3-213ENST00000514898 DALRD3Q5D0E6 543 aaKnown RBP31.73■■■□□ 2.67
RUFY3-213ENST00000514898 CHRNA5P30532 468 aa31.72■■■□□ 2.67
RUFY3-213ENST00000514898 RBM46Q8TBY0 533 aaKnown RBP31.72■■■□□ 2.67
RUFY3-213ENST00000514898 DNAJC10Q8IXB1 793 aa31.71■■■□□ 2.67
RUFY3-213ENST00000514898 WDR90Q96KV7 1748 aa31.71■■■□□ 2.67
RUFY3-213ENST00000514898 LGR6Q9HBX8 967 aa31.7■■■□□ 2.67
RUFY3-213ENST00000514898 MRC1P22897 1456 aa31.7■■■□□ 2.66
RUFY3-213ENST00000514898 KCPQ6ZWJ8 1503 aa31.7■■■□□ 2.66
RUFY3-213ENST00000514898 AKAP4Q5JQC9 854 aa31.69■■■□□ 2.66
RUFY3-213ENST00000514898 SOS1Q07889 1333 aaPredicted RBP31.69■■■□□ 2.66
RUFY3-213ENST00000514898 SLC52A2Q9HAB3 445 aa31.68■■■□□ 2.66
RUFY3-213ENST00000514898 USPL1Q5W0Q7 1092 aa31.67■■■□□ 2.66
RUFY3-213ENST00000514898 AFDNP55196 1824 aaKnown RBP31.67■■■□□ 2.66
RUFY3-213ENST00000514898 CYP19A1P11511 503 aaPredicted RBP31.66■■■□□ 2.66
RUFY3-213ENST00000514898 RNF181Q9P0P0 153 aa31.66■■■□□ 2.66
RUFY3-213ENST00000514898 NRXN2Q9P2S2 1712 aa31.66■■■□□ 2.66
RUFY3-213ENST00000514898 VIRMAQ69YN4 1812 aaKnown RBP31.65■■■□□ 2.66
RUFY3-213ENST00000514898 AMER1Q5JTC6 1135 aaPredicted RBP31.65■■■□□ 2.66
RUFY3-213ENST00000514898 HTRA3P83110 453 aa31.63■■■□□ 2.65
RUFY3-213ENST00000514898 SLC39A6Q13433 755 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms