RNA–Protein interactions for RNA: ENST00000514845.5

CAST-241, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-241ENST00000514845 SIK1P57059 783 aa12.04□□□□□ -0.48
CAST-241ENST00000514845 RNF181Q9P0P0 153 aa12.04□□□□□ -0.48
CAST-241ENST00000514845 PCDH11XQ9BZA7 1347 aa12.04□□□□□ -0.48
CAST-241ENST00000514845 PCDH11YQ9BZA8 1340 aa12.04□□□□□ -0.48
CAST-241ENST00000514845 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
CAST-241ENST00000514845 NSD3Q9BZ95 1437 aa12.03□□□□□ -0.48
CAST-241ENST00000514845 COG3Q96JB2 828 aa12.03□□□□□ -0.48
CAST-241ENST00000514845 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
CAST-241ENST00000514845 PLEKHG2Q9H7P9 1386 aa12.03□□□□□ -0.48
CAST-241ENST00000514845 ITGB4P16144 1822 aa12.02□□□□□ -0.48
CAST-241ENST00000514845 SMC1BQ8NDV3 1235 aa12.02□□□□□ -0.49
CAST-241ENST00000514845 TERF2IPQ9NYB0 399 aa12.02□□□□□ -0.49
CAST-241ENST00000514845 ASAP1Q9ULH1 1129 aa12.02□□□□□ -0.49
CAST-241ENST00000514845 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
CAST-241ENST00000514845 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
CAST-241ENST00000514845 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
CAST-241ENST00000514845 HSP90AB2PQ58FF8 381 aa12.01□□□□□ -0.49
CAST-241ENST00000514845 SIN3AQ96ST3 1273 aa12.01□□□□□ -0.49
CAST-241ENST00000514845 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
CAST-241ENST00000514845 BRCA1P38398 1863 aaKnown RBP12□□□□□ -0.49
CAST-241ENST00000514845 HMGB2P26583 209 aaKnown RBP12□□□□□ -0.49
CAST-241ENST00000514845 TMF1P82094 1093 aa12□□□□□ -0.49
CAST-241ENST00000514845 DCAF5Q96JK2 942 aa12□□□□□ -0.49
CAST-241ENST00000514845 GYS1P13807 737 aa11.99□□□□□ -0.49
CAST-241ENST00000514845 RASSF7Q02833 373 aa11.99□□□□□ -0.49
CAST-241ENST00000514845 TRAPPC3LQ5T215 181 aa11.99□□□□□ -0.49
CAST-241ENST00000514845 RTL1A6NKG5 1358 aa11.99□□□□□ -0.49
CAST-241ENST00000514845 CHRNA5P30532 468 aa11.98□□□□□ -0.49
CAST-241ENST00000514845 NLGN1Q8N2Q7 840 aa11.98□□□□□ -0.49
CAST-241ENST00000514845 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
CAST-241ENST00000514845 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
CAST-241ENST00000514845 GGNBP2Q9H3C7 697 aa11.98□□□□□ -0.49
CAST-241ENST00000514845 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
CAST-241ENST00000514845 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
CAST-241ENST00000514845 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
CAST-241ENST00000514845 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
CAST-241ENST00000514845 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
CAST-241ENST00000514845 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
CAST-241ENST00000514845 RTCBQ9Y3I0 505 aaKnown RBP11.97□□□□□ -0.49
CAST-241ENST00000514845 PARP3Q9Y6F1 533 aa11.97□□□□□ -0.49
CAST-241ENST00000514845 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
CAST-241ENST00000514845 TNRC6CQ9HCJ0 1690 aaKnown RBP11.97□□□□□ -0.49
CAST-241ENST00000514845 SMG6Q86US8 1419 aaKnown RBP11.96□□□□□ -0.49
CAST-241ENST00000514845 FOXN1O15353 648 aa11.96□□□□□ -0.49
CAST-241ENST00000514845 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.49
CAST-241ENST00000514845 SBF1O95248 1867 aa11.95□□□□□ -0.5
CAST-241ENST00000514845 INSRP06213 1382 aa11.95□□□□□ -0.5
CAST-241ENST00000514845 DDR1Q08345 913 aa11.95□□□□□ -0.5
CAST-241ENST00000514845 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
CAST-241ENST00000514845 CARD11Q9BXL7 1154 aa11.95□□□□□ -0.5
CAST-241ENST00000514845 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
CAST-241ENST00000514845 KDRP35968 1356 aa11.94□□□□□ -0.5
CAST-241ENST00000514845 POTECB2RU33 542 aa11.94□□□□□ -0.5
CAST-241ENST00000514845 FYB1O15117 783 aa11.94□□□□□ -0.5
CAST-241ENST00000514845 VEGFAP15692 232 aaPredicted RBP11.93□□□□□ -0.5
CAST-241ENST00000514845 RFC4P35249 363 aa11.93□□□□□ -0.5
CAST-241ENST00000514845 FKBP8Q14318 412 aa11.93□□□□□ -0.5
CAST-241ENST00000514845 FAM161AQ3B820 660 aa11.93□□□□□ -0.5
CAST-241ENST00000514845 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
CAST-241ENST00000514845 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
CAST-241ENST00000514845 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
CAST-241ENST00000514845 EMILIN1Q9Y6C2 1016 aa11.92□□□□□ -0.5
CAST-241ENST00000514845 FLT4P35916 1363 aa11.92□□□□□ -0.5
CAST-241ENST00000514845 PHKG2P15735 406 aa11.91□□□□□ -0.5
CAST-241ENST00000514845 SPG7Q9UQ90 795 aa11.91□□□□□ -0.5
CAST-241ENST00000514845 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
CAST-241ENST00000514845 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.5
CAST-241ENST00000514845 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
CAST-241ENST00000514845 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
CAST-241ENST00000514845 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
CAST-241ENST00000514845 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
CAST-241ENST00000514845 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
CAST-241ENST00000514845 PUS7Q96PZ0 661 aaKnown RBP11.9□□□□□ -0.5
CAST-241ENST00000514845 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
CAST-241ENST00000514845 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
CAST-241ENST00000514845 TESK2Q96S53 571 aa11.89□□□□□ -0.51
CAST-241ENST00000514845 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
CAST-241ENST00000514845 LMNB1P20700 586 aa11.88□□□□□ -0.51
CAST-241ENST00000514845 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
CAST-241ENST00000514845 EYA1Q99502 592 aa11.88□□□□□ -0.51
CAST-241ENST00000514845 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
CAST-241ENST00000514845 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
CAST-241ENST00000514845 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
CAST-241ENST00000514845 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
CAST-241ENST00000514845 NFKBIEO00221 500 aa11.87□□□□□ -0.51
CAST-241ENST00000514845 PPM1GO15355 546 aaPredicted RBP11.87□□□□□ -0.51
CAST-241ENST00000514845 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
CAST-241ENST00000514845 LBX1P52954 281 aa11.87□□□□□ -0.51
CAST-241ENST00000514845 ABHD8Q96I13 439 aa11.87□□□□□ -0.51
CAST-241ENST00000514845 TM4SF1P30408 202 aa11.86□□□□□ -0.51
CAST-241ENST00000514845 CTCFP49711 727 aaPredicted RBP11.86□□□□□ -0.51
CAST-241ENST00000514845 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
CAST-241ENST00000514845 TONSLQ96HA7 1378 aa11.85□□□□□ -0.51
CAST-241ENST00000514845 ST20-MTHFSA0A0A6YYL1 179 aa11.85□□□□□ -0.51
CAST-241ENST00000514845 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
CAST-241ENST00000514845 CRKLP46109 303 aaKnown RBP11.85□□□□□ -0.51
CAST-241ENST00000514845 VEGFBP49765 207 aa11.85□□□□□ -0.51
CAST-241ENST00000514845 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
CAST-241ENST00000514845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■□□ 15.1
CAST-241ENST00000514845 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms