RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 COL5A3P25940 1745 aaPredicted RBP31.59■■■□□ 2.65
SMAD1-214ENST00000514831 KIAA1551Q9HCM1 1747 aa31.59■■■□□ 2.65
SMAD1-214ENST00000514831 ATP6V1AP38606 617 aa31.59■■■□□ 2.65
SMAD1-214ENST00000514831 EIF4A2Q14240 407 aaKnown RBP31.58■■■□□ 2.65
SMAD1-214ENST00000514831 ATG3Q9NT62 314 aa31.58■■■□□ 2.65
SMAD1-214ENST00000514831 WWC3Q9ULE0 1092 aa31.54■■■□□ 2.64
SMAD1-214ENST00000514831 PXDNLA1KZ92 1463 aa31.53■■■□□ 2.64
SMAD1-214ENST00000514831 N4BP2Q86UW6 1770 aaPredicted RBP31.51■■■□□ 2.64
SMAD1-214ENST00000514831 MMP10P09238 476 aa31.51■■■□□ 2.63
SMAD1-214ENST00000514831 ZNF526Q8TF50 670 aaPredicted RBP31.51■■■□□ 2.63
SMAD1-214ENST00000514831 C4AP0C0L4 1744 aa31.5■■■□□ 2.63
SMAD1-214ENST00000514831 CEP350Q5VT06 3117 aa31.5■■■□□ 2.63
SMAD1-214ENST00000514831 ERVV-2B6SEH9 535 aa31.5■■■□□ 2.63
SMAD1-214ENST00000514831 TNNT2P45379 298 aaPredicted RBP31.5■■■□□ 2.63
SMAD1-214ENST00000514831 RTCBQ9Y3I0 505 aaKnown RBP31.49■■■□□ 2.63
SMAD1-214ENST00000514831 C10orf71Q711Q0 1435 aa31.49■■■□□ 2.63
SMAD1-214ENST00000514831 KDM6AO15550 1401 aaPredicted RBP31.48■■■□□ 2.63
SMAD1-214ENST00000514831 HSP90AB1P08238 724 aaKnown RBP31.47■■■□□ 2.63
SMAD1-214ENST00000514831 DCAF5Q96JK2 942 aa31.47■■■□□ 2.63
SMAD1-214ENST00000514831 SLC4A9Q96Q91 983 aa31.47■■■□□ 2.63
SMAD1-214ENST00000514831 POLR3GLQ9BT43 218 aa31.47■■■□□ 2.63
SMAD1-214ENST00000514831 BRCA1P38398 1863 aaKnown RBP31.46■■■□□ 2.63
SMAD1-214ENST00000514831 ADRA2BP18089 450 aa31.46■■■□□ 2.63
SMAD1-214ENST00000514831 TRAPPC3LQ5T215 181 aa31.46■■■□□ 2.63
SMAD1-214ENST00000514831 CNTNAP4Q9C0A0 1308 aa31.46■■■□□ 2.63
SMAD1-214ENST00000514831 CLSPNQ9HAW4 1339 aa31.46■■■□□ 2.63
SMAD1-214ENST00000514831 MYH14Q7Z406 1995 aaKnown RBP31.45■■■□□ 2.63
SMAD1-214ENST00000514831 HSPA6P17066 643 aa31.45■■■□□ 2.63
SMAD1-214ENST00000514831 RC3H1Q5TC82 1133 aaKnown RBP31.44■■■□□ 2.62
SMAD1-214ENST00000514831 NLGN1Q8N2Q7 840 aa31.44■■■□□ 2.62
SMAD1-214ENST00000514831 TGFB2P61812 414 aa31.43■■■□□ 2.62
SMAD1-214ENST00000514831 RBM42Q9BTD8 480 aaKnown RBP31.43■■■□□ 2.62
SMAD1-214ENST00000514831 PLEKHO1Q53GL0 409 aaPredicted RBP31.42■■■□□ 2.62
SMAD1-214ENST00000514831 AMOTQ4VCS5 1084 aa31.4■■■□□ 2.62
SMAD1-214ENST00000514831 ZNF530Q6P9A1 599 aaPredicted RBP31.4■■■□□ 2.62
SMAD1-214ENST00000514831 ARHGEF1Q92888 912 aaKnown RBP31.4■■■□□ 2.62
SMAD1-214ENST00000514831 KIF3CO14782 793 aa31.39■■■□□ 2.62
SMAD1-214ENST00000514831 RPS6KA4O75676 772 aa31.39■■■□□ 2.62
SMAD1-214ENST00000514831 TJP1Q07157 1748 aa31.38■■■□□ 2.61
SMAD1-214ENST00000514831 GYS1P13807 737 aa31.38■■■□□ 2.61
SMAD1-214ENST00000514831 ARFGEF1Q9Y6D6 1849 aa31.38■■■□□ 2.61
SMAD1-214ENST00000514831 CABP4P57796 275 aa31.37■■■□□ 2.61
SMAD1-214ENST00000514831 IFFO2Q5TF58 517 aa31.37■■■□□ 2.61
SMAD1-214ENST00000514831 PANK3Q9H999 370 aa31.37■■■□□ 2.61
SMAD1-214ENST00000514831 CCDC87Q9NVE4 849 aa31.37■■■□□ 2.61
SMAD1-214ENST00000514831 SCN11AQ9UI33 1791 aa31.36■■■□□ 2.61
SMAD1-214ENST00000514831 RFC4P35249 363 aa31.36■■■□□ 2.61
SMAD1-214ENST00000514831 BCS1LQ9Y276 419 aa31.36■■■□□ 2.61
SMAD1-214ENST00000514831 A0A0G2JLW4 131 aa31.35■■■□□ 2.61
SMAD1-214ENST00000514831 EIF4G2P78344 907 aaKnown RBP eCLIP31.34■■■□□ 2.61
SMAD1-214ENST00000514831 AEBP1Q8IUX7 1158 aa31.33■■■□□ 2.61
SMAD1-214ENST00000514831 PARP3Q9Y6F1 533 aa31.33■■■□□ 2.61
SMAD1-214ENST00000514831 MTHFSP49914 203 aa31.32■■■□□ 2.6
SMAD1-214ENST00000514831 C1orf141Q5JVX7 400 aa31.32■■■□□ 2.6
SMAD1-214ENST00000514831 HSPA5P11021 654 aaKnown RBP31.31■■■□□ 2.6
SMAD1-214ENST00000514831 DPEP1P16444 411 aa31.31■■■□□ 2.6
SMAD1-214ENST00000514831 ADAMTS7Q9UKP4 1686 aa31.3■■■□□ 2.6
SMAD1-214ENST00000514831 PTCD1O75127 700 aaKnown RBP31.29■■■□□ 2.6
SMAD1-214ENST00000514831 CRKLP46109 303 aaKnown RBP31.28■■■□□ 2.6
SMAD1-214ENST00000514831 MORC1Q86VD1 984 aa31.28■■■□□ 2.6
SMAD1-214ENST00000514831 FCHSD2O94868 740 aa31.27■■■□□ 2.6
SMAD1-214ENST00000514831 USP42Q9H9J4 1324 aaKnown RBP31.26■■■□□ 2.6
SMAD1-214ENST00000514831 SULT6B1Q6IMI4 303 aa31.26■■■□□ 2.59
SMAD1-214ENST00000514831 ARHGAP27Q6ZUM4 889 aa31.26■■■□□ 2.59
SMAD1-214ENST00000514831 NFATC2IPQ8NCF5 419 aa31.26■■■□□ 2.59
SMAD1-214ENST00000514831 VIRMAQ69YN4 1812 aaKnown RBP31.26■■■□□ 2.59
SMAD1-214ENST00000514831 KCNA3P22001 575 aa31.24■■■□□ 2.59
SMAD1-214ENST00000514831 MRC1P22897 1456 aa31.23■■■□□ 2.59
SMAD1-214ENST00000514831 TOMM70O94826 608 aa31.23■■■□□ 2.59
SMAD1-214ENST00000514831 SRP68Q9UHB9 627 aaKnown RBP31.23■■■□□ 2.59
SMAD1-214ENST00000514831 IL13P35225 146 aa31.22■■■□□ 2.59
SMAD1-214ENST00000514831 PCGF6Q9BYE7 350 aa31.22■■■□□ 2.59
SMAD1-214ENST00000514831 DDR1Q08345 913 aa31.21■■■□□ 2.59
SMAD1-214ENST00000514831 FKBP8Q14318 412 aa31.21■■■□□ 2.59
SMAD1-214ENST00000514831 APLP1P51693 650 aa31.2■■■□□ 2.59
SMAD1-214ENST00000514831 PIM2Q9P1W9 311 aa31.2■■■□□ 2.59
SMAD1-214ENST00000514831 INTS5Q6P9B9 1019 aaKnown RBP31.18■■■□□ 2.58
SMAD1-214ENST00000514831 NMRK2Q9NPI5 230 aa31.18■■■□□ 2.58
SMAD1-214ENST00000514831 KNSTRNQ9Y448 316 aa31.18■■■□□ 2.58
SMAD1-214ENST00000514831 AKAP4Q5JQC9 854 aa31.17■■■□□ 2.58
SMAD1-214ENST00000514831 C9orf131Q5VYM1 1079 aa31.16■■■□□ 2.58
SMAD1-214ENST00000514831 SBF1O95248 1867 aa31.16■■■□□ 2.58
SMAD1-214ENST00000514831 WDR90Q96KV7 1748 aa31.15■■■□□ 2.58
SMAD1-214ENST00000514831 DALRD3Q5D0E6 543 aaKnown RBP31.15■■■□□ 2.58
SMAD1-214ENST00000514831 SLC52A2Q9HAB3 445 aa31.15■■■□□ 2.58
SMAD1-214ENST00000514831 NRXN2Q9P2S2 1712 aa31.15■■■□□ 2.58
SMAD1-214ENST00000514831 AFDNP55196 1824 aaKnown RBP31.14■■■□□ 2.58
SMAD1-214ENST00000514831 KCPQ6ZWJ8 1503 aa31.14■■■□□ 2.58
SMAD1-214ENST00000514831 POLRMTO00411 1230 aaKnown RBP31.14■■■□□ 2.58
SMAD1-214ENST00000514831 SOS1Q07889 1333 aaPredicted RBP31.14■■■□□ 2.58
SMAD1-214ENST00000514831 TNRC6CQ9HCJ0 1690 aaKnown RBP31.13■■■□□ 2.57
SMAD1-214ENST00000514831 DLEC1Q9Y238 1755 aa31.13■■■□□ 2.57
SMAD1-214ENST00000514831 DNAJC10Q8IXB1 793 aa31.13■■■□□ 2.57
SMAD1-214ENST00000514831 TM4SF1P30408 202 aa31.12■■■□□ 2.57
SMAD1-214ENST00000514831 AMER1Q5JTC6 1135 aaPredicted RBP31.12■■■□□ 2.57
SMAD1-214ENST00000514831 UBR2Q8IWV8 1755 aa31.12■■■□□ 2.57
SMAD1-214ENST00000514831 CHRNA5P30532 468 aa31.1■■■□□ 2.57
SMAD1-214ENST00000514831 RBM46Q8TBY0 533 aaKnown RBP31.1■■■□□ 2.57
SMAD1-214ENST00000514831 ZPR1O75312 459 aa31.09■■■□□ 2.57
SMAD1-214ENST00000514831 USPL1Q5W0Q7 1092 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms