RNA–Protein interactions for RNA: ENST00000514636.1

LEMD2-213, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-213ENST00000514636 HSP90AB2PQ58FF8 381 aa20.69■□□□□ 0.9
LEMD2-213ENST00000514636 KDRP35968 1356 aa20.68■□□□□ 0.9
LEMD2-213ENST00000514636 GNPATO15228 680 aa20.67■□□□□ 0.9
LEMD2-213ENST00000514636 KCNA3P22001 575 aa20.67■□□□□ 0.9
LEMD2-213ENST00000514636 NLGN1Q8N2Q7 840 aa20.67■□□□□ 0.9
LEMD2-213ENST00000514636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.96e-9■□□□□ 11.1
LEMD2-213ENST00000514636 BCS1LQ9Y276 419 aa20.67■□□□□ 0.9
LEMD2-213ENST00000514636 C4AP0C0L4 1744 aa20.67■□□□□ 0.9
LEMD2-213ENST00000514636 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
LEMD2-213ENST00000514636 HTRA3P83110 453 aa20.66■□□□□ 0.9
LEMD2-213ENST00000514636 TONSLQ96HA7 1378 aa20.65■□□□□ 0.9
LEMD2-213ENST00000514636 SLC24A1O60721 1099 aa20.64■□□□□ 0.89
LEMD2-213ENST00000514636 DPEP1P16444 411 aa20.64■□□□□ 0.89
LEMD2-213ENST00000514636 ADRA2BP18089 450 aa20.64■□□□□ 0.89
LEMD2-213ENST00000514636 ARHGAP27Q6ZUM4 889 aa20.64■□□□□ 0.89
LEMD2-213ENST00000514636 TNS4Q8IZW8 715 aa20.64■□□□□ 0.89
LEMD2-213ENST00000514636 ASAP1Q9ULH1 1129 aa20.64■□□□□ 0.89
LEMD2-213ENST00000514636 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.89
LEMD2-213ENST00000514636 C9orf131Q5VYM1 1079 aa20.63■□□□□ 0.89
LEMD2-213ENST00000514636 ANKRD26Q9UPS8 1709 aa20.63■□□□□ 0.89
LEMD2-213ENST00000514636 TMF1P82094 1093 aa20.62■□□□□ 0.89
LEMD2-213ENST00000514636 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
LEMD2-213ENST00000514636 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
LEMD2-213ENST00000514636 KCPQ6ZWJ8 1503 aa20.62■□□□□ 0.89
LEMD2-213ENST00000514636 KDM2BQ8NHM5 1336 aa20.61■□□□□ 0.89
LEMD2-213ENST00000514636 GYS1P13807 737 aa20.61■□□□□ 0.89
LEMD2-213ENST00000514636 ATP6V1AP38606 617 aa20.61■□□□□ 0.89
LEMD2-213ENST00000514636 RC3H1Q5TC82 1133 aaKnown RBP20.61■□□□□ 0.89
LEMD2-213ENST00000514636 TMOD3Q9NYL9 352 aa20.61■□□□□ 0.89
LEMD2-213ENST00000514636 COL5A3P25940 1745 aaPredicted RBP20.61■□□□□ 0.89
LEMD2-213ENST00000514636 FCHSD2O94868 740 aa20.6■□□□□ 0.89
LEMD2-213ENST00000514636 NEUROD1Q13562 356 aa20.6■□□□□ 0.89
LEMD2-213ENST00000514636 ATG3Q9NT62 314 aa20.6■□□□□ 0.89
LEMD2-213ENST00000514636 CCDC87Q9NVE4 849 aa20.6■□□□□ 0.89
LEMD2-213ENST00000514636 SPG7Q9UQ90 795 aa20.6■□□□□ 0.89
LEMD2-213ENST00000514636 KDM6AO15550 1401 aaPredicted RBP20.6■□□□□ 0.89
LEMD2-213ENST00000514636 TRAPPC3LQ5T215 181 aa20.59■□□□□ 0.89
LEMD2-213ENST00000514636 C16orf71Q8IYS4 520 aaPredicted RBP20.59■□□□□ 0.89
LEMD2-213ENST00000514636 SLC4A9Q96Q91 983 aa20.59■□□□□ 0.89
LEMD2-213ENST00000514636 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
LEMD2-213ENST00000514636 CNTNAP4Q9C0A0 1308 aa20.58■□□□□ 0.89
LEMD2-213ENST00000514636 ZC3H4Q9UPT8 1303 aaKnown RBP20.58■□□□□ 0.89
LEMD2-213ENST00000514636 ARHGEF1Q92888 912 aaKnown RBP20.58■□□□□ 0.89
LEMD2-213ENST00000514636 SBF1O95248 1867 aa20.57■□□□□ 0.88
LEMD2-213ENST00000514636 PHKG2P15735 406 aa20.57■□□□□ 0.88
LEMD2-213ENST00000514636 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
LEMD2-213ENST00000514636 ST20-MTHFSA0A0A6YYL1 179 aa20.56■□□□□ 0.88
LEMD2-213ENST00000514636 SMC1BQ8NDV3 1235 aa20.56■□□□□ 0.88
LEMD2-213ENST00000514636 PIM2Q9P1W9 311 aa20.56■□□□□ 0.88
LEMD2-213ENST00000514636 RPS6KA4O75676 772 aa20.55■□□□□ 0.88
LEMD2-213ENST00000514636 CAPN15O75808 1086 aa20.55■□□□□ 0.88
LEMD2-213ENST00000514636 WASHC2AQ641Q2 1341 aa20.54■□□□□ 0.88
LEMD2-213ENST00000514636 IFNL2Q8IZJ0 200 aa20.54■□□□□ 0.88
LEMD2-213ENST00000514636 EMILIN1Q9Y6C2 1016 aa20.54■□□□□ 0.88
LEMD2-213ENST00000514636 MYH14Q7Z406 1995 aaKnown RBP20.54■□□□□ 0.88
LEMD2-213ENST00000514636 DALRD3Q5D0E6 543 aaKnown RBP20.53■□□□□ 0.88
LEMD2-213ENST00000514636 RRAGCQ9HB90 399 aa20.53■□□□□ 0.88
LEMD2-213ENST00000514636 RNF181Q9P0P0 153 aa20.53■□□□□ 0.88
LEMD2-213ENST00000514636 PARP3Q9Y6F1 533 aa20.53■□□□□ 0.88
LEMD2-213ENST00000514636 EYA1Q99502 592 aa20.52■□□□□ 0.88
LEMD2-213ENST00000514636 HSPA1AP0DMV8 641 aaKnown RBP20.51■□□□□ 0.87
LEMD2-213ENST00000514636 HSPA1BP0DMV9 641 aaKnown RBP20.51■□□□□ 0.87
LEMD2-213ENST00000514636 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
LEMD2-213ENST00000514636 ADAMTS7Q9UKP4 1686 aa20.5■□□□□ 0.87
LEMD2-213ENST00000514636 RFC4P35249 363 aa20.49■□□□□ 0.87
LEMD2-213ENST00000514636 DDR1Q08345 913 aa20.48■□□□□ 0.87
LEMD2-213ENST00000514636 CARD14Q9BXL6 1004 aa20.47■□□□□ 0.87
LEMD2-213ENST00000514636 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
LEMD2-213ENST00000514636 GLTPD2A6NH11 291 aa20.45■□□□□ 0.86
LEMD2-213ENST00000514636 VEGFAP15692 232 aaPredicted RBP20.45■□□□□ 0.86
LEMD2-213ENST00000514636 TM4SF1P30408 202 aa20.45■□□□□ 0.86
LEMD2-213ENST00000514636 SLC34A2O95436 690 aa20.44■□□□□ 0.86
LEMD2-213ENST00000514636 FKBP8Q14318 412 aa20.44■□□□□ 0.86
LEMD2-213ENST00000514636 POLRMTO00411 1230 aaKnown RBP20.43■□□□□ 0.86
LEMD2-213ENST00000514636 CHRNA5P30532 468 aa20.43■□□□□ 0.86
LEMD2-213ENST00000514636 NRXN2Q9P2S2 1712 aa20.43■□□□□ 0.86
LEMD2-213ENST00000514636 DLEC1Q9Y238 1755 aa20.42■□□□□ 0.86
LEMD2-213ENST00000514636 LMNB1P20700 586 aa20.42■□□□□ 0.86
LEMD2-213ENST00000514636 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
LEMD2-213ENST00000514636 TJP1Q07157 1748 aa20.41■□□□□ 0.86
LEMD2-213ENST00000514636 POTECB2RU33 542 aa20.41■□□□□ 0.86
LEMD2-213ENST00000514636 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
LEMD2-213ENST00000514636 CRKLP46109 303 aaKnown RBP20.41■□□□□ 0.86
LEMD2-213ENST00000514636 POLKQ9UBT6 870 aa20.41■□□□□ 0.86
LEMD2-213ENST00000514636 SRP68Q9UHB9 627 aaKnown RBP20.41■□□□□ 0.86
LEMD2-213ENST00000514636 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.85
LEMD2-213ENST00000514636 RASSF7Q02833 373 aa20.38■□□□□ 0.85
LEMD2-213ENST00000514636 EIF4A2Q14240 407 aaKnown RBP20.38■□□□□ 0.85
LEMD2-213ENST00000514636 CDCA8Q53HL2 280 aa20.37■□□□□ 0.85
LEMD2-213ENST00000514636 INTS5Q6P9B9 1019 aaKnown RBP20.37■□□□□ 0.85
LEMD2-213ENST00000514636 NFKBIEO00221 500 aa20.35■□□□□ 0.85
LEMD2-213ENST00000514636 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
LEMD2-213ENST00000514636 PRDM10Q9NQV6 1147 aa20.35■□□□□ 0.85
LEMD2-213ENST00000514636 CREBZFQ9NS37 354 aa20.35■□□□□ 0.85
LEMD2-213ENST00000514636 AFDNP55196 1824 aaKnown RBP20.34■□□□□ 0.85
LEMD2-213ENST00000514636 CABP4P57796 275 aa20.33■□□□□ 0.85
LEMD2-213ENST00000514636 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
LEMD2-213ENST00000514636 AMOTQ4VCS5 1084 aa20.32■□□□□ 0.84
LEMD2-213ENST00000514636 PTCD1O75127 700 aaKnown RBP20.31■□□□□ 0.84
LEMD2-213ENST00000514636 PLEKHO1Q53GL0 409 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms