RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 PHF14O94880 888 aa17.07■□□□□ 0.32
YIPF3-217ENST00000514627 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
YIPF3-217ENST00000514627 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
YIPF3-217ENST00000514627 TAF1LQ8IZX4 1826 aa17.06■□□□□ 0.32
YIPF3-217ENST00000514627 GNPATO15228 680 aa17.06■□□□□ 0.32
YIPF3-217ENST00000514627 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
YIPF3-217ENST00000514627 MTHFSP49914 203 aa17.05■□□□□ 0.32
YIPF3-217ENST00000514627 CABP4P57796 275 aa17.05■□□□□ 0.32
YIPF3-217ENST00000514627 C1orf141Q5JVX7 400 aa17.05■□□□□ 0.32
YIPF3-217ENST00000514627 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
YIPF3-217ENST00000514627 KDRP35968 1356 aa17.04■□□□□ 0.32
YIPF3-217ENST00000514627 CHD4Q14839 1912 aa17.04■□□□□ 0.32
YIPF3-217ENST00000514627 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.322e-8■■■■□ 22.5
YIPF3-217ENST00000514627 IL13P35225 146 aa17.04■□□□□ 0.32
YIPF3-217ENST00000514627 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
YIPF3-217ENST00000514627 AEBP1Q8IUX7 1158 aa17.04■□□□□ 0.32
YIPF3-217ENST00000514627 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
YIPF3-217ENST00000514627 TRAPPC3LQ5T215 181 aa17.03■□□□□ 0.32
YIPF3-217ENST00000514627 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
YIPF3-217ENST00000514627 RTCBQ9Y3I0 505 aaKnown RBP17.03■□□□□ 0.32
YIPF3-217ENST00000514627 ADRA2BP18089 450 aa17.02■□□□□ 0.32
YIPF3-217ENST00000514627 SMIM5Q71RC9 77 aa17.02■□□□□ 0.32
YIPF3-217ENST00000514627 SLC4A9Q96Q91 983 aa17.02■□□□□ 0.32
YIPF3-217ENST00000514627 PER1O15534 1290 aaPredicted RBP17.01■□□□□ 0.31
YIPF3-217ENST00000514627 NLGN1Q8N2Q7 840 aa17.01■□□□□ 0.31
YIPF3-217ENST00000514627 KDM6AO15550 1401 aaPredicted RBP17.01■□□□□ 0.31
YIPF3-217ENST00000514627 CNTNAP4Q9C0A0 1308 aa17■□□□□ 0.31
YIPF3-217ENST00000514627 UBR3Q6ZT12 1888 aa17■□□□□ 0.31
YIPF3-217ENST00000514627 NFATC2IPQ8NCF5 419 aa17■□□□□ 0.31
YIPF3-217ENST00000514627 RPS6KA4O75676 772 aa16.99■□□□□ 0.31
YIPF3-217ENST00000514627 C1QTNF8P60827 252 aa16.98■□□□□ 0.31
YIPF3-217ENST00000514627 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
YIPF3-217ENST00000514627 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
YIPF3-217ENST00000514627 MMP10P09238 476 aa16.97■□□□□ 0.31
YIPF3-217ENST00000514627 RFC4P35249 363 aa16.97■□□□□ 0.31
YIPF3-217ENST00000514627 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
YIPF3-217ENST00000514627 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.31
YIPF3-217ENST00000514627 NPC1L1Q9UHC9 1359 aa16.95■□□□□ 0.3
YIPF3-217ENST00000514627 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
YIPF3-217ENST00000514627 GIGYF1O75420 1035 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-217ENST00000514627 GYS1P13807 737 aa16.94■□□□□ 0.3
YIPF3-217ENST00000514627 TGFB2P61812 414 aa16.94■□□□□ 0.3
YIPF3-217ENST00000514627 SLC52A2Q9HAB3 445 aa16.94■□□□□ 0.3
YIPF3-217ENST00000514627 CRKLP46109 303 aaKnown RBP16.93■□□□□ 0.3
YIPF3-217ENST00000514627 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
YIPF3-217ENST00000514627 HMOX1P09601 288 aa16.92■□□□□ 0.3
YIPF3-217ENST00000514627 CCDC87Q9NVE4 849 aa16.92■□□□□ 0.3
YIPF3-217ENST00000514627 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
YIPF3-217ENST00000514627 ZEB1P37275 1124 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-217ENST00000514627 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
YIPF3-217ENST00000514627 PARP3Q9Y6F1 533 aa16.91■□□□□ 0.3
YIPF3-217ENST00000514627 MTHFSDQ2M296 383 aaKnown RBP16.9■□□□□ 0.3
YIPF3-217ENST00000514627 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
YIPF3-217ENST00000514627 SENP3-EIF4A1A0A087X0R7 540 aa16.89■□□□□ 0.29
YIPF3-217ENST00000514627 INTS5Q6P9B9 1019 aaKnown RBP16.89■□□□□ 0.29
YIPF3-217ENST00000514627 C10orf71Q711Q0 1435 aa16.88■□□□□ 0.29
YIPF3-217ENST00000514627 COL5A3P25940 1745 aaPredicted RBP16.88■□□□□ 0.29
YIPF3-217ENST00000514627 GPBP1L1Q9HC44 474 aaPredicted RBP16.88■□□□□ 0.29
YIPF3-217ENST00000514627 USP42Q9H9J4 1324 aaKnown RBP16.88■□□□□ 0.29
YIPF3-217ENST00000514627 ADCY9O60503 1353 aa16.88■□□□□ 0.29
YIPF3-217ENST00000514627 PXDNLA1KZ92 1463 aa16.87■□□□□ 0.29
YIPF3-217ENST00000514627 A0A0G2JLW4 131 aa16.87■□□□□ 0.29
YIPF3-217ENST00000514627 DNAJC10Q8IXB1 793 aa16.87■□□□□ 0.29
YIPF3-217ENST00000514627 VSIG10Q8N0Z9 540 aa16.87■□□□□ 0.29
YIPF3-217ENST00000514627 WWC3Q9ULE0 1092 aa16.87■□□□□ 0.29
YIPF3-217ENST00000514627 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
YIPF3-217ENST00000514627 MRC1P22897 1456 aa16.86■□□□□ 0.29
YIPF3-217ENST00000514627 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
YIPF3-217ENST00000514627 ZPR1O75312 459 aa16.85■□□□□ 0.29
YIPF3-217ENST00000514627 DPEP1P16444 411 aa16.85■□□□□ 0.29
YIPF3-217ENST00000514627 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
YIPF3-217ENST00000514627 FKBP8Q14318 412 aa16.85■□□□□ 0.29
YIPF3-217ENST00000514627 GAS2L2Q8NHY3 880 aa16.85■□□□□ 0.29
YIPF3-217ENST00000514627 SRP68Q9UHB9 627 aaKnown RBP16.85■□□□□ 0.29
YIPF3-217ENST00000514627 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
YIPF3-217ENST00000514627 SCN11AQ9UI33 1791 aa16.84■□□□□ 0.29
YIPF3-217ENST00000514627 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
YIPF3-217ENST00000514627 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
YIPF3-217ENST00000514627 TM4SF1P30408 202 aa16.84■□□□□ 0.29
YIPF3-217ENST00000514627 SOS1Q07889 1333 aaPredicted RBP16.84■□□□□ 0.29
YIPF3-217ENST00000514627 GNAT3A8MTJ3 354 aa16.83■□□□□ 0.28
YIPF3-217ENST00000514627 C4AP0C0L4 1744 aa16.83■□□□□ 0.28
YIPF3-217ENST00000514627 CFAP53Q96M91 514 aa16.83■□□□□ 0.28
YIPF3-217ENST00000514627 KIF13BQ9NQT8 1826 aa16.82■□□□□ 0.28
YIPF3-217ENST00000514627 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
YIPF3-217ENST00000514627 FCHSD2O94868 740 aa16.82■□□□□ 0.28
YIPF3-217ENST00000514627 STARD3NLO95772 234 aa16.82■□□□□ 0.28
YIPF3-217ENST00000514627 KCNA3P22001 575 aa16.82■□□□□ 0.28
YIPF3-217ENST00000514627 DDR1Q08345 913 aa16.82■□□□□ 0.28
YIPF3-217ENST00000514627 TEFQ10587 303 aa16.82■□□□□ 0.28
YIPF3-217ENST00000514627 TTC5Q8N0Z6 440 aa16.82■□□□□ 0.28
YIPF3-217ENST00000514627 PIM2Q9P1W9 311 aa16.82■□□□□ 0.28
YIPF3-217ENST00000514627 NARFQ9UHQ1 456 aa16.82■□□□□ 0.28
YIPF3-217ENST00000514627 USPL1Q5W0Q7 1092 aa16.81■□□□□ 0.28
YIPF3-217ENST00000514627 ARHGAP27Q6ZUM4 889 aa16.81■□□□□ 0.28
YIPF3-217ENST00000514627 TEX13AQ9BXU3 409 aaPredicted RBP16.81■□□□□ 0.28
YIPF3-217ENST00000514627 TJP1Q07157 1748 aa16.81■□□□□ 0.28
YIPF3-217ENST00000514627 CEP350Q5VT06 3117 aa16.8■□□□□ 0.28
YIPF3-217ENST00000514627 POLRMTO00411 1230 aaKnown RBP16.8■□□□□ 0.28
YIPF3-217ENST00000514627 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms