RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
DDR1-276ENST00000514534 NLGN1Q8N2Q7 840 aa14.22□□□□□ -0.13
DDR1-276ENST00000514534 DNAJC5GQ8N7S2 189 aa14.22□□□□□ -0.13
DDR1-276ENST00000514534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
DDR1-276ENST00000514534 BRCA1P38398 1863 aaKnown RBP14.21□□□□□ -0.13
DDR1-276ENST00000514534 TRAPPC3LQ5T215 181 aa14.21□□□□□ -0.13
DDR1-276ENST00000514534 C16orf71Q8IYS4 520 aaPredicted RBP14.21□□□□□ -0.13
DDR1-276ENST00000514534 IFNL2Q8IZJ0 200 aa14.21□□□□□ -0.13
DDR1-276ENST00000514534 CCDC87Q9NVE4 849 aa14.21□□□□□ -0.13
DDR1-276ENST00000514534 RTCBQ9Y3I0 505 aaKnown RBP14.21□□□□□ -0.13
DDR1-276ENST00000514534 C10orf71Q711Q0 1435 aa14.21□□□□□ -0.13
DDR1-276ENST00000514534 PLEKHG2Q9H7P9 1386 aa14.21□□□□□ -0.14
DDR1-276ENST00000514534 ARFGEF1Q9Y6D6 1849 aa14.2□□□□□ -0.14
DDR1-276ENST00000514534 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
DDR1-276ENST00000514534 ITPK1Q13572 414 aa14.2□□□□□ -0.14
DDR1-276ENST00000514534 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
DDR1-276ENST00000514534 ARHGAP27Q6ZUM4 889 aa14.2□□□□□ -0.14
DDR1-276ENST00000514534 RBM46Q8TBY0 533 aaKnown RBP14.2□□□□□ -0.14
DDR1-276ENST00000514534 ASAP1Q9ULH1 1129 aa14.2□□□□□ -0.14
DDR1-276ENST00000514534 ANKRD26Q9UPS8 1709 aa14.2□□□□□ -0.14
DDR1-276ENST00000514534 ZNF831Q5JPB2 1677 aa14.2□□□□□ -0.14
DDR1-276ENST00000514534 C4AP0C0L4 1744 aa14.19□□□□□ -0.14
DDR1-276ENST00000514534 EMILIN1Q9Y6C2 1016 aa14.19□□□□□ -0.14
DDR1-276ENST00000514534 A0A0G2JLW4 131 aa14.18□□□□□ -0.14
DDR1-276ENST00000514534 FCHSD2O94868 740 aa14.18□□□□□ -0.14
DDR1-276ENST00000514534 NMRK2Q9NPI5 230 aa14.18□□□□□ -0.14
DDR1-276ENST00000514534 PARP3Q9Y6F1 533 aa14.18□□□□□ -0.14
DDR1-276ENST00000514534 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
DDR1-276ENST00000514534 PHKG2P15735 406 aa14.17□□□□□ -0.14
DDR1-276ENST00000514534 FSTL1Q12841 308 aa14.17□□□□□ -0.14
DDR1-276ENST00000514534 KLRG1Q96E93 195 aa14.17□□□□□ -0.14
DDR1-276ENST00000514534 ATG3Q9NT62 314 aa14.17□□□□□ -0.14
DDR1-276ENST00000514534 COL5A3P25940 1745 aaPredicted RBP14.17□□□□□ -0.14
DDR1-276ENST00000514534 WASHC2AQ641Q2 1341 aa14.16□□□□□ -0.14
DDR1-276ENST00000514534 DPEP1P16444 411 aa14.16□□□□□ -0.14
DDR1-276ENST00000514534 RC3H1Q5TC82 1133 aaKnown RBP14.16□□□□□ -0.14
DDR1-276ENST00000514534 EYA1Q99502 592 aa14.16□□□□□ -0.14
DDR1-276ENST00000514534 KDRP35968 1356 aa14.16□□□□□ -0.14
DDR1-276ENST00000514534 KDM2BQ8NHM5 1336 aa14.15□□□□□ -0.14
DDR1-276ENST00000514534 TNRC6CQ9HCJ0 1690 aaKnown RBP14.15□□□□□ -0.14
DDR1-276ENST00000514534 RFC4P35249 363 aa14.15□□□□□ -0.14
DDR1-276ENST00000514534 C9orf131Q5VYM1 1079 aa14.15□□□□□ -0.14
DDR1-276ENST00000514534 ARHGEF1Q92888 912 aaKnown RBP14.15□□□□□ -0.14
DDR1-276ENST00000514534 CNTNAP4Q9C0A0 1308 aa14.15□□□□□ -0.15
DDR1-276ENST00000514534 RPS6KA4O75676 772 aa14.14□□□□□ -0.15
DDR1-276ENST00000514534 HSP90AB1P08238 724 aaKnown RBP14.14□□□□□ -0.15
DDR1-276ENST00000514534 GYS1P13807 737 aa14.14□□□□□ -0.15
DDR1-276ENST00000514534 JMYQ8N9B5 988 aa14.14□□□□□ -0.15
DDR1-276ENST00000514534 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
DDR1-276ENST00000514534 PIM2Q9P1W9 311 aa14.14□□□□□ -0.15
DDR1-276ENST00000514534 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
DDR1-276ENST00000514534 SBF1O95248 1867 aa14.12□□□□□ -0.15
DDR1-276ENST00000514534 KCPQ6ZWJ8 1503 aa14.12□□□□□ -0.15
DDR1-276ENST00000514534 MYH14Q7Z406 1995 aaKnown RBP14.12□□□□□ -0.15
DDR1-276ENST00000514534 KCNA3P22001 575 aa14.11□□□□□ -0.15
DDR1-276ENST00000514534 DALRD3Q5D0E6 543 aaKnown RBP14.11□□□□□ -0.15
DDR1-276ENST00000514534 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
DDR1-276ENST00000514534 SLC4A9Q96Q91 983 aa14.11□□□□□ -0.15
DDR1-276ENST00000514534 CARD14Q9BXL6 1004 aa14.11□□□□□ -0.15
DDR1-276ENST00000514534 RNF181Q9P0P0 153 aa14.11□□□□□ -0.15
DDR1-276ENST00000514534 COL13A1Q5TAT6 717 aaPredicted RBP14.1□□□□□ -0.15
DDR1-276ENST00000514534 HTRA3P83110 453 aa14.09□□□□□ -0.15
DDR1-276ENST00000514534 SMC1BQ8NDV3 1235 aa14.09□□□□□ -0.15
DDR1-276ENST00000514534 RRAGCQ9HB90 399 aa14.09□□□□□ -0.15
DDR1-276ENST00000514534 POLKQ9UBT6 870 aa14.09□□□□□ -0.15
DDR1-276ENST00000514534 ZC3H4Q9UPT8 1303 aaKnown RBP14.09□□□□□ -0.15
DDR1-276ENST00000514534 CABP4P57796 275 aa14.08□□□□□ -0.16
DDR1-276ENST00000514534 PLEKHO1Q53GL0 409 aaPredicted RBP14.08□□□□□ -0.16
DDR1-276ENST00000514534 TNS4Q8IZW8 715 aa14.08□□□□□ -0.16
DDR1-276ENST00000514534 CAPN15O75808 1086 aa14.07□□□□□ -0.16
DDR1-276ENST00000514534 EIF4A2Q14240 407 aaKnown RBP14.07□□□□□ -0.16
DDR1-276ENST00000514534 AMOTQ4VCS5 1084 aa14.07□□□□□ -0.16
DDR1-276ENST00000514534 PRELPP51888 382 aa14.06□□□□□ -0.16
DDR1-276ENST00000514534 USP42Q9H9J4 1324 aaKnown RBP14.06□□□□□ -0.16
DDR1-276ENST00000514534 CRKLP46109 303 aaKnown RBP14.05□□□□□ -0.16
DDR1-276ENST00000514534 FKBP8Q14318 412 aa14.05□□□□□ -0.16
DDR1-276ENST00000514534 KDM6AO15550 1401 aaPredicted RBP14.05□□□□□ -0.16
DDR1-276ENST00000514534 TJP1Q07157 1748 aa14.04□□□□□ -0.16
DDR1-276ENST00000514534 PTCD1O75127 700 aaKnown RBP14.04□□□□□ -0.16
DDR1-276ENST00000514534 CHRNA5P30532 468 aa14.04□□□□□ -0.16
DDR1-276ENST00000514534 MTHFSP49914 203 aa14.04□□□□□ -0.16
DDR1-276ENST00000514534 DDR1Q08345 913 aa14.04□□□□□ -0.16
DDR1-276ENST00000514534 C1orf141Q5JVX7 400 aa14.04□□□□□ -0.16
DDR1-276ENST00000514534 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
DDR1-276ENST00000514534 SRP68Q9UHB9 627 aaKnown RBP14.04□□□□□ -0.16
DDR1-276ENST00000514534 CCDC88AQ3V6T2 1871 aa14.04□□□□□ -0.16
DDR1-276ENST00000514534 AFDNP55196 1824 aaKnown RBP14.02□□□□□ -0.16
DDR1-276ENST00000514534 DLEC1Q9Y238 1755 aa14.02□□□□□ -0.16
DDR1-276ENST00000514534 POLRMTO00411 1230 aaKnown RBP14.02□□□□□ -0.17
DDR1-276ENST00000514534 ZPR1O75312 459 aa14.02□□□□□ -0.17
DDR1-276ENST00000514534 VEGFAP15692 232 aaPredicted RBP14.02□□□□□ -0.17
DDR1-276ENST00000514534 SCN11AQ9UI33 1791 aa14.01□□□□□ -0.17
DDR1-276ENST00000514534 GLTPD2A6NH11 291 aa14.01□□□□□ -0.17
DDR1-276ENST00000514534 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
DDR1-276ENST00000514534 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
DDR1-276ENST00000514534 LMNB1P20700 586 aa14.01□□□□□ -0.17
DDR1-276ENST00000514534 TM4SF1P30408 202 aa14.01□□□□□ -0.17
DDR1-276ENST00000514534 TNNT2P45379 298 aaPredicted RBP14.01□□□□□ -0.17
DDR1-276ENST00000514534 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
DDR1-276ENST00000514534 NFATC2IPQ8NCF5 419 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms