RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 GTF2IP78347 998 aa11.12□□□□□ -0.63
PDE4D-221ENST00000514231 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
PDE4D-221ENST00000514231 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
PDE4D-221ENST00000514231 TMEM229AB2RXF0 380 aa11.11□□□□□ -0.63
PDE4D-221ENST00000514231 SMTNP53814 917 aa11.11□□□□□ -0.63
PDE4D-221ENST00000514231 TLR1Q15399 786 aa11.11□□□□□ -0.63
PDE4D-221ENST00000514231 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
PDE4D-221ENST00000514231 TRIM22Q8IYM9 498 aa11.11□□□□□ -0.63
PDE4D-221ENST00000514231 CALR3Q96L12 384 aaKnown RBP11.11□□□□□ -0.63
PDE4D-221ENST00000514231 CDC14CA4D256 554 aa11.1□□□□□ -0.63
PDE4D-221ENST00000514231 CUEDC1Q9NWM3 386 aaPredicted RBP11.1□□□□□ -0.63
PDE4D-221ENST00000514231 USP17L3A6NCW0 530 aa11.09□□□□□ -0.63
PDE4D-221ENST00000514231 USP17L4A6NCW7 530 aa11.09□□□□□ -0.63
PDE4D-221ENST00000514231 H7C1W4 665 aa11.09□□□□□ -0.63
PDE4D-221ENST00000514231 F11P03951 625 aa11.09□□□□□ -0.63
PDE4D-221ENST00000514231 USP17L2Q6R6M4 530 aa11.09□□□□□ -0.63
PDE4D-221ENST00000514231 USP17L1Q7RTZ2 530 aa11.09□□□□□ -0.63
PDE4D-221ENST00000514231 RHBDD1Q8TEB9 315 aa11.09□□□□□ -0.63
PDE4D-221ENST00000514231 GAS2L1Q99501 681 aaPredicted RBP11.09□□□□□ -0.63
PDE4D-221ENST00000514231 TFIP11Q9UBB9 837 aaKnown RBP11.09□□□□□ -0.63
PDE4D-221ENST00000514231 BACH1O14867 736 aa11.08□□□□□ -0.64
PDE4D-221ENST00000514231 DBN1Q16643 649 aa11.08□□□□□ -0.64
PDE4D-221ENST00000514231 C4orf17Q53FE4 359 aa11.08□□□□□ -0.64
PDE4D-221ENST00000514231 RIPOR1Q6ZS17 1223 aa11.08□□□□□ -0.64
PDE4D-221ENST00000514231 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
PDE4D-221ENST00000514231 SERTAD1Q9UHV2 236 aa11.08□□□□□ -0.64
PDE4D-221ENST00000514231 A0A1B0GTH6 734 aa11.07□□□□□ -0.64
PDE4D-221ENST00000514231 CDK2AP1O14519 115 aa11.07□□□□□ -0.64
PDE4D-221ENST00000514231 ZBTB7BO15156 539 aaPredicted RBP11.07□□□□□ -0.64
PDE4D-221ENST00000514231 LORP23490 312 aaPredicted RBP11.07□□□□□ -0.64
PDE4D-221ENST00000514231 PHKA2P46019 1235 aa11.07□□□□□ -0.64
PDE4D-221ENST00000514231 ATP1A2P50993 1020 aa11.07□□□□□ -0.64
PDE4D-221ENST00000514231 MTFR1Q15390 333 aa11.07□□□□□ -0.64
PDE4D-221ENST00000514231 ZSCAN1Q8NBB4 408 aa11.07□□□□□ -0.64
PDE4D-221ENST00000514231 MKRN1Q9UHC7 482 aaKnown RBP11.07□□□□□ -0.64
PDE4D-221ENST00000514231 A6NJY4 79 aa11.06□□□□□ -0.64
PDE4D-221ENST00000514231 KRT76Q01546 638 aa11.06□□□□□ -0.64
PDE4D-221ENST00000514231 PSME1Q06323 249 aa11.06□□□□□ -0.64
PDE4D-221ENST00000514231 STK17AQ9UEE5 414 aa11.06□□□□□ -0.64
PDE4D-221ENST00000514231 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
PDE4D-221ENST00000514231 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-221ENST00000514231 FOXR1Q6PIV2 292 aa11.05□□□□□ -0.64
PDE4D-221ENST00000514231 ZNF837Q96EG3 531 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-221ENST00000514231 NIFKQ9BYG3 293 aaKnown RBP11.05□□□□□ -0.64
PDE4D-221ENST00000514231 PPP1R12CQ9BZL4 782 aa11.05□□□□□ -0.64
PDE4D-221ENST00000514231 ZNF777Q9ULD5 760 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-221ENST00000514231 CLDN10P78369 228 aa11.04□□□□□ -0.64
PDE4D-221ENST00000514231 LARGE2Q8N3Y3 721 aa11.04□□□□□ -0.64
PDE4D-221ENST00000514231 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
PDE4D-221ENST00000514231 CNTNAP3BQ96NU0 1288 aa11.04□□□□□ -0.64
PDE4D-221ENST00000514231 CNTNAP3Q9BZ76 1288 aa11.04□□□□□ -0.64
PDE4D-221ENST00000514231 MAFBQ9Y5Q3 323 aaPredicted RBP11.04□□□□□ -0.64
PDE4D-221ENST00000514231 RNFT1Q5M7Z0 435 aa11.03□□□□□ -0.64
PDE4D-221ENST00000514231 OGFOD1Q8N543 542 aa11.03□□□□□ -0.64
PDE4D-221ENST00000514231 DNAAF2Q9NVR5 837 aaKnown RBP11.03□□□□□ -0.64
PDE4D-221ENST00000514231 ZNF358Q9NW07 568 aa11.03□□□□□ -0.64
PDE4D-221ENST00000514231 IQSEC3Q9UPP2 1182 aaPredicted RBP11.03□□□□□ -0.64
PDE4D-221ENST00000514231 CCDC102BQ68D86 513 aa11.02□□□□□ -0.65
PDE4D-221ENST00000514231 ZMYND15Q9H091 742 aa11.02□□□□□ -0.65
PDE4D-221ENST00000514231 MSX1P28360 303 aa11.01□□□□□ -0.65
PDE4D-221ENST00000514231 LBRQ14739 615 aaKnown RBP11.01□□□□□ -0.65
PDE4D-221ENST00000514231 ZNF295-AS1Q8N0V1 137 aa11.01□□□□□ -0.65
PDE4D-221ENST00000514231 NUCKS1Q9H1E3 243 aaKnown RBP11.01□□□□□ -0.65
PDE4D-221ENST00000514231 FAM181BA6NEQ2 426 aa11□□□□□ -0.65
PDE4D-221ENST00000514231 SCHIP1Q9P0W5 487 aaPredicted RBP11□□□□□ -0.65
PDE4D-221ENST00000514231 KIAA1024Q9UPX6 916 aa11□□□□□ -0.65
PDE4D-221ENST00000514231 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
PDE4D-221ENST00000514231 SIX5Q8N196 739 aa10.99□□□□□ -0.65
PDE4D-221ENST00000514231 PGBD3Q8N328 593 aa10.99□□□□□ -0.65
PDE4D-221ENST00000514231 TPCN2Q8NHX9 752 aa10.99□□□□□ -0.65
PDE4D-221ENST00000514231 C1orf216Q8TAB5 229 aa10.99□□□□□ -0.65
PDE4D-221ENST00000514231 GTPBP3Q969Y2 492 aaKnown RBP10.99□□□□□ -0.65
PDE4D-221ENST00000514231 GPAMQ9HCL2 828 aa10.99□□□□□ -0.65
PDE4D-221ENST00000514231 M0R2N6 131 aa10.98□□□□□ -0.65
PDE4D-221ENST00000514231 PLA2G4AP47712 749 aa10.98□□□□□ -0.65
PDE4D-221ENST00000514231 EPHA4P54764 986 aa10.98□□□□□ -0.65
PDE4D-221ENST00000514231 FOXK2Q01167 660 aa10.98□□□□□ -0.65
PDE4D-221ENST00000514231 TRERF1Q96PN7 1200 aa10.98□□□□□ -0.65
PDE4D-221ENST00000514231 DKK1O94907 266 aa10.97□□□□□ -0.65
PDE4D-221ENST00000514231 THBS1P07996 1170 aa10.97□□□□□ -0.65
PDE4D-221ENST00000514231 SLURP2P0DP57 97 aa10.97□□□□□ -0.65
PDE4D-221ENST00000514231 RASA1P20936 1047 aa10.97□□□□□ -0.65
PDE4D-221ENST00000514231 GAS6Q14393 721 aa10.97□□□□□ -0.65
PDE4D-221ENST00000514231 KANK4Q5T7N3 995 aaPredicted RBP10.97□□□□□ -0.65
PDE4D-221ENST00000514231 AIDAQ96BJ3 306 aa10.97□□□□□ -0.65
PDE4D-221ENST00000514231 CRISPLD1Q9H336 500 aa10.97□□□□□ -0.65
PDE4D-221ENST00000514231 CABP1Q9NZU7 370 aa10.97□□□□□ -0.65
PDE4D-221ENST00000514231 USP3Q9Y6I4 520 aa10.97□□□□□ -0.65
PDE4D-221ENST00000514231 LMOD1P29536 600 aaPredicted RBP10.96□□□□□ -0.65
PDE4D-221ENST00000514231 SRSF11Q05519 484 aaKnown RBP10.96□□□□□ -0.65
PDE4D-221ENST00000514231 TNS4Q8IZW8 715 aa10.96□□□□□ -0.65
PDE4D-221ENST00000514231 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.65
PDE4D-221ENST00000514231 RBM19Q9Y4C8 960 aaKnown RBP10.96□□□□□ -0.65
PDE4D-221ENST00000514231 GPR25O00155 361 aa10.95□□□□□ -0.66
PDE4D-221ENST00000514231 EFHC2Q5JST6 749 aa10.95□□□□□ -0.66
PDE4D-221ENST00000514231 LARP1Q6PKG0 1096 aaKnown RBP10.95□□□□□ -0.66
PDE4D-221ENST00000514231 RUBCNLQ9H714 662 aa10.95□□□□□ -0.66
PDE4D-221ENST00000514231 VRTNQ9H8Y1 702 aa10.95□□□□□ -0.66
PDE4D-221ENST00000514231 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
PDE4D-221ENST00000514231 UBAP2LQ14157 1087 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms