RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 C10orf71Q711Q0 1435 aa12.05□□□□□ -0.48
CAST-240ENST00000514055 TATP17735 454 aaPredicted RBP12.05□□□□□ -0.48
CAST-240ENST00000514055 RAPGEF4Q8WZA2 1011 aa12.05□□□□□ -0.48
CAST-240ENST00000514055 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
CAST-240ENST00000514055 KIF13BQ9NQT8 1826 aa12.04□□□□□ -0.48
CAST-240ENST00000514055 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
CAST-240ENST00000514055 KCNA3P22001 575 aa12.04□□□□□ -0.48
CAST-240ENST00000514055 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
CAST-240ENST00000514055 SIK1P57059 783 aa12.04□□□□□ -0.48
CAST-240ENST00000514055 RNF181Q9P0P0 153 aa12.04□□□□□ -0.48
CAST-240ENST00000514055 PCDH11XQ9BZA7 1347 aa12.04□□□□□ -0.48
CAST-240ENST00000514055 PCDH11YQ9BZA8 1340 aa12.04□□□□□ -0.48
CAST-240ENST00000514055 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
CAST-240ENST00000514055 NSD3Q9BZ95 1437 aa12.03□□□□□ -0.48
CAST-240ENST00000514055 COG3Q96JB2 828 aa12.03□□□□□ -0.48
CAST-240ENST00000514055 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
CAST-240ENST00000514055 PLEKHG2Q9H7P9 1386 aa12.03□□□□□ -0.48
CAST-240ENST00000514055 ITGB4P16144 1822 aa12.02□□□□□ -0.48
CAST-240ENST00000514055 SMC1BQ8NDV3 1235 aa12.02□□□□□ -0.49
CAST-240ENST00000514055 TERF2IPQ9NYB0 399 aa12.02□□□□□ -0.49
CAST-240ENST00000514055 ASAP1Q9ULH1 1129 aa12.02□□□□□ -0.49
CAST-240ENST00000514055 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
CAST-240ENST00000514055 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
CAST-240ENST00000514055 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
CAST-240ENST00000514055 HSP90AB2PQ58FF8 381 aa12.01□□□□□ -0.49
CAST-240ENST00000514055 POLR3GLQ9BT43 218 aa12.01□□□□□ -0.49
CAST-240ENST00000514055 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
CAST-240ENST00000514055 BRCA1P38398 1863 aaKnown RBP12□□□□□ -0.49
CAST-240ENST00000514055 HMGB2P26583 209 aaKnown RBP12□□□□□ -0.49
CAST-240ENST00000514055 DCAF5Q96JK2 942 aa12□□□□□ -0.49
CAST-240ENST00000514055 KIF20BQ96Q89 1820 aa12□□□□□ -0.49
CAST-240ENST00000514055 GYS1P13807 737 aa11.99□□□□□ -0.49
CAST-240ENST00000514055 RASSF7Q02833 373 aa11.99□□□□□ -0.49
CAST-240ENST00000514055 TRAPPC3LQ5T215 181 aa11.99□□□□□ -0.49
CAST-240ENST00000514055 RTL1A6NKG5 1358 aa11.99□□□□□ -0.49
CAST-240ENST00000514055 CHRNA5P30532 468 aa11.98□□□□□ -0.49
CAST-240ENST00000514055 NLGN1Q8N2Q7 840 aa11.98□□□□□ -0.49
CAST-240ENST00000514055 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
CAST-240ENST00000514055 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
CAST-240ENST00000514055 GGNBP2Q9H3C7 697 aa11.98□□□□□ -0.49
CAST-240ENST00000514055 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
CAST-240ENST00000514055 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
CAST-240ENST00000514055 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
CAST-240ENST00000514055 KIF7Q2M1P5 1343 aa11.97□□□□□ -0.49
CAST-240ENST00000514055 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
CAST-240ENST00000514055 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
CAST-240ENST00000514055 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
CAST-240ENST00000514055 RTCBQ9Y3I0 505 aaKnown RBP11.97□□□□□ -0.49
CAST-240ENST00000514055 PARP3Q9Y6F1 533 aa11.97□□□□□ -0.49
CAST-240ENST00000514055 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
CAST-240ENST00000514055 TNRC6CQ9HCJ0 1690 aaKnown RBP11.97□□□□□ -0.49
CAST-240ENST00000514055 SMG6Q86US8 1419 aaKnown RBP11.96□□□□□ -0.49
CAST-240ENST00000514055 FOXN1O15353 648 aa11.96□□□□□ -0.49
CAST-240ENST00000514055 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.49
CAST-240ENST00000514055 SBF1O95248 1867 aa11.95□□□□□ -0.5
CAST-240ENST00000514055 INSRP06213 1382 aa11.95□□□□□ -0.5
CAST-240ENST00000514055 DDR1Q08345 913 aa11.95□□□□□ -0.5
CAST-240ENST00000514055 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
CAST-240ENST00000514055 KDRP35968 1356 aa11.94□□□□□ -0.5
CAST-240ENST00000514055 POTECB2RU33 542 aa11.94□□□□□ -0.5
CAST-240ENST00000514055 FYB1O15117 783 aa11.94□□□□□ -0.5
CAST-240ENST00000514055 VEGFAP15692 232 aaPredicted RBP11.93□□□□□ -0.5
CAST-240ENST00000514055 RFC4P35249 363 aa11.93□□□□□ -0.5
CAST-240ENST00000514055 FKBP8Q14318 412 aa11.93□□□□□ -0.5
CAST-240ENST00000514055 FAM161AQ3B820 660 aa11.93□□□□□ -0.5
CAST-240ENST00000514055 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
CAST-240ENST00000514055 ANKRD26Q9UPS8 1709 aa11.93□□□□□ -0.5
CAST-240ENST00000514055 WASHC2AQ641Q2 1341 aa11.92□□□□□ -0.5
CAST-240ENST00000514055 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
CAST-240ENST00000514055 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
CAST-240ENST00000514055 EMILIN1Q9Y6C2 1016 aa11.92□□□□□ -0.5
CAST-240ENST00000514055 FLT4P35916 1363 aa11.92□□□□□ -0.5
CAST-240ENST00000514055 PHKG2P15735 406 aa11.91□□□□□ -0.5
CAST-240ENST00000514055 ADRA2BP18089 450 aa11.91□□□□□ -0.5
CAST-240ENST00000514055 CARD14Q9BXL6 1004 aa11.91□□□□□ -0.5
CAST-240ENST00000514055 SPG7Q9UQ90 795 aa11.91□□□□□ -0.5
CAST-240ENST00000514055 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
CAST-240ENST00000514055 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.5
CAST-240ENST00000514055 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
CAST-240ENST00000514055 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
CAST-240ENST00000514055 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
CAST-240ENST00000514055 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
CAST-240ENST00000514055 PANK3Q9H999 370 aa11.9□□□□□ -0.5
CAST-240ENST00000514055 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
CAST-240ENST00000514055 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
CAST-240ENST00000514055 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
CAST-240ENST00000514055 LMNB1P20700 586 aa11.88□□□□□ -0.51
CAST-240ENST00000514055 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
CAST-240ENST00000514055 EYA1Q99502 592 aa11.88□□□□□ -0.51
CAST-240ENST00000514055 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
CAST-240ENST00000514055 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
CAST-240ENST00000514055 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
CAST-240ENST00000514055 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
CAST-240ENST00000514055 NFKBIEO00221 500 aa11.87□□□□□ -0.51
CAST-240ENST00000514055 PPM1GO15355 546 aaPredicted RBP11.87□□□□□ -0.51
CAST-240ENST00000514055 LBX1P52954 281 aa11.87□□□□□ -0.51
CAST-240ENST00000514055 ABHD8Q96I13 439 aa11.87□□□□□ -0.51
CAST-240ENST00000514055 TM4SF1P30408 202 aa11.86□□□□□ -0.51
CAST-240ENST00000514055 CTCFP49711 727 aaPredicted RBP11.86□□□□□ -0.51
CAST-240ENST00000514055 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms