RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 FCHSD2O94868 740 aa16.92■□□□□ 0.3
PTPN20-229ENST00000513756 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
PTPN20-229ENST00000513756 TMF1P82094 1093 aa16.92■□□□□ 0.3
PTPN20-229ENST00000513756 TNS4Q8IZW8 715 aa16.92■□□□□ 0.3
PTPN20-229ENST00000513756 GGNBP2Q9H3C7 697 aa16.92■□□□□ 0.3
PTPN20-229ENST00000513756 N4BP2Q86UW6 1770 aaPredicted RBP16.92■□□□□ 0.3
PTPN20-229ENST00000513756 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
PTPN20-229ENST00000513756 PRELPP51888 382 aa16.91■□□□□ 0.3
PTPN20-229ENST00000513756 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
PTPN20-229ENST00000513756 C9orf131Q5VYM1 1079 aa16.91■□□□□ 0.3
PTPN20-229ENST00000513756 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
PTPN20-229ENST00000513756 ITPK1Q13572 414 aa16.9■□□□□ 0.3
PTPN20-229ENST00000513756 RTCBQ9Y3I0 505 aaKnown RBP16.9■□□□□ 0.3
PTPN20-229ENST00000513756 C10orf71Q711Q0 1435 aa16.89■□□□□ 0.29
PTPN20-229ENST00000513756 PCNTO95613 3336 aa16.89■□□□□ 0.29
PTPN20-229ENST00000513756 DPEP1P16444 411 aa16.89■□□□□ 0.29
PTPN20-229ENST00000513756 HTRA3P83110 453 aa16.89■□□□□ 0.29
PTPN20-229ENST00000513756 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
PTPN20-229ENST00000513756 PKD1L3Q7Z443 1732 aa16.89■□□□□ 0.29
PTPN20-229ENST00000513756 KIAA1551Q9HCM1 1747 aa16.89■□□□□ 0.29
PTPN20-229ENST00000513756 ADRA2BP18089 450 aa16.88■□□□□ 0.29
PTPN20-229ENST00000513756 TESK2Q96S53 571 aa16.88■□□□□ 0.29
PTPN20-229ENST00000513756 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
PTPN20-229ENST00000513756 ST20-MTHFSA0A0A6YYL1 179 aa16.87■□□□□ 0.29
PTPN20-229ENST00000513756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.87■□□□□ 0.29
PTPN20-229ENST00000513756 PIM2Q9P1W9 311 aa16.86■□□□□ 0.29
PTPN20-229ENST00000513756 RFC4P35249 363 aa16.85■□□□□ 0.29
PTPN20-229ENST00000513756 RC3H1Q5TC82 1133 aaKnown RBP16.85■□□□□ 0.29
PTPN20-229ENST00000513756 IFNL2Q8IZJ0 200 aa16.85■□□□□ 0.29
PTPN20-229ENST00000513756 SMC1BQ8NDV3 1235 aa16.85■□□□□ 0.29
PTPN20-229ENST00000513756 ATG3Q9NT62 314 aa16.85■□□□□ 0.29
PTPN20-229ENST00000513756 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
PTPN20-229ENST00000513756 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
PTPN20-229ENST00000513756 RRAGCQ9HB90 399 aa16.84■□□□□ 0.29
PTPN20-229ENST00000513756 RNF181Q9P0P0 153 aa16.84■□□□□ 0.29
PTPN20-229ENST00000513756 KCPQ6ZWJ8 1503 aa16.84■□□□□ 0.29
PTPN20-229ENST00000513756 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
PTPN20-229ENST00000513756 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
PTPN20-229ENST00000513756 GYS1P13807 737 aa16.83■□□□□ 0.28
PTPN20-229ENST00000513756 KCNA3P22001 575 aa16.83■□□□□ 0.28
PTPN20-229ENST00000513756 BRCA1P38398 1863 aaKnown RBP16.83■□□□□ 0.28
PTPN20-229ENST00000513756 NCAPD2Q15021 1401 aa16.83■□□□□ 0.28
PTPN20-229ENST00000513756 DCAF5Q96JK2 942 aa16.83■□□□□ 0.28
PTPN20-229ENST00000513756 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
PTPN20-229ENST00000513756 PHKG2P15735 406 aa16.82■□□□□ 0.28
PTPN20-229ENST00000513756 CNTNAP4Q9C0A0 1308 aa16.81■□□□□ 0.28
PTPN20-229ENST00000513756 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
PTPN20-229ENST00000513756 RPS6KA4O75676 772 aa16.81■□□□□ 0.28
PTPN20-229ENST00000513756 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
PTPN20-229ENST00000513756 EMILIN1Q9Y6C2 1016 aa16.81■□□□□ 0.28
PTPN20-229ENST00000513756 KIF20BQ96Q89 1820 aa16.81■□□□□ 0.28
PTPN20-229ENST00000513756 TNRC6CQ9HCJ0 1690 aaKnown RBP16.81■□□□□ 0.28
PTPN20-229ENST00000513756 KDRP35968 1356 aa16.79■□□□□ 0.28
PTPN20-229ENST00000513756 ZNF831Q5JPB2 1677 aa16.79■□□□□ 0.28
PTPN20-229ENST00000513756 ZC3H4Q9UPT8 1303 aaKnown RBP16.79■□□□□ 0.28
PTPN20-229ENST00000513756 ERVV-2B6SEH9 535 aa16.79■□□□□ 0.28
PTPN20-229ENST00000513756 EYA1Q99502 592 aa16.79■□□□□ 0.28
PTPN20-229ENST00000513756 WASHC2AQ641Q2 1341 aa16.78■□□□□ 0.28
PTPN20-229ENST00000513756 HSPA1AP0DMV8 641 aaKnown RBP16.78■□□□□ 0.28
PTPN20-229ENST00000513756 HSPA1BP0DMV9 641 aaKnown RBP16.78■□□□□ 0.28
PTPN20-229ENST00000513756 CDCA8Q53HL2 280 aa16.78■□□□□ 0.28
PTPN20-229ENST00000513756 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
PTPN20-229ENST00000513756 SLC4A9Q96Q91 983 aa16.77■□□□□ 0.28
PTPN20-229ENST00000513756 VEGFAP15692 232 aaPredicted RBP16.75■□□□□ 0.27
PTPN20-229ENST00000513756 SBF1O95248 1867 aa16.75■□□□□ 0.27
PTPN20-229ENST00000513756 COL5A3P25940 1745 aaPredicted RBP16.74■□□□□ 0.27
PTPN20-229ENST00000513756 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
PTPN20-229ENST00000513756 CHRNA5P30532 468 aa16.73■□□□□ 0.27
PTPN20-229ENST00000513756 FKBP8Q14318 412 aa16.73■□□□□ 0.27
PTPN20-229ENST00000513756 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
PTPN20-229ENST00000513756 LMNB1P20700 586 aa16.72■□□□□ 0.27
PTPN20-229ENST00000513756 CABP4P57796 275 aa16.72■□□□□ 0.27
PTPN20-229ENST00000513756 ANKRD26Q9UPS8 1709 aa16.72■□□□□ 0.27
PTPN20-229ENST00000513756 CRKLP46109 303 aaKnown RBP16.71■□□□□ 0.27
PTPN20-229ENST00000513756 DDR1Q08345 913 aa16.71■□□□□ 0.27
PTPN20-229ENST00000513756 CARD14Q9BXL6 1004 aa16.71■□□□□ 0.27
PTPN20-229ENST00000513756 SRP68Q9UHB9 627 aaKnown RBP16.71■□□□□ 0.27
PTPN20-229ENST00000513756 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
PTPN20-229ENST00000513756 PLEKHO1Q53GL0 409 aaPredicted RBP16.7■□□□□ 0.26
PTPN20-229ENST00000513756 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
PTPN20-229ENST00000513756 POLRMTO00411 1230 aaKnown RBP16.69■□□□□ 0.26
PTPN20-229ENST00000513756 PTCD1O75127 700 aaKnown RBP16.69■□□□□ 0.26
PTPN20-229ENST00000513756 ZPR1O75312 459 aa16.69■□□□□ 0.26
PTPN20-229ENST00000513756 TM4SF1P30408 202 aa16.69■□□□□ 0.26
PTPN20-229ENST00000513756 RASSF7Q02833 373 aa16.69■□□□□ 0.26
PTPN20-229ENST00000513756 POLKQ9UBT6 870 aa16.69■□□□□ 0.26
PTPN20-229ENST00000513756 EIF4A2Q14240 407 aaKnown RBP16.68■□□□□ 0.26
PTPN20-229ENST00000513756 AMOTQ4VCS5 1084 aa16.68■□□□□ 0.26
PTPN20-229ENST00000513756 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
PTPN20-229ENST00000513756 MTHFSP49914 203 aa16.66■□□□□ 0.26
PTPN20-229ENST00000513756 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
PTPN20-229ENST00000513756 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
PTPN20-229ENST00000513756 C1orf141Q5JVX7 400 aa16.65■□□□□ 0.26
PTPN20-229ENST00000513756 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
PTPN20-229ENST00000513756 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
PTPN20-229ENST00000513756 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
PTPN20-229ENST00000513756 INTS5Q6P9B9 1019 aaKnown RBP16.63■□□□□ 0.25
PTPN20-229ENST00000513756 POTECB2RU33 542 aa16.61■□□□□ 0.25
PTPN20-229ENST00000513756 H0YIN7 160 aa16.61■□□□□ 0.25
PTPN20-229ENST00000513756 C2CD5Q86YS7 1000 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms