RNA–Protein interactions for RNA: ENST00000513719.1

SNCAIP-218, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,303 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-218ENST00000513719 RAPGEF4Q8WZA2 1011 aa16.57■□□□□ 0.24
SNCAIP-218ENST00000513719 MEIS3Q99687 375 aa16.57■□□□□ 0.24
SNCAIP-218ENST00000513719 NUCB1Q02818 461 aa16.57■□□□□ 0.24
SNCAIP-218ENST00000513719 ANP32AP39687 249 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-218ENST00000513719 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
SNCAIP-218ENST00000513719 ABCC6O95255 1503 aa16.56■□□□□ 0.24
SNCAIP-218ENST00000513719 SEC24BO95487 1268 aa16.56■□□□□ 0.24
SNCAIP-218ENST00000513719 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
SNCAIP-218ENST00000513719 PHAXQ9H814 394 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-218ENST00000513719 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
SNCAIP-218ENST00000513719 OVOS2A0A0G2JMS6 1433 aa16.55■□□□□ 0.24
SNCAIP-218ENST00000513719 VIRMAQ69YN4 1812 aaKnown RBP16.55■□□□□ 0.24
SNCAIP-218ENST00000513719 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
SNCAIP-218ENST00000513719 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
SNCAIP-218ENST00000513719 KDM6AO15550 1401 aaPredicted RBP16.55■□□□□ 0.24
SNCAIP-218ENST00000513719 ATP10DQ9P241 1426 aa16.55■□□□□ 0.24
SNCAIP-218ENST00000513719 PHKG2P15735 406 aa16.54■□□□□ 0.24
SNCAIP-218ENST00000513719 EIF2S2P20042 333 aaKnown RBP16.54■□□□□ 0.24
SNCAIP-218ENST00000513719 PRKCSHP14314 528 aaPredicted RBP16.54■□□□□ 0.24
SNCAIP-218ENST00000513719 PRDM11Q9NQV5 511 aa16.54■□□□□ 0.24
SNCAIP-218ENST00000513719 HEG1Q9ULI3 1381 aa16.54■□□□□ 0.24
SNCAIP-218ENST00000513719 PRAMEF22A3QJZ6 481 aa16.53■□□□□ 0.24
SNCAIP-218ENST00000513719 CYP27B1O15528 508 aa16.53■□□□□ 0.24
SNCAIP-218ENST00000513719 FKBP5Q13451 457 aaPredicted RBP16.53■□□□□ 0.24
SNCAIP-218ENST00000513719 LNPKQ9C0E8 428 aa16.53■□□□□ 0.24
SNCAIP-218ENST00000513719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNCAIP-218ENST00000513719 CHD1LQ86WJ1 897 aa16.53■□□□□ 0.24
SNCAIP-218ENST00000513719 SIPA1L3O60292 1781 aaPredicted RBP16.52■□□□□ 0.24
SNCAIP-218ENST00000513719 HOXB7P09629 217 aa16.52■□□□□ 0.24
SNCAIP-218ENST00000513719 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
SNCAIP-218ENST00000513719 ANKRD44Q8N8A2 993 aa16.52■□□□□ 0.24
SNCAIP-218ENST00000513719 GCC1Q96CN9 775 aa16.52■□□□□ 0.24
SNCAIP-218ENST00000513719 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.24
SNCAIP-218ENST00000513719 CCT4P50991 539 aaKnown RBP16.52■□□□□ 0.23
SNCAIP-218ENST00000513719 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.23
SNCAIP-218ENST00000513719 SPG7Q9UQ90 795 aa16.52■□□□□ 0.23
SNCAIP-218ENST00000513719 GIGYF1O75420 1035 aaPredicted RBP16.51■□□□□ 0.23
SNCAIP-218ENST00000513719 ANXA1P04083 346 aa16.51■□□□□ 0.23
SNCAIP-218ENST00000513719 ANKRD45Q5TZF3 282 aa16.51■□□□□ 0.23
SNCAIP-218ENST00000513719 WDR17Q8IZU2 1322 aa16.51■□□□□ 0.23
SNCAIP-218ENST00000513719 ABCA3Q99758 1704 aa16.51■□□□□ 0.23
SNCAIP-218ENST00000513719 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
SNCAIP-218ENST00000513719 DCTPP1Q9H773 170 aa16.5■□□□□ 0.23
SNCAIP-218ENST00000513719 SLC52A2Q9HAB3 445 aa16.5■□□□□ 0.23
SNCAIP-218ENST00000513719 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
SNCAIP-218ENST00000513719 IFNL2Q8IZJ0 200 aa16.5■□□□□ 0.23
SNCAIP-218ENST00000513719 NFATC2IPQ8NCF5 419 aa16.5■□□□□ 0.23
SNCAIP-218ENST00000513719 RPAP2Q8IXW5 612 aaPredicted RBP16.49■□□□□ 0.23
SNCAIP-218ENST00000513719 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
SNCAIP-218ENST00000513719 SCN11AQ9UI33 1791 aa16.48■□□□□ 0.23
SNCAIP-218ENST00000513719 PROSER3Q2NL68 480 aa16.48■□□□□ 0.23
SNCAIP-218ENST00000513719 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
SNCAIP-218ENST00000513719 TOM1L2Q6ZVM7 507 aa16.47■□□□□ 0.23
SNCAIP-218ENST00000513719 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
SNCAIP-218ENST00000513719 LARP1Q6PKG0 1096 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-218ENST00000513719 USP44Q9H0E7 712 aa16.46■□□□□ 0.23
SNCAIP-218ENST00000513719 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-218ENST00000513719 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.23
SNCAIP-218ENST00000513719 DCAF5Q96JK2 942 aa16.46■□□□□ 0.23
SNCAIP-218ENST00000513719 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
SNCAIP-218ENST00000513719 PI4KAP2A4QPH2 592 aa16.45■□□□□ 0.22
SNCAIP-218ENST00000513719 PI4KAP1Q8N8J0 262 aa16.45■□□□□ 0.22
SNCAIP-218ENST00000513719 PDIA6Q15084 440 aa16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 CARD10Q9BWT7 1032 aa16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 DBF4Q9UBU7 674 aaPredicted RBP16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 ADCY9O60503 1353 aa16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 PXDNLA1KZ92 1463 aa16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 LTBP4Q8N2S1 1624 aa16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 GNAI2P04899 355 aa16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 ZNF496Q96IT1 587 aaPredicted RBP16.44■□□□□ 0.22
SNCAIP-218ENST00000513719 MRC1P22897 1456 aa16.43■□□□□ 0.22
SNCAIP-218ENST00000513719 BEND3Q5T5X7 828 aa16.43■□□□□ 0.22
SNCAIP-218ENST00000513719 ZBTB47Q9UFB7 747 aaPredicted RBP16.43■□□□□ 0.22
SNCAIP-218ENST00000513719 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
SNCAIP-218ENST00000513719 N4BP2Q86UW6 1770 aaPredicted RBP16.42■□□□□ 0.22
SNCAIP-218ENST00000513719 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
SNCAIP-218ENST00000513719 DNAAF4Q8WXU2 420 aa16.42■□□□□ 0.22
SNCAIP-218ENST00000513719 ROBO1Q9Y6N7 1651 aa16.42■□□□□ 0.22
SNCAIP-218ENST00000513719 GNAI3P08754 354 aa16.41■□□□□ 0.22
SNCAIP-218ENST00000513719 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
SNCAIP-218ENST00000513719 SMARCA5O60264 1052 aaPredicted RBP16.41■□□□□ 0.22
SNCAIP-218ENST00000513719 IL2RBP14784 551 aa16.41■□□□□ 0.22
SNCAIP-218ENST00000513719 PLEKHM2Q8IWE5 1019 aa16.41■□□□□ 0.22
SNCAIP-218ENST00000513719 OTUD7AQ8TE49 926 aaPredicted RBP16.41■□□□□ 0.22
SNCAIP-218ENST00000513719 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
SNCAIP-218ENST00000513719 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
SNCAIP-218ENST00000513719 EVA1CP58658 441 aa16.4■□□□□ 0.22
SNCAIP-218ENST00000513719 SRCIN1Q9C0H9 1055 aa16.4■□□□□ 0.22
SNCAIP-218ENST00000513719 C5P01031 1676 aa16.4■□□□□ 0.22
SNCAIP-218ENST00000513719 CABP4P57796 275 aa16.4■□□□□ 0.22
SNCAIP-218ENST00000513719 ATP8B2P98198 1209 aa16.4■□□□□ 0.22
SNCAIP-218ENST00000513719 ANP32EQ9BTT0 268 aa16.4■□□□□ 0.22
SNCAIP-218ENST00000513719 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
SNCAIP-218ENST00000513719 APBB1O00213 710 aa16.39■□□□□ 0.21
SNCAIP-218ENST00000513719 NBPF7P0C2Y1 421 aaPredicted RBP16.39■□□□□ 0.21
SNCAIP-218ENST00000513719 BMP2KLQ5H9B9 411 aa16.39■□□□□ 0.21
SNCAIP-218ENST00000513719 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNCAIP-218ENST00000513719 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms