RNA–Protein interactions for RNA: ENST00000513436.6

SERF1A-209, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 3 BASIC

Gene SERF1A, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-209ENST00000513436 PER1O15534 1290 aaPredicted RBP16.48■□□□□ 0.23
SERF1A-209ENST00000513436 PHF14O94880 888 aa16.48■□□□□ 0.23
SERF1A-209ENST00000513436 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
SERF1A-209ENST00000513436 MSL1Q68DK7 614 aa16.47■□□□□ 0.23
SERF1A-209ENST00000513436 GPR162Q16538 588 aa16.46■□□□□ 0.23
SERF1A-209ENST00000513436 PELP1Q8IZL8 1130 aaKnown RBP16.46■□□□□ 0.23
SERF1A-209ENST00000513436 ATG3Q9NT62 314 aa16.46■□□□□ 0.23
SERF1A-209ENST00000513436 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
SERF1A-209ENST00000513436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.44■□□□□ 0.22
SERF1A-209ENST00000513436 HMOX1P09601 288 aa16.44■□□□□ 0.22
SERF1A-209ENST00000513436 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
SERF1A-209ENST00000513436 MAP3K5Q99683 1374 aa16.44■□□□□ 0.22
SERF1A-209ENST00000513436 GNPATO15228 680 aa16.43■□□□□ 0.22
SERF1A-209ENST00000513436 SSFA2P28290 1259 aa16.43■□□□□ 0.22
SERF1A-209ENST00000513436 TOGARAM1Q9Y4F4 1720 aa16.43■□□□□ 0.22
SERF1A-209ENST00000513436 ITGB4P16144 1822 aa16.43■□□□□ 0.22
SERF1A-209ENST00000513436 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
SERF1A-209ENST00000513436 QSER1Q2KHR3 1735 aa16.42■□□□□ 0.22
SERF1A-209ENST00000513436 ITPK1Q13572 414 aa16.42■□□□□ 0.22
SERF1A-209ENST00000513436 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
SERF1A-209ENST00000513436 C5P01031 1676 aa16.41■□□□□ 0.22
SERF1A-209ENST00000513436 U2SURPO15042 1029 aaKnown RBP16.41■□□□□ 0.22
SERF1A-209ENST00000513436 SMIM5Q71RC9 77 aa16.41■□□□□ 0.22
SERF1A-209ENST00000513436 PTCD1O75127 700 aaKnown RBP16.4■□□□□ 0.22
SERF1A-209ENST00000513436 RTCBQ9Y3I0 505 aaKnown RBP16.4■□□□□ 0.22
SERF1A-209ENST00000513436 KDRP35968 1356 aa16.4■□□□□ 0.22
SERF1A-209ENST00000513436 TRAPPC3LQ5T215 181 aa16.4■□□□□ 0.22
SERF1A-209ENST00000513436 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
SERF1A-209ENST00000513436 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
SERF1A-209ENST00000513436 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
SERF1A-209ENST00000513436 CFAP53Q96M91 514 aa16.39■□□□□ 0.21
SERF1A-209ENST00000513436 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
SERF1A-209ENST00000513436 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
SERF1A-209ENST00000513436 KDM6AO15550 1401 aaPredicted RBP16.38■□□□□ 0.21
SERF1A-209ENST00000513436 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
SERF1A-209ENST00000513436 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
SERF1A-209ENST00000513436 RFC4P35249 363 aa16.36■□□□□ 0.21
SERF1A-209ENST00000513436 PLCB2Q00722 1185 aa16.36■□□□□ 0.21
SERF1A-209ENST00000513436 MTHFSDQ2M296 383 aaKnown RBP16.36■□□□□ 0.21
SERF1A-209ENST00000513436 SLC4A9Q96Q91 983 aa16.36■□□□□ 0.21
SERF1A-209ENST00000513436 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
SERF1A-209ENST00000513436 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
SERF1A-209ENST00000513436 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
SERF1A-209ENST00000513436 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
SERF1A-209ENST00000513436 GRIN3BO60391 1043 aa16.35■□□□□ 0.21
SERF1A-209ENST00000513436 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
SERF1A-209ENST00000513436 UTRNP46939 3433 aa16.35■□□□□ 0.21
SERF1A-209ENST00000513436 RPS6KA4O75676 772 aa16.34■□□□□ 0.21
SERF1A-209ENST00000513436 NLGN1Q8N2Q7 840 aa16.34■□□□□ 0.21
SERF1A-209ENST00000513436 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
SERF1A-209ENST00000513436 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
SERF1A-209ENST00000513436 GAS2L2Q8NHY3 880 aa16.32■□□□□ 0.2
SERF1A-209ENST00000513436 MMP10P09238 476 aa16.31■□□□□ 0.2
SERF1A-209ENST00000513436 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
SERF1A-209ENST00000513436 TEFQ10587 303 aa16.3■□□□□ 0.2
SERF1A-209ENST00000513436 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
SERF1A-209ENST00000513436 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
SERF1A-209ENST00000513436 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
SERF1A-209ENST00000513436 GNAT3A8MTJ3 354 aa16.3■□□□□ 0.2
SERF1A-209ENST00000513436 ZNF784Q8NCA9 323 aaPredicted RBP16.3■□□□□ 0.2
SERF1A-209ENST00000513436 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
SERF1A-209ENST00000513436 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
SERF1A-209ENST00000513436 U2AF1L5P0DN76 240 aaPredicted RBP16.29■□□□□ 0.2
SERF1A-209ENST00000513436 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
SERF1A-209ENST00000513436 PPP2R1AP30153 589 aa16.29■□□□□ 0.2
SERF1A-209ENST00000513436 U2AF1Q01081 240 aaKnown RBP eCLIP16.29■□□□□ 0.2
SERF1A-209ENST00000513436 DNAJC10Q8IXB1 793 aa16.28■□□□□ 0.2
SERF1A-209ENST00000513436 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
SERF1A-209ENST00000513436 GYS1P13807 737 aa16.27■□□□□ 0.2
SERF1A-209ENST00000513436 PRKAR2BP31323 418 aa16.27■□□□□ 0.2
SERF1A-209ENST00000513436 CCDC87Q9NVE4 849 aa16.27■□□□□ 0.2
SERF1A-209ENST00000513436 ZPR1O75312 459 aa16.27■□□□□ 0.19
SERF1A-209ENST00000513436 MIER1Q8N108 512 aa16.27■□□□□ 0.19
SERF1A-209ENST00000513436 NEFMP07197 916 aa16.25■□□□□ 0.19
SERF1A-209ENST00000513436 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
SERF1A-209ENST00000513436 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
SERF1A-209ENST00000513436 RTF1Q92541 710 aaKnown RBP16.25■□□□□ 0.19
SERF1A-209ENST00000513436 GOLGB1Q14789 3259 aaKnown RBP16.25■□□□□ 0.19
SERF1A-209ENST00000513436 COL3A1P02461 1466 aaPredicted RBP16.25■□□□□ 0.19
SERF1A-209ENST00000513436 STARD3NLO95772 234 aa16.24■□□□□ 0.19
SERF1A-209ENST00000513436 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
SERF1A-209ENST00000513436 SRP68Q9UHB9 627 aaKnown RBP16.24■□□□□ 0.19
SERF1A-209ENST00000513436 ZNF831Q5JPB2 1677 aa16.24■□□□□ 0.19
SERF1A-209ENST00000513436 CYP19A1P11511 503 aaPredicted RBP16.24■□□□□ 0.19
SERF1A-209ENST00000513436 TGFB2P61812 414 aa16.24■□□□□ 0.19
SERF1A-209ENST00000513436 TPRNQ4KMQ1 711 aa16.24■□□□□ 0.19
SERF1A-209ENST00000513436 PHACTR3Q96KR7 559 aa16.24■□□□□ 0.19
SERF1A-209ENST00000513436 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
SERF1A-209ENST00000513436 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
SERF1A-209ENST00000513436 FCHSD2O94868 740 aa16.23■□□□□ 0.19
SERF1A-209ENST00000513436 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
SERF1A-209ENST00000513436 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
SERF1A-209ENST00000513436 CANXP27824 592 aaKnown RBP16.22■□□□□ 0.19
SERF1A-209ENST00000513436 FKBP8Q14318 412 aa16.22■□□□□ 0.19
SERF1A-209ENST00000513436 ZNF790Q6PG37 636 aa16.22■□□□□ 0.19
SERF1A-209ENST00000513436 TEX13AQ9BXU3 409 aaPredicted RBP16.22■□□□□ 0.19
SERF1A-209ENST00000513436 CHD4Q14839 1912 aa16.21■□□□□ 0.19
SERF1A-209ENST00000513436 A0A0G2JLW4 131 aa16.21■□□□□ 0.19
SERF1A-209ENST00000513436 BTBD11A6QL63 1104 aa16.21■□□□□ 0.19
SERF1A-209ENST00000513436 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms