RNA–Protein interactions for RNA: ENST00000513144.1

SERF1B-206, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2

Gene SERF1B, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-206ENST00000513144 SLC27A3Q5K4L6 730 aa9.49□□□□□ -0.89
SERF1B-206ENST00000513144 WASLO00401 505 aaPredicted RBP9.48□□□□□ -0.89
SERF1B-206ENST00000513144 CLDN10P78369 228 aa9.48□□□□□ -0.89
SERF1B-206ENST00000513144 ESCO1Q5FWF5 840 aa9.48□□□□□ -0.89
SERF1B-206ENST00000513144 MKRN1Q9UHC7 482 aaKnown RBP9.48□□□□□ -0.89
SERF1B-206ENST00000513144 SPATA31C2B4DYI2 1134 aa9.47□□□□□ -0.89
SERF1B-206ENST00000513144 KIAA1024Q9UPX6 916 aa9.47□□□□□ -0.89
SERF1B-206ENST00000513144 ITGA6P23229 1130 aa9.46□□□□□ -0.9
SERF1B-206ENST00000513144 CFAP70Q5T0N1 1121 aa9.45□□□□□ -0.9
SERF1B-206ENST00000513144 NBPF10Q6P3W6 841 aaKnown RBP9.45□□□□□ -0.9
SERF1B-206ENST00000513144 NBPF15Q8N660 670 aa9.45□□□□□ -0.9
SERF1B-206ENST00000513144 GPR161Q8N6U8 529 aaKnown RBP9.45□□□□□ -0.9
SERF1B-206ENST00000513144 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
SERF1B-206ENST00000513144 SLC4A9Q96Q91 983 aa9.45□□□□□ -0.9
SERF1B-206ENST00000513144 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
SERF1B-206ENST00000513144 SERTAD1Q9UHV2 236 aa9.45□□□□□ -0.9
SERF1B-206ENST00000513144 DKK1O94907 266 aa9.44□□□□□ -0.9
SERF1B-206ENST00000513144 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
SERF1B-206ENST00000513144 OGFOD1Q8N543 542 aa9.44□□□□□ -0.9
SERF1B-206ENST00000513144 CUEDC1Q9NWM3 386 aaPredicted RBP9.44□□□□□ -0.9
SERF1B-206ENST00000513144 LMOD1P29536 600 aaPredicted RBP9.43□□□□□ -0.9
SERF1B-206ENST00000513144 SMTNP53814 917 aa9.43□□□□□ -0.9
SERF1B-206ENST00000513144 TLR1Q15399 786 aa9.43□□□□□ -0.9
SERF1B-206ENST00000513144 WDR44Q5JSH3 913 aa9.43□□□□□ -0.9
SERF1B-206ENST00000513144 TRIM50Q86XT4 487 aa9.43□□□□□ -0.9
SERF1B-206ENST00000513144 PPARGC1BQ86YN6 1023 aaKnown RBP9.43□□□□□ -0.9
SERF1B-206ENST00000513144 VWA5B2Q8N398 1253 aa9.43□□□□□ -0.9
SERF1B-206ENST00000513144 NANOS1Q8WY41 292 aaKnown RBP9.43□□□□□ -0.9
SERF1B-206ENST00000513144 ZNF358Q9NW07 568 aa9.43□□□□□ -0.9
SERF1B-206ENST00000513144 CDC14CA4D256 554 aa9.42□□□□□ -0.9
SERF1B-206ENST00000513144 ARID3CA6NKF2 412 aa9.42□□□□□ -0.9
SERF1B-206ENST00000513144 C4orf17Q53FE4 359 aa9.42□□□□□ -0.9
SERF1B-206ENST00000513144 TAS1R3Q7RTX0 852 aa9.42□□□□□ -0.9
SERF1B-206ENST00000513144 ZNF295-AS1Q8N0V1 137 aa9.42□□□□□ -0.9
SERF1B-206ENST00000513144 DNAAF2Q9NVR5 837 aaKnown RBP9.42□□□□□ -0.9
SERF1B-206ENST00000513144 USP3Q9Y6I4 520 aa9.42□□□□□ -0.9
SERF1B-206ENST00000513144 PHKA2P46019 1235 aa9.41□□□□□ -0.9
SERF1B-206ENST00000513144 PSME1Q06323 249 aa9.41□□□□□ -0.9
SERF1B-206ENST00000513144 MTFR1Q15390 333 aa9.41□□□□□ -0.9
SERF1B-206ENST00000513144 CCDC102BQ68D86 513 aa9.41□□□□□ -0.9
SERF1B-206ENST00000513144 TMEM214Q6NUQ4 689 aaKnown RBP9.41□□□□□ -0.9
SERF1B-206ENST00000513144 C14orf37Q86TY3 774 aa9.41□□□□□ -0.9
SERF1B-206ENST00000513144 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
SERF1B-206ENST00000513144 IQSEC3Q9UPP2 1182 aaPredicted RBP9.41□□□□□ -0.9
SERF1B-206ENST00000513144 A6NJY4 79 aa9.4□□□□□ -0.9
SERF1B-206ENST00000513144 ATP1A2P50993 1020 aa9.4□□□□□ -0.9
SERF1B-206ENST00000513144 EPHA4P54764 986 aa9.4□□□□□ -0.9
SERF1B-206ENST00000513144 SV2AQ7L0J3 742 aa9.4□□□□□ -0.9
SERF1B-206ENST00000513144 LARGE2Q8N3Y3 721 aa9.4□□□□□ -0.9
SERF1B-206ENST00000513144 ZNF594Q96JF6 807 aaPredicted RBP9.4□□□□□ -0.9
SERF1B-206ENST00000513144 GAS2L1Q99501 681 aaPredicted RBP9.4□□□□□ -0.9
SERF1B-206ENST00000513144 TIMMDC1Q9NPL8 285 aa9.4□□□□□ -0.9
SERF1B-206ENST00000513144 DYRK1BQ9Y463 629 aa9.4□□□□□ -0.9
SERF1B-206ENST00000513144 RASA1P20936 1047 aa9.39□□□□□ -0.91
SERF1B-206ENST00000513144 CRTC2Q53ET0 693 aaPredicted RBP9.39□□□□□ -0.91
SERF1B-206ENST00000513144 SIX5Q8N196 739 aa9.39□□□□□ -0.91
SERF1B-206ENST00000513144 RHBDD1Q8TEB9 315 aa9.39□□□□□ -0.91
SERF1B-206ENST00000513144 CDK2AP1O14519 115 aa9.38□□□□□ -0.91
SERF1B-206ENST00000513144 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
SERF1B-206ENST00000513144 GTF2E1P29083 439 aaPredicted RBP9.38□□□□□ -0.91
SERF1B-206ENST00000513144 KRT76Q01546 638 aa9.38□□□□□ -0.91
SERF1B-206ENST00000513144 RIPOR1Q6ZS17 1223 aa9.38□□□□□ -0.91
SERF1B-206ENST00000513144 TNS4Q8IZW8 715 aa9.38□□□□□ -0.91
SERF1B-206ENST00000513144 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
SERF1B-206ENST00000513144 C1orf115Q9H7X2 142 aa9.38□□□□□ -0.91
SERF1B-206ENST00000513144 FOXK2Q01167 660 aa9.37□□□□□ -0.91
SERF1B-206ENST00000513144 PTK7Q13308 1070 aa9.37□□□□□ -0.91
SERF1B-206ENST00000513144 DBN1Q16643 649 aa9.37□□□□□ -0.91
SERF1B-206ENST00000513144 GNASQ5JWF2 1037 aa9.37□□□□□ -0.91
SERF1B-206ENST00000513144 VRTNQ9H8Y1 702 aa9.37□□□□□ -0.91
SERF1B-206ENST00000513144 SCHIP1Q9P0W5 487 aaPredicted RBP9.37□□□□□ -0.91
SERF1B-206ENST00000513144 SFI1A8K8P3 1242 aa9.36□□□□□ -0.91
SERF1B-206ENST00000513144 BACH1O14867 736 aa9.36□□□□□ -0.91
SERF1B-206ENST00000513144 THBS1P07996 1170 aa9.36□□□□□ -0.91
SERF1B-206ENST00000513144 RFX1P22670 979 aa9.36□□□□□ -0.91
SERF1B-206ENST00000513144 SRPK2P78362 688 aaKnown RBP9.36□□□□□ -0.91
SERF1B-206ENST00000513144 CDCA8Q53HL2 280 aa9.36□□□□□ -0.91
SERF1B-206ENST00000513144 ZNF837Q96EG3 531 aaPredicted RBP9.36□□□□□ -0.91
SERF1B-206ENST00000513144 CNTNAP3BQ96NU0 1288 aa9.36□□□□□ -0.91
SERF1B-206ENST00000513144 CNTNAP3Q9BZ76 1288 aa9.36□□□□□ -0.91
SERF1B-206ENST00000513144 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
SERF1B-206ENST00000513144 TRIM22Q8IYM9 498 aa9.35□□□□□ -0.91
SERF1B-206ENST00000513144 ZSCAN1Q8NBB4 408 aa9.35□□□□□ -0.91
SERF1B-206ENST00000513144 FAM196BA6NMK8 535 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L15C9J2P7 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L10C9JJH3 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L13C9JLJ4 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L12C9JPN9 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L11C9JVI0 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L21D6R901 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L18D6R9N7 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L22D6RA61 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L17D6RBQ6 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L19D6RCP7 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L20D6RJB6 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 M0R2N6 131 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 F11P03951 625 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 PLA2G4AP47712 749 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 USP17L24Q0WX57 530 aa9.34□□□□□ -0.91
SERF1B-206ENST00000513144 TBCELQ5QJ74 424 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms