RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
PDPN-210ENST00000513143 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
PDPN-210ENST00000513143 SLFN5Q08AF3 891 aa16.36■□□□□ 0.21
PDPN-210ENST00000513143 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
PDPN-210ENST00000513143 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
PDPN-210ENST00000513143 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
PDPN-210ENST00000513143 ITGB4P16144 1822 aa16.36■□□□□ 0.21
PDPN-210ENST00000513143 E9PSI1 815 aa16.35■□□□□ 0.21
PDPN-210ENST00000513143 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
PDPN-210ENST00000513143 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
PDPN-210ENST00000513143 DOT1LQ8TEK3 1739 aa16.34■□□□□ 0.21
PDPN-210ENST00000513143 BCL9O00512 1426 aa16.34■□□□□ 0.21
PDPN-210ENST00000513143 RGS12O14924 1447 aa16.34■□□□□ 0.21
PDPN-210ENST00000513143 GNAI1P63096 354 aa16.34■□□□□ 0.21
PDPN-210ENST00000513143 TEFQ10587 303 aa16.34■□□□□ 0.21
PDPN-210ENST00000513143 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
PDPN-210ENST00000513143 TRMT2AQ8IZ69 625 aaKnown RBP16.34■□□□□ 0.21
PDPN-210ENST00000513143 CHL1O00533 1208 aa16.33■□□□□ 0.2
PDPN-210ENST00000513143 CABP4P57796 275 aa16.33■□□□□ 0.2
PDPN-210ENST00000513143 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
PDPN-210ENST00000513143 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
PDPN-210ENST00000513143 NFATC2IPQ8NCF5 419 aa16.32■□□□□ 0.2
PDPN-210ENST00000513143 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
PDPN-210ENST00000513143 LAS1LQ9Y4W2 734 aaKnown RBP16.32■□□□□ 0.2
PDPN-210ENST00000513143 KDM3BQ7LBC6 1761 aa16.32■□□□□ 0.2
PDPN-210ENST00000513143 SBF2Q86WG5 1849 aa16.32■□□□□ 0.2
PDPN-210ENST00000513143 DUSP27Q5VZP5 1158 aa16.31■□□□□ 0.2
PDPN-210ENST00000513143 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
PDPN-210ENST00000513143 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
PDPN-210ENST00000513143 BTBD11A6QL63 1104 aa16.29■□□□□ 0.2
PDPN-210ENST00000513143 KCNA4P22459 653 aa16.29■□□□□ 0.2
PDPN-210ENST00000513143 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
PDPN-210ENST00000513143 FAM182BQ5T319 152 aa16.29■□□□□ 0.2
PDPN-210ENST00000513143 TSR2Q969E8 191 aaKnown RBP16.29■□□□□ 0.2
PDPN-210ENST00000513143 TMOD3Q9NYL9 352 aa16.29■□□□□ 0.2
PDPN-210ENST00000513143 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
PDPN-210ENST00000513143 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
PDPN-210ENST00000513143 NHSQ6T4R5 1651 aa16.28■□□□□ 0.2
PDPN-210ENST00000513143 PIGBQ92521 554 aa16.28■□□□□ 0.2
PDPN-210ENST00000513143 ACSBG1Q96GR2 724 aa16.28■□□□□ 0.2
PDPN-210ENST00000513143 PAPPAQ13219 1627 aa16.28■□□□□ 0.2
PDPN-210ENST00000513143 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.2
PDPN-210ENST00000513143 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
PDPN-210ENST00000513143 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
PDPN-210ENST00000513143 KCNQ2O43526 872 aa16.25■□□□□ 0.19
PDPN-210ENST00000513143 ZNF790Q6PG37 636 aa16.25■□□□□ 0.19
PDPN-210ENST00000513143 KCNQ3O43525 872 aa16.24■□□□□ 0.19
PDPN-210ENST00000513143 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
PDPN-210ENST00000513143 BTAF1O14981 1849 aa16.24■□□□□ 0.19
PDPN-210ENST00000513143 EIF4A1P60842 406 aaKnown RBP16.23■□□□□ 0.19
PDPN-210ENST00000513143 EXOSC9Q06265 439 aaKnown RBP16.23■□□□□ 0.19
PDPN-210ENST00000513143 ATG3Q9NT62 314 aa16.23■□□□□ 0.19
PDPN-210ENST00000513143 EP400Q96L91 3159 aa16.23■□□□□ 0.19
PDPN-210ENST00000513143 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
PDPN-210ENST00000513143 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
PDPN-210ENST00000513143 HEG1Q9ULI3 1381 aa16.22■□□□□ 0.19
PDPN-210ENST00000513143 PTF1AQ7RTS3 328 aa16.21■□□□□ 0.19
PDPN-210ENST00000513143 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.19
PDPN-210ENST00000513143 BCL11BQ9C0K0 894 aaPredicted RBP16.21■□□□□ 0.19
PDPN-210ENST00000513143 KCPQ6ZWJ8 1503 aa16.21■□□□□ 0.19
PDPN-210ENST00000513143 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
PDPN-210ENST00000513143 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
PDPN-210ENST00000513143 KRT24Q2M2I5 525 aa16.2■□□□□ 0.18
PDPN-210ENST00000513143 TSPYL6Q8N831 410 aa16.2■□□□□ 0.18
PDPN-210ENST00000513143 ZNF496Q96IT1 587 aaPredicted RBP16.2■□□□□ 0.18
PDPN-210ENST00000513143 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
PDPN-210ENST00000513143 SMARCC1Q92922 1105 aaPredicted RBP16.19■□□□□ 0.18
PDPN-210ENST00000513143 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
PDPN-210ENST00000513143 VAMP4O75379 141 aa16.19■□□□□ 0.18
PDPN-210ENST00000513143 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
PDPN-210ENST00000513143 TRIM37O94972 964 aa16.19■□□□□ 0.18
PDPN-210ENST00000513143 TWISTNBQ3B726 338 aaPredicted RBP16.19■□□□□ 0.18
PDPN-210ENST00000513143 ELL2O00472 640 aaPredicted RBP16.18■□□□□ 0.18
PDPN-210ENST00000513143 CAPN15O75808 1086 aa16.18■□□□□ 0.18
PDPN-210ENST00000513143 HOXB7P09629 217 aa16.18■□□□□ 0.18
PDPN-210ENST00000513143 C5P01031 1676 aa16.17■□□□□ 0.18
PDPN-210ENST00000513143 PALLDQ8WX93 1383 aa16.17■□□□□ 0.18
PDPN-210ENST00000513143 LY75O60449 1722 aa16.17■□□□□ 0.18
PDPN-210ENST00000513143 PTCD1O75127 700 aaKnown RBP16.17■□□□□ 0.18
PDPN-210ENST00000513143 SNRPA1P09661 255 aaKnown RBP16.17■□□□□ 0.18
PDPN-210ENST00000513143 VSIG10Q8N0Z9 540 aa16.17■□□□□ 0.18
PDPN-210ENST00000513143 ZNF831Q5JPB2 1677 aa16.17■□□□□ 0.18
PDPN-210ENST00000513143 ZNF428Q96B54 188 aa16.16■□□□□ 0.18
PDPN-210ENST00000513143 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
PDPN-210ENST00000513143 TNS1Q9HBL0 1735 aaKnown RBP16.15■□□□□ 0.18
PDPN-210ENST00000513143 CACNA1FO60840 1977 aa16.15■□□□□ 0.18
PDPN-210ENST00000513143 CICQ96RK0 1608 aaPredicted RBP16.15■□□□□ 0.18
PDPN-210ENST00000513143 SLC4A9Q96Q91 983 aa16.15■□□□□ 0.18
PDPN-210ENST00000513143 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
PDPN-210ENST00000513143 TJP1Q07157 1748 aa16.14■□□□□ 0.17
PDPN-210ENST00000513143 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.17
PDPN-210ENST00000513143 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
PDPN-210ENST00000513143 SIK1P57059 783 aa16.14■□□□□ 0.17
PDPN-210ENST00000513143 CHMP4AQ9BY43 222 aa16.14■□□□□ 0.17
PDPN-210ENST00000513143 RCAN3Q9UKA8 241 aa16.14■□□□□ 0.17
PDPN-210ENST00000513143 RARSP54136 660 aaKnown RBP16.13■□□□□ 0.17
PDPN-210ENST00000513143 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
PDPN-210ENST00000513143 DSG3P32926 999 aa16.12■□□□□ 0.17
PDPN-210ENST00000513143 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
PDPN-210ENST00000513143 CCDC30Q5VVM6 783 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms