RNA–Protein interactions for RNA: ENST00000512553.5

ITGA3-213, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-213ENST00000512553 ATP6V1AP38606 617 aa12.7□□□□□ -0.38
ITGA3-213ENST00000512553 MTHFSP49914 203 aa12.7□□□□□ -0.38
ITGA3-213ENST00000512553 CABP4P57796 275 aa12.7□□□□□ -0.38
ITGA3-213ENST00000512553 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
ITGA3-213ENST00000512553 KDM6AO15550 1401 aaPredicted RBP12.7□□□□□ -0.38
ITGA3-213ENST00000512553 DIAPH1O60610 1272 aaKnown RBP12.69□□□□□ -0.38
ITGA3-213ENST00000512553 MRC1P22897 1456 aa12.68□□□□□ -0.38
ITGA3-213ENST00000512553 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
ITGA3-213ENST00000512553 CC2D1BQ5T0F9 858 aaKnown RBP12.68□□□□□ -0.38
ITGA3-213ENST00000512553 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
ITGA3-213ENST00000512553 KLHL34Q8N239 644 aa12.68□□□□□ -0.38
ITGA3-213ENST00000512553 ATG3Q9NT62 314 aa12.68□□□□□ -0.38
ITGA3-213ENST00000512553 ASAP1Q9ULH1 1129 aa12.68□□□□□ -0.38
ITGA3-213ENST00000512553 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
ITGA3-213ENST00000512553 GNPATO15228 680 aa12.67□□□□□ -0.38
ITGA3-213ENST00000512553 ADRA2BP18089 450 aa12.67□□□□□ -0.38
ITGA3-213ENST00000512553 CFAP53Q96M91 514 aa12.67□□□□□ -0.38
ITGA3-213ENST00000512553 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
ITGA3-213ENST00000512553 CNTNAP4Q9C0A0 1308 aa12.66□□□□□ -0.38
ITGA3-213ENST00000512553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.66□□□□□ -0.38
ITGA3-213ENST00000512553 PHF14O94880 888 aa12.66□□□□□ -0.38
ITGA3-213ENST00000512553 GPR162Q16538 588 aa12.66□□□□□ -0.38
ITGA3-213ENST00000512553 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
ITGA3-213ENST00000512553 LINC00116Q8NCU8 138 aa12.66□□□□□ -0.38
ITGA3-213ENST00000512553 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
ITGA3-213ENST00000512553 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
ITGA3-213ENST00000512553 C4AP0C0L4 1744 aa12.65□□□□□ -0.38
ITGA3-213ENST00000512553 TJP1Q07157 1748 aa12.65□□□□□ -0.38
ITGA3-213ENST00000512553 RTCBQ9Y3I0 505 aaKnown RBP12.65□□□□□ -0.38
ITGA3-213ENST00000512553 MYH14Q7Z406 1995 aaKnown RBP12.64□□□□□ -0.39
ITGA3-213ENST00000512553 GRIN3BO60391 1043 aa12.64□□□□□ -0.39
ITGA3-213ENST00000512553 ITPK1Q13572 414 aa12.64□□□□□ -0.39
ITGA3-213ENST00000512553 MSL1Q68DK7 614 aa12.64□□□□□ -0.39
ITGA3-213ENST00000512553 KIF13BQ9NQT8 1826 aa12.64□□□□□ -0.39
ITGA3-213ENST00000512553 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
ITGA3-213ENST00000512553 HMOX1P09601 288 aa12.63□□□□□ -0.39
ITGA3-213ENST00000512553 GAS2L2Q8NHY3 880 aa12.63□□□□□ -0.39
ITGA3-213ENST00000512553 SLC52A2Q9HAB3 445 aa12.63□□□□□ -0.39
ITGA3-213ENST00000512553 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
ITGA3-213ENST00000512553 UTRNP46939 3433 aa12.62□□□□□ -0.39
ITGA3-213ENST00000512553 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
ITGA3-213ENST00000512553 NFATC2IPQ8NCF5 419 aa12.62□□□□□ -0.39
ITGA3-213ENST00000512553 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
ITGA3-213ENST00000512553 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
ITGA3-213ENST00000512553 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
ITGA3-213ENST00000512553 NLGN1Q8N2Q7 840 aa12.61□□□□□ -0.39
ITGA3-213ENST00000512553 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
ITGA3-213ENST00000512553 PTCD1O75127 700 aaKnown RBP12.6□□□□□ -0.39
ITGA3-213ENST00000512553 RPS6KA4O75676 772 aa12.6□□□□□ -0.39
ITGA3-213ENST00000512553 RFC4P35249 363 aa12.6□□□□□ -0.39
ITGA3-213ENST00000512553 NLGN2Q8NFZ4 835 aa12.6□□□□□ -0.39
ITGA3-213ENST00000512553 KCPQ6ZWJ8 1503 aa12.58□□□□□ -0.4
ITGA3-213ENST00000512553 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
ITGA3-213ENST00000512553 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
ITGA3-213ENST00000512553 TEFQ10587 303 aa12.58□□□□□ -0.4
ITGA3-213ENST00000512553 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
ITGA3-213ENST00000512553 AMIGO3Q86WK7 504 aa12.58□□□□□ -0.4
ITGA3-213ENST00000512553 TTC5Q8N0Z6 440 aa12.58□□□□□ -0.4
ITGA3-213ENST00000512553 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
ITGA3-213ENST00000512553 SLC4A9Q96Q91 983 aa12.58□□□□□ -0.4
ITGA3-213ENST00000512553 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
ITGA3-213ENST00000512553 MMP10P09238 476 aa12.57□□□□□ -0.4
ITGA3-213ENST00000512553 CNGB1Q14028 1251 aaPredicted RBP12.57□□□□□ -0.4
ITGA3-213ENST00000512553 CCDC87Q9NVE4 849 aa12.57□□□□□ -0.4
ITGA3-213ENST00000512553 C10orf71Q711Q0 1435 aa12.56□□□□□ -0.4
ITGA3-213ENST00000512553 NEFMP07197 916 aa12.56□□□□□ -0.4
ITGA3-213ENST00000512553 ARHGEF1Q92888 912 aaKnown RBP12.56□□□□□ -0.4
ITGA3-213ENST00000512553 PARP3Q9Y6F1 533 aa12.56□□□□□ -0.4
ITGA3-213ENST00000512553 BRCA1P38398 1863 aaKnown RBP12.55□□□□□ -0.4
ITGA3-213ENST00000512553 KIAA1551Q9HCM1 1747 aa12.55□□□□□ -0.4
ITGA3-213ENST00000512553 PPP2R1AP30153 589 aa12.55□□□□□ -0.4
ITGA3-213ENST00000512553 ZNF784Q8NCA9 323 aaPredicted RBP12.55□□□□□ -0.4
ITGA3-213ENST00000512553 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
ITGA3-213ENST00000512553 LGR6Q9HBX8 967 aa12.55□□□□□ -0.4
ITGA3-213ENST00000512553 USP42Q9H9J4 1324 aaKnown RBP12.55□□□□□ -0.4
ITGA3-213ENST00000512553 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
ITGA3-213ENST00000512553 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
ITGA3-213ENST00000512553 ZPR1O75312 459 aa12.54□□□□□ -0.4
ITGA3-213ENST00000512553 FCHSD2O94868 740 aa12.54□□□□□ -0.4
ITGA3-213ENST00000512553 STARD3NLO95772 234 aa12.54□□□□□ -0.4
ITGA3-213ENST00000512553 GYS1P13807 737 aa12.54□□□□□ -0.4
ITGA3-213ENST00000512553 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
ITGA3-213ENST00000512553 TGFB2P61812 414 aa12.54□□□□□ -0.4
ITGA3-213ENST00000512553 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
ITGA3-213ENST00000512553 U2AF1L5P0DN76 240 aaPredicted RBP12.53□□□□□ -0.4
ITGA3-213ENST00000512553 YBX3P16989 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
ITGA3-213ENST00000512553 U2AF1Q01081 240 aaKnown RBP eCLIP12.53□□□□□ -0.4
ITGA3-213ENST00000512553 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
ITGA3-213ENST00000512553 RSPH6AQ9H0K4 717 aa12.53□□□□□ -0.4
ITGA3-213ENST00000512553 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
ITGA3-213ENST00000512553 COL15A1P39059 1388 aa12.53□□□□□ -0.4
ITGA3-213ENST00000512553 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
ITGA3-213ENST00000512553 SCN7AQ01118 1682 aa12.52□□□□□ -0.4
ITGA3-213ENST00000512553 A0A087WZG4 1122 aa12.52□□□□□ -0.41
ITGA3-213ENST00000512553 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
ITGA3-213ENST00000512553 SMIM5Q71RC9 77 aa12.52□□□□□ -0.41
ITGA3-213ENST00000512553 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.41
ITGA3-213ENST00000512553 PNNQ9H307 717 aaKnown RBP12.52□□□□□ -0.41
ITGA3-213ENST00000512553 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.41
ITGA3-213ENST00000512553 HTATSF1O43719 755 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms