RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ASAP1Q9ULH1 1129 aa17.56■□□□□ 0.4
DDX41-215ENST00000512431 FSTL1Q12841 308 aa17.55■□□□□ 0.4
DDX41-215ENST00000512431 ITPK1Q13572 414 aa17.55■□□□□ 0.4
DDX41-215ENST00000512431 KLRG1Q96E93 195 aa17.55■□□□□ 0.4
DDX41-215ENST00000512431 ITGB4P16144 1822 aa17.55■□□□□ 0.4
DDX41-215ENST00000512431 PARP3Q9Y6F1 533 aa17.54■□□□□ 0.4
DDX41-215ENST00000512431 KDM2BQ8NHM5 1336 aa17.53■□□□□ 0.4
DDX41-215ENST00000512431 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
DDX41-215ENST00000512431 DPEP1P16444 411 aa17.53■□□□□ 0.4
DDX41-215ENST00000512431 COL13A1Q5TAT6 717 aaPredicted RBP17.53■□□□□ 0.4
DDX41-215ENST00000512431 C9orf131Q5VYM1 1079 aa17.53■□□□□ 0.4
DDX41-215ENST00000512431 IFNL2Q8IZJ0 200 aa17.53■□□□□ 0.4
DDX41-215ENST00000512431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX41-215ENST00000512431 PLEKHG2Q9H7P9 1386 aa17.53■□□□□ 0.4
DDX41-215ENST00000512431 CAPN15O75808 1086 aa17.52■□□□□ 0.4
DDX41-215ENST00000512431 RFC4P35249 363 aa17.52■□□□□ 0.4
DDX41-215ENST00000512431 JMYQ8N9B5 988 aa17.52■□□□□ 0.4
DDX41-215ENST00000512431 ATG3Q9NT62 314 aa17.52■□□□□ 0.4
DDX41-215ENST00000512431 ADRA2BP18089 450 aa17.51■□□□□ 0.39
DDX41-215ENST00000512431 TNS4Q8IZW8 715 aa17.51■□□□□ 0.39
DDX41-215ENST00000512431 WDR90Q96KV7 1748 aa17.5■□□□□ 0.39
DDX41-215ENST00000512431 C10orf71Q711Q0 1435 aa17.5■□□□□ 0.39
DDX41-215ENST00000512431 HTRA3P83110 453 aa17.5■□□□□ 0.39
DDX41-215ENST00000512431 ARHGEF1Q92888 912 aaKnown RBP17.5■□□□□ 0.39
DDX41-215ENST00000512431 RBM42Q9BTD8 480 aaKnown RBP17.5■□□□□ 0.39
DDX41-215ENST00000512431 PIM2Q9P1W9 311 aa17.5■□□□□ 0.39
DDX41-215ENST00000512431 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
DDX41-215ENST00000512431 PKD1L3Q7Z443 1732 aa17.5■□□□□ 0.39
DDX41-215ENST00000512431 MAP2P11137 1827 aaKnown RBP17.49■□□□□ 0.39
DDX41-215ENST00000512431 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
DDX41-215ENST00000512431 PHKG2P15735 406 aa17.49■□□□□ 0.39
DDX41-215ENST00000512431 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
DDX41-215ENST00000512431 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
DDX41-215ENST00000512431 GYS1P13807 737 aa17.48■□□□□ 0.39
DDX41-215ENST00000512431 RC3H1Q5TC82 1133 aaKnown RBP17.48■□□□□ 0.39
DDX41-215ENST00000512431 DALRD3Q5D0E6 543 aaKnown RBP17.47■□□□□ 0.39
DDX41-215ENST00000512431 EYA1Q99502 592 aa17.47■□□□□ 0.39
DDX41-215ENST00000512431 RRAGCQ9HB90 399 aa17.47■□□□□ 0.39
DDX41-215ENST00000512431 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
DDX41-215ENST00000512431 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
DDX41-215ENST00000512431 PRELPP51888 382 aa17.46■□□□□ 0.39
DDX41-215ENST00000512431 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
DDX41-215ENST00000512431 NCAPD2Q15021 1401 aa17.46■□□□□ 0.39
DDX41-215ENST00000512431 WASHC2AQ641Q2 1341 aa17.46■□□□□ 0.38
DDX41-215ENST00000512431 KIAA1551Q9HCM1 1747 aa17.45■□□□□ 0.38
DDX41-215ENST00000512431 KCNA3P22001 575 aa17.45■□□□□ 0.38
DDX41-215ENST00000512431 DCAF5Q96JK2 942 aa17.45■□□□□ 0.38
DDX41-215ENST00000512431 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
DDX41-215ENST00000512431 KCPQ6ZWJ8 1503 aa17.44■□□□□ 0.38
DDX41-215ENST00000512431 ERVV-2B6SEH9 535 aa17.44■□□□□ 0.38
DDX41-215ENST00000512431 HSP90AB1P08238 724 aaKnown RBP17.44■□□□□ 0.38
DDX41-215ENST00000512431 C4AP0C0L4 1744 aa17.44■□□□□ 0.38
DDX41-215ENST00000512431 KIF20BQ96Q89 1820 aa17.43■□□□□ 0.38
DDX41-215ENST00000512431 KDRP35968 1356 aa17.42■□□□□ 0.38
DDX41-215ENST00000512431 SLC4A9Q96Q91 983 aa17.42■□□□□ 0.38
DDX41-215ENST00000512431 CARD14Q9BXL6 1004 aa17.41■□□□□ 0.38
DDX41-215ENST00000512431 CABP4P57796 275 aa17.4■□□□□ 0.38
DDX41-215ENST00000512431 ZC3H4Q9UPT8 1303 aaKnown RBP17.39■□□□□ 0.37
DDX41-215ENST00000512431 ARFGEF1Q9Y6D6 1849 aa17.38■□□□□ 0.37
DDX41-215ENST00000512431 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
DDX41-215ENST00000512431 CHRNA5P30532 468 aa17.38■□□□□ 0.37
DDX41-215ENST00000512431 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
DDX41-215ENST00000512431 ZNF831Q5JPB2 1677 aa17.38■□□□□ 0.37
DDX41-215ENST00000512431 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
DDX41-215ENST00000512431 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
DDX41-215ENST00000512431 HSPA1AP0DMV8 641 aaKnown RBP17.37■□□□□ 0.37
DDX41-215ENST00000512431 HSPA1BP0DMV9 641 aaKnown RBP17.37■□□□□ 0.37
DDX41-215ENST00000512431 CRKLP46109 303 aaKnown RBP17.37■□□□□ 0.37
DDX41-215ENST00000512431 FKBP8Q14318 412 aa17.37■□□□□ 0.37
DDX41-215ENST00000512431 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
DDX41-215ENST00000512431 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
DDX41-215ENST00000512431 TNRC6CQ9HCJ0 1690 aaKnown RBP17.36■□□□□ 0.37
DDX41-215ENST00000512431 EIF4A2Q14240 407 aaKnown RBP17.36■□□□□ 0.37
DDX41-215ENST00000512431 USP42Q9H9J4 1324 aaKnown RBP17.36■□□□□ 0.37
DDX41-215ENST00000512431 ZPR1O75312 459 aa17.35■□□□□ 0.37
DDX41-215ENST00000512431 DDR1Q08345 913 aa17.35■□□□□ 0.37
DDX41-215ENST00000512431 AMOTQ4VCS5 1084 aa17.35■□□□□ 0.37
DDX41-215ENST00000512431 GLTPD2A6NH11 291 aa17.34■□□□□ 0.37
DDX41-215ENST00000512431 LMNB1P20700 586 aa17.34■□□□□ 0.37
DDX41-215ENST00000512431 MTHFSP49914 203 aa17.34■□□□□ 0.37
DDX41-215ENST00000512431 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
DDX41-215ENST00000512431 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
DDX41-215ENST00000512431 COL5A3P25940 1745 aaPredicted RBP17.33■□□□□ 0.37
DDX41-215ENST00000512431 POLRMTO00411 1230 aaKnown RBP17.33■□□□□ 0.36
DDX41-215ENST00000512431 RASSF7Q02833 373 aa17.33■□□□□ 0.36
DDX41-215ENST00000512431 TM4SF1P30408 202 aa17.32■□□□□ 0.36
DDX41-215ENST00000512431 TNNT2P45379 298 aaPredicted RBP17.32■□□□□ 0.36
DDX41-215ENST00000512431 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
DDX41-215ENST00000512431 ANKRD26Q9UPS8 1709 aa17.32■□□□□ 0.36
DDX41-215ENST00000512431 DPY19L2Q6NUT2 758 aa17.31■□□□□ 0.36
DDX41-215ENST00000512431 USPL1Q5W0Q7 1092 aa17.3■□□□□ 0.36
DDX41-215ENST00000512431 TTLL6Q8N841 843 aa17.29■□□□□ 0.36
DDX41-215ENST00000512431 KDM6AO15550 1401 aaPredicted RBP17.29■□□□□ 0.36
DDX41-215ENST00000512431 PCNTO95613 3336 aa17.29■□□□□ 0.36
DDX41-215ENST00000512431 INTS5Q6P9B9 1019 aaKnown RBP17.28■□□□□ 0.36
DDX41-215ENST00000512431 SBF1O95248 1867 aa17.28■□□□□ 0.36
DDX41-215ENST00000512431 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
DDX41-215ENST00000512431 H0YIN7 160 aa17.26■□□□□ 0.35
DDX41-215ENST00000512431 C2CD5Q86YS7 1000 aa17.26■□□□□ 0.35
DDX41-215ENST00000512431 SERPINB2P05120 415 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms