RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
CCHCR1-229ENST00000512418 ATP6V1AP38606 617 aa20.08■□□□□ 0.81
CCHCR1-229ENST00000512418 KIF7Q2M1P5 1343 aa20.07■□□□□ 0.8
CCHCR1-229ENST00000512418 ITPK1Q13572 414 aa20.07■□□□□ 0.8
CCHCR1-229ENST00000512418 AMER1Q5JTC6 1135 aaPredicted RBP20.07■□□□□ 0.8
CCHCR1-229ENST00000512418 CD2APQ9Y5K6 639 aa20.07■□□□□ 0.8
CCHCR1-229ENST00000512418 KDRP35968 1356 aa20.07■□□□□ 0.8
CCHCR1-229ENST00000512418 ZNF831Q5JPB2 1677 aa20.07■□□□□ 0.8
CCHCR1-229ENST00000512418 KDM6AO15550 1401 aaPredicted RBP20.06■□□□□ 0.8
CCHCR1-229ENST00000512418 ZNF530Q6P9A1 599 aaPredicted RBP20.06■□□□□ 0.8
CCHCR1-229ENST00000512418 AEBP1Q8IUX7 1158 aa20.06■□□□□ 0.8
CCHCR1-229ENST00000512418 GNPATO15228 680 aa20.05■□□□□ 0.8
CCHCR1-229ENST00000512418 C1orf141Q5JVX7 400 aa20.04■□□□□ 0.8
CCHCR1-229ENST00000512418 SULT6B1Q6IMI4 303 aa20.04■□□□□ 0.8
CCHCR1-229ENST00000512418 SMIM5Q71RC9 77 aa20.04■□□□□ 0.8
CCHCR1-229ENST00000512418 GRIN3BO60391 1043 aa20.03■□□□□ 0.8
CCHCR1-229ENST00000512418 YBX3P16989 372 aaKnown RBP eCLIP20.03■□□□□ 0.8
CCHCR1-229ENST00000512418 IL13P35225 146 aa20.03■□□□□ 0.8
CCHCR1-229ENST00000512418 MTHFSP49914 203 aa20.01■□□□□ 0.79
CCHCR1-229ENST00000512418 CABP4P57796 275 aa20.01■□□□□ 0.79
CCHCR1-229ENST00000512418 RBM42Q9BTD8 480 aaKnown RBP20.01■□□□□ 0.79
CCHCR1-229ENST00000512418 COL5A3P25940 1745 aaPredicted RBP20.01■□□□□ 0.79
CCHCR1-229ENST00000512418 SLC4A9Q96Q91 983 aa20■□□□□ 0.79
CCHCR1-229ENST00000512418 RTCBQ9Y3I0 505 aaKnown RBP19.99■□□□□ 0.79
CCHCR1-229ENST00000512418 CNTNAP4Q9C0A0 1308 aa19.99■□□□□ 0.79
CCHCR1-229ENST00000512418 RC3H1Q5TC82 1133 aaKnown RBP19.98■□□□□ 0.79
CCHCR1-229ENST00000512418 PER1O15534 1290 aaPredicted RBP19.97■□□□□ 0.79
CCHCR1-229ENST00000512418 ADRA2BP18089 450 aa19.97■□□□□ 0.79
CCHCR1-229ENST00000512418 TRAPPC3LQ5T215 181 aa19.97■□□□□ 0.79
CCHCR1-229ENST00000512418 SCN11AQ9UI33 1791 aa19.97■□□□□ 0.79
CCHCR1-229ENST00000512418 NFATC2IPQ8NCF5 419 aa19.96■□□□□ 0.79
CCHCR1-229ENST00000512418 AKAP4Q5JQC9 854 aa19.95■□□□□ 0.78
CCHCR1-229ENST00000512418 CICQ96RK0 1608 aaPredicted RBP19.94■□□□□ 0.78
CCHCR1-229ENST00000512418 PTCD1O75127 700 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-229ENST00000512418 MMP10P09238 476 aa19.94■□□□□ 0.78
CCHCR1-229ENST00000512418 CC2D1BQ5T0F9 858 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-229ENST00000512418 RPS6KA4O75676 772 aa19.93■□□□□ 0.78
CCHCR1-229ENST00000512418 NLGN1Q8N2Q7 840 aa19.93■□□□□ 0.78
CCHCR1-229ENST00000512418 ARHGEF1Q92888 912 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-229ENST00000512418 NPC1L1Q9UHC9 1359 aa19.93■□□□□ 0.78
CCHCR1-229ENST00000512418 MYH14Q7Z406 1995 aaKnown RBP19.92■□□□□ 0.78
CCHCR1-229ENST00000512418 DIAPH1O60610 1272 aaKnown RBP19.92■□□□□ 0.78
CCHCR1-229ENST00000512418 HMOX1P09601 288 aa19.92■□□□□ 0.78
CCHCR1-229ENST00000512418 C4AP0C0L4 1744 aa19.92■□□□□ 0.78
CCHCR1-229ENST00000512418 MRC1P22897 1456 aa19.92■□□□□ 0.78
CCHCR1-229ENST00000512418 TJP1Q07157 1748 aa19.91■□□□□ 0.78
CCHCR1-229ENST00000512418 KIF13BQ9NQT8 1826 aa19.91■□□□□ 0.78
CCHCR1-229ENST00000512418 RFC4P35249 363 aa19.91■□□□□ 0.78
CCHCR1-229ENST00000512418 C1QTNF8P60827 252 aa19.91■□□□□ 0.78
CCHCR1-229ENST00000512418 GIGYF1O75420 1035 aaPredicted RBP19.9■□□□□ 0.78
CCHCR1-229ENST00000512418 SLC52A2Q9HAB3 445 aa19.9■□□□□ 0.78
CCHCR1-229ENST00000512418 GYS1P13807 737 aa19.89■□□□□ 0.77
CCHCR1-229ENST00000512418 CRKLP46109 303 aaKnown RBP19.89■□□□□ 0.77
CCHCR1-229ENST00000512418 PXDNLA1KZ92 1463 aa19.88■□□□□ 0.77
CCHCR1-229ENST00000512418 C10orf71Q711Q0 1435 aa19.88■□□□□ 0.77
CCHCR1-229ENST00000512418 LGR6Q9HBX8 967 aa19.88■□□□□ 0.77
CCHCR1-229ENST00000512418 WWC3Q9ULE0 1092 aa19.88■□□□□ 0.77
CCHCR1-229ENST00000512418 VIRMAQ69YN4 1812 aaKnown RBP19.88■□□□□ 0.77
CCHCR1-229ENST00000512418 ADAMTS7Q9UKP4 1686 aa19.87■□□□□ 0.77
CCHCR1-229ENST00000512418 COL3A1P02461 1466 aaPredicted RBP19.87■□□□□ 0.77
CCHCR1-229ENST00000512418 ATP10DQ9P241 1426 aa19.87■□□□□ 0.77
CCHCR1-229ENST00000512418 RNMTO43148 476 aaKnown RBP19.87■□□□□ 0.77
CCHCR1-229ENST00000512418 KIAA1551Q9HCM1 1747 aa19.87■□□□□ 0.77
CCHCR1-229ENST00000512418 ADCY9O60503 1353 aa19.86■□□□□ 0.77
CCHCR1-229ENST00000512418 TGFB2P61812 414 aa19.86■□□□□ 0.77
CCHCR1-229ENST00000512418 MTHFSDQ2M296 383 aaKnown RBP19.86■□□□□ 0.77
CCHCR1-229ENST00000512418 CCDC87Q9NVE4 849 aa19.86■□□□□ 0.77
CCHCR1-229ENST00000512418 USP42Q9H9J4 1324 aaKnown RBP19.85■□□□□ 0.77
CCHCR1-229ENST00000512418 PARP3Q9Y6F1 533 aa19.85■□□□□ 0.77
CCHCR1-229ENST00000512418 N4BP2Q86UW6 1770 aaPredicted RBP19.83■□□□□ 0.77
CCHCR1-229ENST00000512418 KCPQ6ZWJ8 1503 aa19.83■□□□□ 0.77
CCHCR1-229ENST00000512418 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
CCHCR1-229ENST00000512418 CNGB1Q14028 1251 aaPredicted RBP19.83■□□□□ 0.77
CCHCR1-229ENST00000512418 INTS5Q6P9B9 1019 aaKnown RBP19.83■□□□□ 0.77
CCHCR1-229ENST00000512418 DNAJC10Q8IXB1 793 aa19.83■□□□□ 0.77
CCHCR1-229ENST00000512418 U2SURPO15042 1029 aaKnown RBP19.82■□□□□ 0.76
CCHCR1-229ENST00000512418 SLC39A6Q13433 755 aa19.82■□□□□ 0.76
CCHCR1-229ENST00000512418 SRP68Q9UHB9 627 aaKnown RBP19.82■□□□□ 0.76
CCHCR1-229ENST00000512418 UBR2Q8IWV8 1755 aa19.8■□□□□ 0.76
CCHCR1-229ENST00000512418 A0A0G2JLW4 131 aa19.8■□□□□ 0.76
CCHCR1-229ENST00000512418 FKBP8Q14318 412 aa19.8■□□□□ 0.76
CCHCR1-229ENST00000512418 VSIG10Q8N0Z9 540 aa19.8■□□□□ 0.76
CCHCR1-229ENST00000512418 GPBP1L1Q9HC44 474 aaPredicted RBP19.8■□□□□ 0.76
CCHCR1-229ENST00000512418 SOS1Q07889 1333 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-229ENST00000512418 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-229ENST00000512418 GAS2L2Q8NHY3 880 aa19.79■□□□□ 0.76
CCHCR1-229ENST00000512418 BCS1LQ9Y276 419 aa19.79■□□□□ 0.76
CCHCR1-229ENST00000512418 BRCA1P38398 1863 aaKnown RBP19.79■□□□□ 0.76
CCHCR1-229ENST00000512418 ZPR1O75312 459 aa19.78■□□□□ 0.76
CCHCR1-229ENST00000512418 DPEP1P16444 411 aa19.78■□□□□ 0.76
CCHCR1-229ENST00000512418 DDR1Q08345 913 aa19.77■□□□□ 0.76
CCHCR1-229ENST00000512418 CFAP53Q96M91 514 aa19.77■□□□□ 0.76
CCHCR1-229ENST00000512418 COL15A1P39059 1388 aa19.77■□□□□ 0.76
CCHCR1-229ENST00000512418 GNAT3A8MTJ3 354 aa19.76■□□□□ 0.75
CCHCR1-229ENST00000512418 TEFQ10587 303 aa19.76■□□□□ 0.75
CCHCR1-229ENST00000512418 USPL1Q5W0Q7 1092 aa19.76■□□□□ 0.75
CCHCR1-229ENST00000512418 TTC5Q8N0Z6 440 aa19.76■□□□□ 0.75
CCHCR1-229ENST00000512418 ZBTB1Q9Y2K1 713 aa19.76■□□□□ 0.75
CCHCR1-229ENST00000512418 POLRMTO00411 1230 aaKnown RBP19.75■□□□□ 0.75
CCHCR1-229ENST00000512418 ZNF526Q8TF50 670 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms