RNA–Protein interactions for RNA: ENST00000512374.1

SLC1A3-211, Transcript of solute carrier family 1 member 3, humanhuman

TSL 1 (best)

Gene SLC1A3, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-211ENST00000512374 BTAF1O14981 1849 aa13.53□□□□□ -0.24
SLC1A3-211ENST00000512374 SOX12O15370 315 aa13.53□□□□□ -0.24
SLC1A3-211ENST00000512374 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
SLC1A3-211ENST00000512374 HOXC9P31274 260 aa13.52□□□□□ -0.25
SLC1A3-211ENST00000512374 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
SLC1A3-211ENST00000512374 LRRC4BQ9NT99 713 aa13.52□□□□□ -0.25
SLC1A3-211ENST00000512374 MYOM1P52179 1685 aa13.52□□□□□ -0.25
SLC1A3-211ENST00000512374 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
SLC1A3-211ENST00000512374 MAP3K19Q56UN5 1328 aa13.51□□□□□ -0.25
SLC1A3-211ENST00000512374 AMPHP49418 695 aa13.51□□□□□ -0.25
SLC1A3-211ENST00000512374 TMF1P82094 1093 aa13.51□□□□□ -0.25
SLC1A3-211ENST00000512374 TPRNQ4KMQ1 711 aa13.51□□□□□ -0.25
SLC1A3-211ENST00000512374 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
SLC1A3-211ENST00000512374 INSRP06213 1382 aa13.5□□□□□ -0.25
SLC1A3-211ENST00000512374 GRIN3BO60391 1043 aa13.5□□□□□ -0.25
SLC1A3-211ENST00000512374 ACSBG1Q96GR2 724 aa13.5□□□□□ -0.25
SLC1A3-211ENST00000512374 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
SLC1A3-211ENST00000512374 GSE1Q14687 1217 aa13.49□□□□□ -0.25
SLC1A3-211ENST00000512374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.25
SLC1A3-211ENST00000512374 LY75O60449 1722 aa13.49□□□□□ -0.25
SLC1A3-211ENST00000512374 NSD3Q9BZ95 1437 aa13.48□□□□□ -0.25
SLC1A3-211ENST00000512374 USP47Q96K76 1375 aa13.48□□□□□ -0.25
SLC1A3-211ENST00000512374 FYB1O15117 783 aa13.48□□□□□ -0.25
SLC1A3-211ENST00000512374 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
SLC1A3-211ENST00000512374 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
SLC1A3-211ENST00000512374 RAPGEF4Q8WZA2 1011 aa13.48□□□□□ -0.25
SLC1A3-211ENST00000512374 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
SLC1A3-211ENST00000512374 PCDHB8Q9UN66 801 aa13.48□□□□□ -0.25
SLC1A3-211ENST00000512374 PNPLA7Q6ZV29 1317 aa13.47□□□□□ -0.25
SLC1A3-211ENST00000512374 PCDH11XQ9BZA7 1347 aa13.47□□□□□ -0.25
SLC1A3-211ENST00000512374 PCDH11YQ9BZA8 1340 aa13.47□□□□□ -0.25
SLC1A3-211ENST00000512374 POTEMA6NI47 508 aa13.47□□□□□ -0.25
SLC1A3-211ENST00000512374 ZNF827Q17R98 1081 aa13.47□□□□□ -0.25
SLC1A3-211ENST00000512374 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
SLC1A3-211ENST00000512374 FLT4P35916 1363 aa13.46□□□□□ -0.25
SLC1A3-211ENST00000512374 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
SLC1A3-211ENST00000512374 CLSPNQ9HAW4 1339 aa13.45□□□□□ -0.26
SLC1A3-211ENST00000512374 TATP17735 454 aaPredicted RBP13.45□□□□□ -0.26
SLC1A3-211ENST00000512374 TRIM26Q12899 539 aaPredicted RBP13.45□□□□□ -0.26
SLC1A3-211ENST00000512374 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
SLC1A3-211ENST00000512374 NCAPD2Q15021 1401 aa13.45□□□□□ -0.26
SLC1A3-211ENST00000512374 PLCG2P16885 1265 aa13.44□□□□□ -0.26
SLC1A3-211ENST00000512374 GPR162Q16538 588 aa13.44□□□□□ -0.26
SLC1A3-211ENST00000512374 NBPF6Q5VWK0 638 aa13.44□□□□□ -0.26
SLC1A3-211ENST00000512374 POTEGQ6S5H5 508 aa13.44□□□□□ -0.26
SLC1A3-211ENST00000512374 NBPF4Q96M43 638 aa13.44□□□□□ -0.26
SLC1A3-211ENST00000512374 CCNL1Q9UK58 526 aaPredicted RBP13.44□□□□□ -0.26
SLC1A3-211ENST00000512374 C1QTNF8P60827 252 aa13.43□□□□□ -0.26
SLC1A3-211ENST00000512374 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
SLC1A3-211ENST00000512374 MEGF6O75095 1541 aa13.42□□□□□ -0.26
SLC1A3-211ENST00000512374 UTRNP46939 3433 aa13.42□□□□□ -0.26
SLC1A3-211ENST00000512374 IRX5P78411 483 aaPredicted RBP13.41□□□□□ -0.26
SLC1A3-211ENST00000512374 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
SLC1A3-211ENST00000512374 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
SLC1A3-211ENST00000512374 SHANK3Q9BYB0 1731 aa13.4□□□□□ -0.26
SLC1A3-211ENST00000512374 LTV1Q96GA3 475 aaPredicted RBP13.4□□□□□ -0.26
SLC1A3-211ENST00000512374 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
SLC1A3-211ENST00000512374 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
SLC1A3-211ENST00000512374 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
SLC1A3-211ENST00000512374 SSFA2P28290 1259 aa13.38□□□□□ -0.27
SLC1A3-211ENST00000512374 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
SLC1A3-211ENST00000512374 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
SLC1A3-211ENST00000512374 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
SLC1A3-211ENST00000512374 PALLDQ8WX93 1383 aa13.37□□□□□ -0.27
SLC1A3-211ENST00000512374 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
SLC1A3-211ENST00000512374 RRS1Q15050 365 aaKnown RBP13.37□□□□□ -0.27
SLC1A3-211ENST00000512374 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
SLC1A3-211ENST00000512374 LCE2DQ5TA82 110 aaPredicted RBP13.37□□□□□ -0.27
SLC1A3-211ENST00000512374 FAM163AQ96GL9 167 aaPredicted RBP13.37□□□□□ -0.27
SLC1A3-211ENST00000512374 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
SLC1A3-211ENST00000512374 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
SLC1A3-211ENST00000512374 CYP27B1O15528 508 aa13.36□□□□□ -0.27
SLC1A3-211ENST00000512374 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
SLC1A3-211ENST00000512374 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
SLC1A3-211ENST00000512374 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
SLC1A3-211ENST00000512374 C5P01031 1676 aa13.35□□□□□ -0.27
SLC1A3-211ENST00000512374 TULP1O00294 542 aaPredicted RBP13.35□□□□□ -0.27
SLC1A3-211ENST00000512374 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
SLC1A3-211ENST00000512374 ANKRD26Q9UPS8 1709 aa13.35□□□□□ -0.27
SLC1A3-211ENST00000512374 TUBGCP6Q96RT7 1819 aa13.34□□□□□ -0.27
SLC1A3-211ENST00000512374 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
SLC1A3-211ENST00000512374 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
SLC1A3-211ENST00000512374 OCEL1Q9H607 264 aa13.34□□□□□ -0.27
SLC1A3-211ENST00000512374 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
SLC1A3-211ENST00000512374 KIF20BQ96Q89 1820 aa13.34□□□□□ -0.27
SLC1A3-211ENST00000512374 RGPD2P0DJD1 1756 aa13.33□□□□□ -0.28
SLC1A3-211ENST00000512374 ERVV-2B6SEH9 535 aa13.33□□□□□ -0.28
SLC1A3-211ENST00000512374 AK7Q96M32 723 aa13.33□□□□□ -0.28
SLC1A3-211ENST00000512374 CARD14Q9BXL6 1004 aa13.33□□□□□ -0.28
SLC1A3-211ENST00000512374 LOC102724428A0A0B4J2F2 783 aa13.32□□□□□ -0.28
SLC1A3-211ENST00000512374 SIK1P57059 783 aa13.32□□□□□ -0.28
SLC1A3-211ENST00000512374 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
SLC1A3-211ENST00000512374 MPRIPQ6WCQ1 1025 aa13.32□□□□□ -0.28
SLC1A3-211ENST00000512374 C4BP0C0L5 1744 aa13.31□□□□□ -0.28
SLC1A3-211ENST00000512374 FBLN1P23142 703 aa13.31□□□□□ -0.28
SLC1A3-211ENST00000512374 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
SLC1A3-211ENST00000512374 NLGN1Q8N2Q7 840 aa13.31□□□□□ -0.28
SLC1A3-211ENST00000512374 NLGN2Q8NFZ4 835 aa13.31□□□□□ -0.28
SLC1A3-211ENST00000512374 PIGBQ92521 554 aa13.31□□□□□ -0.28
SLC1A3-211ENST00000512374 TMOD3Q9NYL9 352 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms