RNA–Protein interactions for RNA: ENST00000512086.5

CAGE1-208, Transcript of cancer antigen 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAGE1, Length 2,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-208ENST00000512086 FHDC1Q9C0D6 1143 aaPredicted RBP10.16□□□□□ -0.78
CAGE1-208ENST00000512086 TMOD3Q9NYL9 352 aa10.16□□□□□ -0.78
CAGE1-208ENST00000512086 IL13P35225 146 aa10.16□□□□□ -0.78
CAGE1-208ENST00000512086 SCN11AQ9UI33 1791 aa10.16□□□□□ -0.78
CAGE1-208ENST00000512086 CHD4Q14839 1912 aa10.16□□□□□ -0.78
CAGE1-208ENST00000512086 COL5A3P25940 1745 aaPredicted RBP10.16□□□□□ -0.78
CAGE1-208ENST00000512086 ADAMTS7Q9UKP4 1686 aa10.15□□□□□ -0.78
CAGE1-208ENST00000512086 KDM6AO15550 1401 aaPredicted RBP10.15□□□□□ -0.79
CAGE1-208ENST00000512086 LOC102724428A0A0B4J2F2 783 aa10.14□□□□□ -0.79
CAGE1-208ENST00000512086 SSFA2P28290 1259 aa10.14□□□□□ -0.79
CAGE1-208ENST00000512086 SIK1P57059 783 aa10.14□□□□□ -0.79
CAGE1-208ENST00000512086 COL23A1Q86Y22 540 aaPredicted RBP10.14□□□□□ -0.79
CAGE1-208ENST00000512086 MRC1P22897 1456 aa10.14□□□□□ -0.79
CAGE1-208ENST00000512086 KCNQ4P56696 695 aa10.14□□□□□ -0.79
CAGE1-208ENST00000512086 COL3A1P02461 1466 aaPredicted RBP10.14□□□□□ -0.79
CAGE1-208ENST00000512086 ZNF530Q6P9A1 599 aaPredicted RBP10.13□□□□□ -0.79
CAGE1-208ENST00000512086 ATG3Q9NT62 314 aa10.13□□□□□ -0.79
CAGE1-208ENST00000512086 VIRMAQ69YN4 1812 aaKnown RBP10.13□□□□□ -0.79
CAGE1-208ENST00000512086 AK7Q96M32 723 aa10.12□□□□□ -0.79
CAGE1-208ENST00000512086 RC3H1Q5TC82 1133 aaKnown RBP10.12□□□□□ -0.79
CAGE1-208ENST00000512086 YY1P25490 414 aa10.11□□□□□ -0.79
CAGE1-208ENST00000512086 MTHFSP49914 203 aa10.11□□□□□ -0.79
CAGE1-208ENST00000512086 C1orf141Q5JVX7 400 aa10.11□□□□□ -0.79
CAGE1-208ENST00000512086 SULT6B1Q6IMI4 303 aa10.11□□□□□ -0.79
CAGE1-208ENST00000512086 AEBP1Q8IUX7 1158 aa10.11□□□□□ -0.79
CAGE1-208ENST00000512086 ASAP1Q9ULH1 1129 aa10.11□□□□□ -0.79
CAGE1-208ENST00000512086 CNTNAP4Q9C0A0 1308 aa10.11□□□□□ -0.79
CAGE1-208ENST00000512086 AKAP4Q5JQC9 854 aa10.11□□□□□ -0.79
CAGE1-208ENST00000512086 LINC00116Q8NCU8 138 aa10.11□□□□□ -0.79
CAGE1-208ENST00000512086 ADRA2BP18089 450 aa10.1□□□□□ -0.79
CAGE1-208ENST00000512086 MIER1Q8N108 512 aa10.1□□□□□ -0.79
CAGE1-208ENST00000512086 CD2APQ9Y5K6 639 aa10.1□□□□□ -0.79
CAGE1-208ENST00000512086 KIF13BQ9NQT8 1826 aa10.1□□□□□ -0.79
CAGE1-208ENST00000512086 TJP1Q07157 1748 aa10.1□□□□□ -0.79
CAGE1-208ENST00000512086 ATP6V1AP38606 617 aa10.1□□□□□ -0.79
CAGE1-208ENST00000512086 ITPK1Q13572 414 aa10.1□□□□□ -0.79
CAGE1-208ENST00000512086 DIAPH1O60610 1272 aaKnown RBP10.09□□□□□ -0.79
CAGE1-208ENST00000512086 CABP4P57796 275 aa10.09□□□□□ -0.79
CAGE1-208ENST00000512086 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
CAGE1-208ENST00000512086 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.09□□□□□ -0.79
CAGE1-208ENST00000512086 MSH5O43196 834 aa10.08□□□□□ -0.8
CAGE1-208ENST00000512086 UBR2Q8IWV8 1755 aa10.08□□□□□ -0.8
CAGE1-208ENST00000512086 MYH14Q7Z406 1995 aaKnown RBP10.08□□□□□ -0.8
CAGE1-208ENST00000512086 C4AP0C0L4 1744 aa10.08□□□□□ -0.8
CAGE1-208ENST00000512086 CC2D1BQ5T0F9 858 aaKnown RBP10.07□□□□□ -0.8
CAGE1-208ENST00000512086 SLC4A9Q96Q91 983 aa10.07□□□□□ -0.8
CAGE1-208ENST00000512086 SIPA1L3O60292 1781 aaPredicted RBP10.07□□□□□ -0.8
CAGE1-208ENST00000512086 GNPATO15228 680 aa10.07□□□□□ -0.8
CAGE1-208ENST00000512086 AMIGO3Q86WK7 504 aa10.07□□□□□ -0.8
CAGE1-208ENST00000512086 SLC52A2Q9HAB3 445 aa10.07□□□□□ -0.8
CAGE1-208ENST00000512086 GRIN3BO60391 1043 aa10.06□□□□□ -0.8
CAGE1-208ENST00000512086 RPS6KA4O75676 772 aa10.06□□□□□ -0.8
CAGE1-208ENST00000512086 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
CAGE1-208ENST00000512086 KCPQ6ZWJ8 1503 aa10.06□□□□□ -0.8
CAGE1-208ENST00000512086 RNMTO43148 476 aaKnown RBP10.05□□□□□ -0.8
CAGE1-208ENST00000512086 NFATC2IPQ8NCF5 419 aa10.05□□□□□ -0.8
CAGE1-208ENST00000512086 NLGN2Q8NFZ4 835 aa10.05□□□□□ -0.8
CAGE1-208ENST00000512086 KIAA1551Q9HCM1 1747 aa10.05□□□□□ -0.8
CAGE1-208ENST00000512086 GPR162Q16538 588 aa10.05□□□□□ -0.8
CAGE1-208ENST00000512086 TRAPPC3LQ5T215 181 aa10.05□□□□□ -0.8
CAGE1-208ENST00000512086 ERICH6BQ5W0A0 696 aa10.05□□□□□ -0.8
CAGE1-208ENST00000512086 MSL1Q68DK7 614 aa10.05□□□□□ -0.8
CAGE1-208ENST00000512086 NLGN1Q8N2Q7 840 aa10.05□□□□□ -0.8
CAGE1-208ENST00000512086 CFAP53Q96M91 514 aa10.05□□□□□ -0.8
CAGE1-208ENST00000512086 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
CAGE1-208ENST00000512086 PHF14O94880 888 aa10.04□□□□□ -0.8
CAGE1-208ENST00000512086 MTHFSDQ2M296 383 aaKnown RBP10.04□□□□□ -0.8
CAGE1-208ENST00000512086 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
CAGE1-208ENST00000512086 GAS2L2Q8NHY3 880 aa10.04□□□□□ -0.8
CAGE1-208ENST00000512086 C10orf71Q711Q0 1435 aa10.04□□□□□ -0.8
CAGE1-208ENST00000512086 HMOX1P09601 288 aa10.04□□□□□ -0.8
CAGE1-208ENST00000512086 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
CAGE1-208ENST00000512086 CRKLP46109 303 aaKnown RBP10.02□□□□□ -0.8
CAGE1-208ENST00000512086 ARHGEF1Q92888 912 aaKnown RBP10.02□□□□□ -0.8
CAGE1-208ENST00000512086 CEMIPQ8WUJ3 1361 aa10.02□□□□□ -0.81
CAGE1-208ENST00000512086 NEFLP07196 543 aa10.02□□□□□ -0.81
CAGE1-208ENST00000512086 ZNF784Q8NCA9 323 aaPredicted RBP10.02□□□□□ -0.81
CAGE1-208ENST00000512086 LGR6Q9HBX8 967 aa10.02□□□□□ -0.81
CAGE1-208ENST00000512086 NUDCQ9Y266 331 aa10.02□□□□□ -0.81
CAGE1-208ENST00000512086 BRCA1P38398 1863 aaKnown RBP10.02□□□□□ -0.81
CAGE1-208ENST00000512086 GYS1P13807 737 aa10.01□□□□□ -0.81
CAGE1-208ENST00000512086 YBX3P16989 372 aaKnown RBP eCLIP10.01□□□□□ -0.81
CAGE1-208ENST00000512086 PPP2R1AP30153 589 aa10.01□□□□□ -0.81
CAGE1-208ENST00000512086 USP42Q9H9J4 1324 aaKnown RBP10.01□□□□□ -0.81
CAGE1-208ENST00000512086 GNAT3A8MTJ3 354 aa10.01□□□□□ -0.81
CAGE1-208ENST00000512086 PTCD1O75127 700 aaKnown RBP10.01□□□□□ -0.81
CAGE1-208ENST00000512086 MMP10P09238 476 aa10.01□□□□□ -0.81
CAGE1-208ENST00000512086 RFC4P35249 363 aa10.01□□□□□ -0.81
CAGE1-208ENST00000512086 TGFB2P61812 414 aa10.01□□□□□ -0.81
CAGE1-208ENST00000512086 SOS1Q07889 1333 aaPredicted RBP10□□□□□ -0.81
CAGE1-208ENST00000512086 PXDNLA1KZ92 1463 aa10□□□□□ -0.81
CAGE1-208ENST00000512086 INTS5Q6P9B9 1019 aaKnown RBP10□□□□□ -0.81
CAGE1-208ENST00000512086 RSPH6AQ9H0K4 717 aa10□□□□□ -0.81
CAGE1-208ENST00000512086 CCDC87Q9NVE4 849 aa10□□□□□ -0.81
CAGE1-208ENST00000512086 NRXN2Q9P2S2 1712 aa10□□□□□ -0.81
CAGE1-208ENST00000512086 U2SURPO15042 1029 aaKnown RBP10□□□□□ -0.81
CAGE1-208ENST00000512086 FCHSD2O94868 740 aa10□□□□□ -0.81
CAGE1-208ENST00000512086 CYP19A1P11511 503 aaPredicted RBP10□□□□□ -0.81
CAGE1-208ENST00000512086 PDIA4P13667 645 aaKnown RBP10□□□□□ -0.81
CAGE1-208ENST00000512086 ARFGEF1Q9Y6D6 1849 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms