RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 C4orf17Q53FE4 359 aa11.8□□□□□ -0.52
PDGFC-207ENST00000511985 ADAMTS19Q8TE59 1207 aa11.8□□□□□ -0.52
PDGFC-207ENST00000511985 GTPBP3Q969Y2 492 aaKnown RBP11.8□□□□□ -0.52
PDGFC-207ENST00000511985 GMCL1Q96IK5 515 aa11.8□□□□□ -0.52
PDGFC-207ENST00000511985 GPAMQ9HCL2 828 aa11.8□□□□□ -0.52
PDGFC-207ENST00000511985 H7C1W4 665 aa11.79□□□□□ -0.52
PDGFC-207ENST00000511985 INHAP05111 366 aa11.79□□□□□ -0.52
PDGFC-207ENST00000511985 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
PDGFC-207ENST00000511985 ZNF385CQ66K41 422 aaPredicted RBP11.79□□□□□ -0.52
PDGFC-207ENST00000511985 SLURP2P0DP57 97 aa11.78□□□□□ -0.52
PDGFC-207ENST00000511985 GTF2E1P29083 439 aaPredicted RBP11.78□□□□□ -0.52
PDGFC-207ENST00000511985 CLUAP1Q96AJ1 413 aa11.78□□□□□ -0.52
PDGFC-207ENST00000511985 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
PDGFC-207ENST00000511985 THBS1P07996 1170 aa11.77□□□□□ -0.53
PDGFC-207ENST00000511985 EML3Q32P44 896 aa11.77□□□□□ -0.53
PDGFC-207ENST00000511985 SVOPQ8N4V2 548 aa11.77□□□□□ -0.53
PDGFC-207ENST00000511985 NUCKS1Q9H1E3 243 aaKnown RBP11.77□□□□□ -0.53
PDGFC-207ENST00000511985 SERTAD1Q9UHV2 236 aa11.77□□□□□ -0.53
PDGFC-207ENST00000511985 TMEM229AB2RXF0 380 aa11.76□□□□□ -0.53
PDGFC-207ENST00000511985 NCOA4Q13772 614 aa11.76□□□□□ -0.53
PDGFC-207ENST00000511985 FOXR1Q6PIV2 292 aa11.76□□□□□ -0.53
PDGFC-207ENST00000511985 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
PDGFC-207ENST00000511985 DEPDC4Q8N2C3 294 aa11.76□□□□□ -0.53
PDGFC-207ENST00000511985 RHBDD1Q8TEB9 315 aa11.76□□□□□ -0.53
PDGFC-207ENST00000511985 PCDHGA11Q9Y5H2 935 aa11.76□□□□□ -0.53
PDGFC-207ENST00000511985 A0A1B0GTH6 734 aa11.75□□□□□ -0.53
PDGFC-207ENST00000511985 SRSF11Q05519 484 aaKnown RBP11.75□□□□□ -0.53
PDGFC-207ENST00000511985 HDGFL1Q5TGJ6 251 aa11.74□□□□□ -0.53
PDGFC-207ENST00000511985 USP17L5A8MUK1 530 aa11.73□□□□□ -0.53
PDGFC-207ENST00000511985 MSX1P28360 303 aa11.73□□□□□ -0.53
PDGFC-207ENST00000511985 SMTNP53814 917 aa11.73□□□□□ -0.53
PDGFC-207ENST00000511985 LYPD4Q6UWN0 246 aa11.73□□□□□ -0.53
PDGFC-207ENST00000511985 NFATC2IPQ8NCF5 419 aa11.73□□□□□ -0.53
PDGFC-207ENST00000511985 RUBCNLQ9H714 662 aa11.73□□□□□ -0.53
PDGFC-207ENST00000511985 MBIPQ9NS73 344 aa11.73□□□□□ -0.53
PDGFC-207ENST00000511985 NOD1Q9Y239 953 aa11.73□□□□□ -0.53
PDGFC-207ENST00000511985 PLA2G4AP47712 749 aa11.72□□□□□ -0.53
PDGFC-207ENST00000511985 GTF2IP78347 998 aa11.72□□□□□ -0.53
PDGFC-207ENST00000511985 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
PDGFC-207ENST00000511985 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
PDGFC-207ENST00000511985 UCN2Q96RP3 112 aa11.72□□□□□ -0.53
PDGFC-207ENST00000511985 ADAMTS8Q9UP79 889 aa11.72□□□□□ -0.53
PDGFC-207ENST00000511985 A6NJR5 290 aa11.71□□□□□ -0.53
PDGFC-207ENST00000511985 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
PDGFC-207ENST00000511985 USP3Q9Y6I4 520 aa11.71□□□□□ -0.53
PDGFC-207ENST00000511985 IGF1RP08069 1367 aa11.7□□□□□ -0.54
PDGFC-207ENST00000511985 LZTS3O60299 673 aaPredicted RBP11.69□□□□□ -0.54
PDGFC-207ENST00000511985 ARHGEF15O94989 841 aa11.69□□□□□ -0.54
PDGFC-207ENST00000511985 PSME1Q06323 249 aa11.69□□□□□ -0.54
PDGFC-207ENST00000511985 FNBP4Q8N3X1 1017 aaPredicted RBP11.69□□□□□ -0.54
PDGFC-207ENST00000511985 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDGFC-207ENST00000511985 SLC4A9Q96Q91 983 aa11.69□□□□□ -0.54
PDGFC-207ENST00000511985 A6NJY4 79 aa11.68□□□□□ -0.54
PDGFC-207ENST00000511985 UBAP2LQ14157 1087 aaKnown RBP11.68□□□□□ -0.54
PDGFC-207ENST00000511985 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
PDGFC-207ENST00000511985 CELA2BP08218 269 aaPredicted RBP11.67□□□□□ -0.54
PDGFC-207ENST00000511985 CSB-PGBD3P0DP91 1061 aa11.67□□□□□ -0.54
PDGFC-207ENST00000511985 MX2P20592 715 aa11.67□□□□□ -0.54
PDGFC-207ENST00000511985 MTFR1Q15390 333 aa11.67□□□□□ -0.54
PDGFC-207ENST00000511985 PGBD3Q8N328 593 aa11.67□□□□□ -0.54
PDGFC-207ENST00000511985 AIDAQ96BJ3 306 aa11.67□□□□□ -0.54
PDGFC-207ENST00000511985 NIFKQ9BYG3 293 aaKnown RBP11.67□□□□□ -0.54
PDGFC-207ENST00000511985 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
PDGFC-207ENST00000511985 C14orf37Q86TY3 774 aa11.66□□□□□ -0.54
PDGFC-207ENST00000511985 ZNF295-AS1Q8N0V1 137 aa11.66□□□□□ -0.54
PDGFC-207ENST00000511985 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
PDGFC-207ENST00000511985 ZNF358Q9NW07 568 aa11.66□□□□□ -0.54
PDGFC-207ENST00000511985 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
PDGFC-207ENST00000511985 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
PDGFC-207ENST00000511985 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.54
PDGFC-207ENST00000511985 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
PDGFC-207ENST00000511985 KIAA1024Q9UPX6 916 aa11.65□□□□□ -0.54
PDGFC-207ENST00000511985 CDK2AP1O14519 115 aa11.64□□□□□ -0.55
PDGFC-207ENST00000511985 ATP9BO43861 1147 aa11.64□□□□□ -0.55
PDGFC-207ENST00000511985 ATP4AP20648 1035 aa11.64□□□□□ -0.55
PDGFC-207ENST00000511985 EFHC2Q5JST6 749 aa11.64□□□□□ -0.55
PDGFC-207ENST00000511985 GLMNQ92990 594 aa11.64□□□□□ -0.55
PDGFC-207ENST00000511985 ACDQ96AP0 544 aa11.64□□□□□ -0.55
PDGFC-207ENST00000511985 CFHR5Q9BXR6 569 aa11.64□□□□□ -0.55
PDGFC-207ENST00000511985 CABP1Q9NZU7 370 aa11.64□□□□□ -0.55
PDGFC-207ENST00000511985 MAP3K10Q02779 954 aa11.63□□□□□ -0.55
PDGFC-207ENST00000511985 LBRQ14739 615 aaKnown RBP11.63□□□□□ -0.55
PDGFC-207ENST00000511985 PLEKHM2Q8IWE5 1019 aa11.63□□□□□ -0.55
PDGFC-207ENST00000511985 CRISPLD1Q9H336 500 aa11.63□□□□□ -0.55
PDGFC-207ENST00000511985 PARP3Q9Y6F1 533 aa11.63□□□□□ -0.55
PDGFC-207ENST00000511985 BACH1O14867 736 aa11.62□□□□□ -0.55
PDGFC-207ENST00000511985 ZBTB7BO15156 539 aaPredicted RBP11.62□□□□□ -0.55
PDGFC-207ENST00000511985 GSK3AP49840 483 aa11.62□□□□□ -0.55
PDGFC-207ENST00000511985 CLDN10P78369 228 aa11.62□□□□□ -0.55
PDGFC-207ENST00000511985 ABHD17AQ96GS6 310 aa11.62□□□□□ -0.55
PDGFC-207ENST00000511985 KCNMA1Q12791 1236 aa11.61□□□□□ -0.55
PDGFC-207ENST00000511985 TRIM50Q86XT4 487 aa11.61□□□□□ -0.55
PDGFC-207ENST00000511985 TPCN2Q8NHX9 752 aa11.61□□□□□ -0.55
PDGFC-207ENST00000511985 PHF24Q9UPV7 400 aa11.61□□□□□ -0.55
PDGFC-207ENST00000511985 BNIP3LO60238 219 aa11.6□□□□□ -0.55
PDGFC-207ENST00000511985 TBCELQ5QJ74 424 aa11.6□□□□□ -0.55
PDGFC-207ENST00000511985 TNS4Q8IZW8 715 aa11.6□□□□□ -0.55
PDGFC-207ENST00000511985 DNAAF2Q9NVR5 837 aaKnown RBP11.6□□□□□ -0.55
PDGFC-207ENST00000511985 SCHIP1Q9P0W5 487 aaPredicted RBP11.6□□□□□ -0.55
PDGFC-207ENST00000511985 EPHA4P54764 986 aa11.59□□□□□ -0.55
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