RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 TUBGCP6Q96RT7 1819 aa13.48□□□□□ -0.25
COPS4-211ENST00000511891 IL13P35225 146 aa13.48□□□□□ -0.25
COPS4-211ENST00000511891 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
COPS4-211ENST00000511891 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
COPS4-211ENST00000511891 MTHFSP49914 203 aa13.47□□□□□ -0.25
COPS4-211ENST00000511891 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
COPS4-211ENST00000511891 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
COPS4-211ENST00000511891 TMOD3Q9NYL9 352 aa13.47□□□□□ -0.25
COPS4-211ENST00000511891 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
COPS4-211ENST00000511891 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
COPS4-211ENST00000511891 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
COPS4-211ENST00000511891 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
COPS4-211ENST00000511891 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
COPS4-211ENST00000511891 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.25
COPS4-211ENST00000511891 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.25
COPS4-211ENST00000511891 ARXQ96QS3 562 aa13.46□□□□□ -0.25
COPS4-211ENST00000511891 QSER1Q2KHR3 1735 aa13.45□□□□□ -0.26
COPS4-211ENST00000511891 SMIM5Q71RC9 77 aa13.45□□□□□ -0.26
COPS4-211ENST00000511891 SLC16A10Q8TF71 515 aa13.45□□□□□ -0.26
COPS4-211ENST00000511891 SYT17Q9BSW7 474 aa13.45□□□□□ -0.26
COPS4-211ENST00000511891 C5P01031 1676 aa13.44□□□□□ -0.26
COPS4-211ENST00000511891 LOC102724428A0A0B4J2F2 783 aa13.44□□□□□ -0.26
COPS4-211ENST00000511891 SIK1P57059 783 aa13.44□□□□□ -0.26
COPS4-211ENST00000511891 LHX8Q68G74 356 aa13.44□□□□□ -0.26
COPS4-211ENST00000511891 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
COPS4-211ENST00000511891 ATG3Q9NT62 314 aa13.44□□□□□ -0.26
COPS4-211ENST00000511891 PLEKHG2Q9H7P9 1386 aa13.44□□□□□ -0.26
COPS4-211ENST00000511891 C19orf67A6NJJ6 358 aa13.43□□□□□ -0.26
COPS4-211ENST00000511891 KDM6AO15550 1401 aaPredicted RBP13.43□□□□□ -0.26
COPS4-211ENST00000511891 HMOX1P09601 288 aa13.43□□□□□ -0.26
COPS4-211ENST00000511891 POLD1P28340 1107 aa13.43□□□□□ -0.26
COPS4-211ENST00000511891 AMOTQ4VCS5 1084 aa13.43□□□□□ -0.26
COPS4-211ENST00000511891 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
COPS4-211ENST00000511891 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
COPS4-211ENST00000511891 LINC00116Q8NCU8 138 aa13.43□□□□□ -0.26
COPS4-211ENST00000511891 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
COPS4-211ENST00000511891 TAF1LQ8IZX4 1826 aa13.43□□□□□ -0.26
COPS4-211ENST00000511891 GABBR2O75899 941 aa13.42□□□□□ -0.26
COPS4-211ENST00000511891 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
COPS4-211ENST00000511891 ITPK1Q13572 414 aa13.42□□□□□ -0.26
COPS4-211ENST00000511891 AK7Q96M32 723 aa13.42□□□□□ -0.26
COPS4-211ENST00000511891 KDRP35968 1356 aa13.42□□□□□ -0.26
COPS4-211ENST00000511891 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
COPS4-211ENST00000511891 ERVV-2B6SEH9 535 aa13.41□□□□□ -0.26
COPS4-211ENST00000511891 PHF14O94880 888 aa13.41□□□□□ -0.26
COPS4-211ENST00000511891 ATP6V1AP38606 617 aa13.41□□□□□ -0.26
COPS4-211ENST00000511891 C1orf141Q5JVX7 400 aa13.41□□□□□ -0.26
COPS4-211ENST00000511891 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
COPS4-211ENST00000511891 CABP4P57796 275 aa13.4□□□□□ -0.26
COPS4-211ENST00000511891 SLC4A9Q96Q91 983 aa13.4□□□□□ -0.26
COPS4-211ENST00000511891 NPC1L1Q9UHC9 1359 aa13.4□□□□□ -0.26
COPS4-211ENST00000511891 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
COPS4-211ENST00000511891 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
COPS4-211ENST00000511891 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
COPS4-211ENST00000511891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.38□□□□□ -0.27
COPS4-211ENST00000511891 GNPATO15228 680 aa13.38□□□□□ -0.27
COPS4-211ENST00000511891 YY1P25490 414 aa13.38□□□□□ -0.27
COPS4-211ENST00000511891 FLAD1Q8NFF5 587 aa13.38□□□□□ -0.27
COPS4-211ENST00000511891 COL3A1P02461 1466 aaPredicted RBP13.37□□□□□ -0.27
COPS4-211ENST00000511891 HMGB2P26583 209 aaKnown RBP13.37□□□□□ -0.27
COPS4-211ENST00000511891 NFATC2IPQ8NCF5 419 aa13.37□□□□□ -0.27
COPS4-211ENST00000511891 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
COPS4-211ENST00000511891 LGR6Q9HBX8 967 aa13.37□□□□□ -0.27
COPS4-211ENST00000511891 UBR3Q6ZT12 1888 aa13.37□□□□□ -0.27
COPS4-211ENST00000511891 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
COPS4-211ENST00000511891 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
COPS4-211ENST00000511891 MTHFSDQ2M296 383 aaKnown RBP13.36□□□□□ -0.27
COPS4-211ENST00000511891 AKAP4Q5JQC9 854 aa13.36□□□□□ -0.27
COPS4-211ENST00000511891 SSFA2P28290 1259 aa13.35□□□□□ -0.27
COPS4-211ENST00000511891 RNMTO43148 476 aaKnown RBP13.34□□□□□ -0.27
COPS4-211ENST00000511891 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
COPS4-211ENST00000511891 SCN11AQ9UI33 1791 aa13.33□□□□□ -0.28
COPS4-211ENST00000511891 GPR162Q16538 588 aa13.33□□□□□ -0.28
COPS4-211ENST00000511891 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
COPS4-211ENST00000511891 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
COPS4-211ENST00000511891 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
COPS4-211ENST00000511891 RTCBQ9Y3I0 505 aaKnown RBP13.32□□□□□ -0.28
COPS4-211ENST00000511891 TRAPPC3LQ5T215 181 aa13.31□□□□□ -0.28
COPS4-211ENST00000511891 RC3H1Q5TC82 1133 aaKnown RBP13.31□□□□□ -0.28
COPS4-211ENST00000511891 CNTNAP4Q9C0A0 1308 aa13.31□□□□□ -0.28
COPS4-211ENST00000511891 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
COPS4-211ENST00000511891 RPS6KA4O75676 772 aa13.3□□□□□ -0.28
COPS4-211ENST00000511891 CRKLP46109 303 aaKnown RBP13.3□□□□□ -0.28
COPS4-211ENST00000511891 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
COPS4-211ENST00000511891 CFAP53Q96M91 514 aa13.3□□□□□ -0.28
COPS4-211ENST00000511891 ZNF831Q5JPB2 1677 aa13.3□□□□□ -0.28
COPS4-211ENST00000511891 MRC1P22897 1456 aa13.29□□□□□ -0.28
COPS4-211ENST00000511891 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
COPS4-211ENST00000511891 PRKAR2BP31323 418 aa13.29□□□□□ -0.28
COPS4-211ENST00000511891 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
COPS4-211ENST00000511891 DNAJC10Q8IXB1 793 aa13.29□□□□□ -0.28
COPS4-211ENST00000511891 PHACTR3Q96KR7 559 aa13.29□□□□□ -0.28
COPS4-211ENST00000511891 CD2APQ9Y5K6 639 aa13.29□□□□□ -0.28
COPS4-211ENST00000511891 MYH14Q7Z406 1995 aaKnown RBP13.29□□□□□ -0.28
COPS4-211ENST00000511891 TJP1Q07157 1748 aa13.28□□□□□ -0.28
COPS4-211ENST00000511891 ZBTB22O15209 634 aa13.28□□□□□ -0.28
COPS4-211ENST00000511891 MMP10P09238 476 aa13.28□□□□□ -0.28
COPS4-211ENST00000511891 RSPH6AQ9H0K4 717 aa13.28□□□□□ -0.28
COPS4-211ENST00000511891 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
COPS4-211ENST00000511891 VIRMAQ69YN4 1812 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms