RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 ARHGAP27Q6ZUM4 889 aa18.47■□□□□ 0.55
POLR2J3-216ENST00000511773 NMRK2Q9NPI5 230 aa18.46■□□□□ 0.55
POLR2J3-216ENST00000511773 DNAJC5GQ8N7S2 189 aa18.45■□□□□ 0.54
POLR2J3-216ENST00000511773 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
POLR2J3-216ENST00000511773 C10orf71Q711Q0 1435 aa18.45■□□□□ 0.54
POLR2J3-216ENST00000511773 WDR90Q96KV7 1748 aa18.45■□□□□ 0.54
POLR2J3-216ENST00000511773 ATG3Q9NT62 314 aa18.44■□□□□ 0.54
POLR2J3-216ENST00000511773 ANKRD26Q9UPS8 1709 aa18.43■□□□□ 0.54
POLR2J3-216ENST00000511773 TGFB2P61812 414 aa18.43■□□□□ 0.54
POLR2J3-216ENST00000511773 TRAPPC3LQ5T215 181 aa18.43■□□□□ 0.54
POLR2J3-216ENST00000511773 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
POLR2J3-216ENST00000511773 FCHSD2O94868 740 aa18.42■□□□□ 0.54
POLR2J3-216ENST00000511773 PHKG2P15735 406 aa18.42■□□□□ 0.54
POLR2J3-216ENST00000511773 DPEP1P16444 411 aa18.42■□□□□ 0.54
POLR2J3-216ENST00000511773 HTRA3P83110 453 aa18.42■□□□□ 0.54
POLR2J3-216ENST00000511773 C4AP0C0L4 1744 aa18.42■□□□□ 0.54
POLR2J3-216ENST00000511773 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
POLR2J3-216ENST00000511773 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
POLR2J3-216ENST00000511773 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
POLR2J3-216ENST00000511773 NLGN1Q8N2Q7 840 aa18.41■□□□□ 0.54
POLR2J3-216ENST00000511773 EYA1Q99502 592 aa18.41■□□□□ 0.54
POLR2J3-216ENST00000511773 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
POLR2J3-216ENST00000511773 CARD14Q9BXL6 1004 aa18.41■□□□□ 0.54
POLR2J3-216ENST00000511773 CCDC87Q9NVE4 849 aa18.41■□□□□ 0.54
POLR2J3-216ENST00000511773 KDRP35968 1356 aa18.41■□□□□ 0.54
POLR2J3-216ENST00000511773 C9orf131Q5VYM1 1079 aa18.39■□□□□ 0.53
POLR2J3-216ENST00000511773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.53
POLR2J3-216ENST00000511773 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.53
POLR2J3-216ENST00000511773 RBM46Q8TBY0 533 aaKnown RBP18.38■□□□□ 0.53
POLR2J3-216ENST00000511773 ARHGEF1Q92888 912 aaKnown RBP18.38■□□□□ 0.53
POLR2J3-216ENST00000511773 SLC4A9Q96Q91 983 aa18.38■□□□□ 0.53
POLR2J3-216ENST00000511773 PARP3Q9Y6F1 533 aa18.38■□□□□ 0.53
POLR2J3-216ENST00000511773 WASHC2AQ641Q2 1341 aa18.38■□□□□ 0.53
POLR2J3-216ENST00000511773 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
POLR2J3-216ENST00000511773 CAPN15O75808 1086 aa18.37■□□□□ 0.53
POLR2J3-216ENST00000511773 GYS1P13807 737 aa18.37■□□□□ 0.53
POLR2J3-216ENST00000511773 RFC4P35249 363 aa18.37■□□□□ 0.53
POLR2J3-216ENST00000511773 CDCA8Q53HL2 280 aa18.37■□□□□ 0.53
POLR2J3-216ENST00000511773 KCPQ6ZWJ8 1503 aa18.37■□□□□ 0.53
POLR2J3-216ENST00000511773 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
POLR2J3-216ENST00000511773 ZNF831Q5JPB2 1677 aa18.35■□□□□ 0.53
POLR2J3-216ENST00000511773 ADRA2BP18089 450 aa18.35■□□□□ 0.53
POLR2J3-216ENST00000511773 COL13A1Q5TAT6 717 aaPredicted RBP18.35■□□□□ 0.53
POLR2J3-216ENST00000511773 KLRG1Q96E93 195 aa18.35■□□□□ 0.53
POLR2J3-216ENST00000511773 CNTNAP4Q9C0A0 1308 aa18.34■□□□□ 0.53
POLR2J3-216ENST00000511773 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
POLR2J3-216ENST00000511773 KCNA3P22001 575 aa18.34■□□□□ 0.53
POLR2J3-216ENST00000511773 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
POLR2J3-216ENST00000511773 RPS6KA4O75676 772 aa18.33■□□□□ 0.52
POLR2J3-216ENST00000511773 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
POLR2J3-216ENST00000511773 EIF4A2Q14240 407 aaKnown RBP18.33■□□□□ 0.52
POLR2J3-216ENST00000511773 RC3H1Q5TC82 1133 aaKnown RBP18.33■□□□□ 0.52
POLR2J3-216ENST00000511773 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
POLR2J3-216ENST00000511773 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
POLR2J3-216ENST00000511773 FSTL1Q12841 308 aa18.32■□□□□ 0.52
POLR2J3-216ENST00000511773 DALRD3Q5D0E6 543 aaKnown RBP18.32■□□□□ 0.52
POLR2J3-216ENST00000511773 POLKQ9UBT6 870 aa18.32■□□□□ 0.52
POLR2J3-216ENST00000511773 PCNTO95613 3336 aa18.31■□□□□ 0.52
POLR2J3-216ENST00000511773 ERVV-2B6SEH9 535 aa18.31■□□□□ 0.52
POLR2J3-216ENST00000511773 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
POLR2J3-216ENST00000511773 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
POLR2J3-216ENST00000511773 SRP68Q9UHB9 627 aaKnown RBP18.31■□□□□ 0.52
POLR2J3-216ENST00000511773 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
POLR2J3-216ENST00000511773 KDM6AO15550 1401 aaPredicted RBP18.31■□□□□ 0.52
POLR2J3-216ENST00000511773 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
POLR2J3-216ENST00000511773 JMYQ8N9B5 988 aa18.3■□□□□ 0.52
POLR2J3-216ENST00000511773 CHRNA5P30532 468 aa18.29■□□□□ 0.52
POLR2J3-216ENST00000511773 CABP4P57796 275 aa18.29■□□□□ 0.52
POLR2J3-216ENST00000511773 DDR1Q08345 913 aa18.29■□□□□ 0.52
POLR2J3-216ENST00000511773 FKBP8Q14318 412 aa18.29■□□□□ 0.52
POLR2J3-216ENST00000511773 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
POLR2J3-216ENST00000511773 CRKLP46109 303 aaKnown RBP18.28■□□□□ 0.52
POLR2J3-216ENST00000511773 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
POLR2J3-216ENST00000511773 TNS4Q8IZW8 715 aa18.28■□□□□ 0.52
POLR2J3-216ENST00000511773 SBF1O95248 1867 aa18.28■□□□□ 0.52
POLR2J3-216ENST00000511773 USP42Q9H9J4 1324 aaKnown RBP18.27■□□□□ 0.52
POLR2J3-216ENST00000511773 RASSF7Q02833 373 aa18.26■□□□□ 0.51
POLR2J3-216ENST00000511773 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
POLR2J3-216ENST00000511773 POLR3GLQ9BT43 218 aa18.26■□□□□ 0.51
POLR2J3-216ENST00000511773 TJP1Q07157 1748 aa18.26■□□□□ 0.51
POLR2J3-216ENST00000511773 SMC1BQ8NDV3 1235 aa18.25■□□□□ 0.51
POLR2J3-216ENST00000511773 MTHFSP49914 203 aa18.24■□□□□ 0.51
POLR2J3-216ENST00000511773 C1orf141Q5JVX7 400 aa18.23■□□□□ 0.51
POLR2J3-216ENST00000511773 POLRMTO00411 1230 aaKnown RBP18.22■□□□□ 0.51
POLR2J3-216ENST00000511773 NFATC2IPQ8NCF5 419 aa18.22■□□□□ 0.51
POLR2J3-216ENST00000511773 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
POLR2J3-216ENST00000511773 AMOTQ4VCS5 1084 aa18.21■□□□□ 0.51
POLR2J3-216ENST00000511773 AEBP1Q8IUX7 1158 aa18.21■□□□□ 0.51
POLR2J3-216ENST00000511773 TIAM2Q8IVF5 1701 aa18.2■□□□□ 0.5
POLR2J3-216ENST00000511773 ZPR1O75312 459 aa18.2■□□□□ 0.5
POLR2J3-216ENST00000511773 PRELPP51888 382 aa18.2■□□□□ 0.5
POLR2J3-216ENST00000511773 USPL1Q5W0Q7 1092 aa18.2■□□□□ 0.5
POLR2J3-216ENST00000511773 INTS5Q6P9B9 1019 aaKnown RBP18.2■□□□□ 0.5
POLR2J3-216ENST00000511773 AFDNP55196 1824 aaKnown RBP18.19■□□□□ 0.5
POLR2J3-216ENST00000511773 HSPA1AP0DMV8 641 aaKnown RBP18.18■□□□□ 0.5
POLR2J3-216ENST00000511773 HSPA1BP0DMV9 641 aaKnown RBP18.18■□□□□ 0.5
POLR2J3-216ENST00000511773 TM4SF1P30408 202 aa18.18■□□□□ 0.5
POLR2J3-216ENST00000511773 SCN11AQ9UI33 1791 aa18.17■□□□□ 0.5
POLR2J3-216ENST00000511773 DLEC1Q9Y238 1755 aa18.17■□□□□ 0.5
POLR2J3-216ENST00000511773 LMNB1P20700 586 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms