RNA–Protein interactions for RNA: ENST00000511665.1

HMCES-208, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, human

TSL 5

Gene HMCES, Length 643 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMCES-208	ENST00000511665	MSL1	Q68DK7	614 aa		32.59	■■■□□ 2.81
HMCES-208	ENST00000511665	NPC1L1	Q9UHC9	1359 aa		32.58	■■■□□ 2.81
HMCES-208	ENST00000511665	TAF1L	Q8IZX4	1826 aa		32.58	■■■□□ 2.81
HMCES-208	ENST00000511665	ITPK1	Q13572	414 aa		32.58	■■■□□ 2.81
HMCES-208	ENST00000511665	HMOX1	P09601	288 aa		32.57	■■■□□ 2.8
HMCES-208	ENST00000511665	RBM42	Q9BTD8	480 aa	Known RBP	32.57	■■■□□ 2.8
HMCES-208	ENST00000511665	PHF14	O94880	888 aa		32.56	■■■□□ 2.8
HMCES-208	ENST00000511665	C4B	P0C0L5	1744 aa		32.56	■■■□□ 2.8
HMCES-208	ENST00000511665	KDM6A	O15550	1401 aa	Predicted RBP	32.55	■■■□□ 2.8
HMCES-208	ENST00000511665	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.55	■■■□□ 2.8
HMCES-208	ENST00000511665	SMIM5	Q71RC9	77 aa		32.55	■■■□□ 2.8
HMCES-208	ENST00000511665	AMIGO3	Q86WK7	504 aa		32.55	■■■□□ 2.8
HMCES-208	ENST00000511665	NFATC2IP	Q8NCF5	419 aa		32.54	■■■□□ 2.8
HMCES-208	ENST00000511665	COL24A1	Q17RW2	1714 aa		32.54	■■■□□ 2.8
HMCES-208	ENST00000511665	SSFA2	P28290	1259 aa		32.53	■■■□□ 2.8
HMCES-208	ENST00000511665	AKAP4	Q5JQC9	854 aa		32.53	■■■□□ 2.8
HMCES-208	ENST00000511665	GNPAT	O15228	680 aa		32.51	■■■□□ 2.79
HMCES-208	ENST00000511665	SLC4A9	Q96Q91	983 aa		32.51	■■■□□ 2.79
HMCES-208	ENST00000511665	GPR162	Q16538	588 aa		32.5	■■■□□ 2.79
HMCES-208	ENST00000511665	NLGN2	Q8NFZ4	835 aa		32.47	■■■□□ 2.79
HMCES-208	ENST00000511665	PTCD1	O75127	700 aa	Known RBP	32.46	■■■□□ 2.79
HMCES-208	ENST00000511665	LGR6	Q9HBX8	967 aa		32.46	■■■□□ 2.79
HMCES-208	ENST00000511665	U2SURP	O15042	1029 aa	Known RBP	32.45	■■■□□ 2.79
HMCES-208	ENST00000511665	MTHFSD	Q2M296	383 aa	Known RBP	32.45	■■■□□ 2.79
HMCES-208	ENST00000511665	RC3H1	Q5TC82	1133 aa	Known RBP	32.44	■■■□□ 2.78
HMCES-208	ENST00000511665	PELP1	Q8IZL8	1130 aa	Known RBP	32.44	■■■□□ 2.78
HMCES-208	ENST00000511665	RTCB	Q9Y3I0	505 aa	Known RBP	32.44	■■■□□ 2.78
HMCES-208	ENST00000511665	UBR3	Q6ZT12	1888 aa		32.44	■■■□□ 2.78
HMCES-208	ENST00000511665	TRAPPC3L	Q5T215	181 aa		32.43	■■■□□ 2.78
HMCES-208	ENST00000511665	RNMT	O43148	476 aa	Known RBP	32.42	■■■□□ 2.78
HMCES-208	ENST00000511665	SLC52A2	Q9HAB3	445 aa		32.41	■■■□□ 2.78
HMCES-208	ENST00000511665	UTRN	P46939	3433 aa		32.4	■■■□□ 2.78
HMCES-208	ENST00000511665	CD2AP	Q9Y5K6	639 aa		32.4	■■■□□ 2.78
HMCES-208	ENST00000511665	CFAP53	Q96M91	514 aa		32.39	■■■□□ 2.78
HMCES-208	ENST00000511665	CNTNAP4	Q9C0A0	1308 aa		32.38	■■■□□ 2.77
HMCES-208	ENST00000511665	RPS6KA4	O75676	772 aa		32.38	■■■□□ 2.77
HMCES-208	ENST00000511665	COL3A1	P02461	1466 aa	Predicted RBP	32.36	■■■□□ 2.77
HMCES-208	ENST00000511665	ARHGEF1	Q92888	912 aa	Known RBP	32.36	■■■□□ 2.77
HMCES-208	ENST00000511665	ADRA2B	P18089	450 aa		32.35	■■■□□ 2.77
HMCES-208	ENST00000511665	ZNF831	Q5JPB2	1677 aa		32.34	■■■□□ 2.77
HMCES-208	ENST00000511665	SCN11A	Q9UI33	1791 aa		32.34	■■■□□ 2.77
HMCES-208	ENST00000511665	PPP2R1A	P30153	589 aa		32.33	■■■□□ 2.77
HMCES-208	ENST00000511665	RFC4	P35249	363 aa		32.33	■■■□□ 2.77
HMCES-208	ENST00000511665	CRKL	P46109	303 aa	Known RBP	32.32	■■■□□ 2.76
HMCES-208	ENST00000511665	SLC39A6	Q13433	755 aa		32.32	■■■□□ 2.76
HMCES-208	ENST00000511665	NLGN1	Q8N2Q7	840 aa		32.32	■■■□□ 2.76
HMCES-208	ENST00000511665	NUDC	Q9Y266	331 aa		32.32	■■■□□ 2.76
HMCES-208	ENST00000511665	GAS2L2	Q8NHY3	880 aa		32.31	■■■□□ 2.76
HMCES-208	ENST00000511665	GRIN3B	O60391	1043 aa		32.3	■■■□□ 2.76
HMCES-208	ENST00000511665	MMP10	P09238	476 aa		32.29	■■■□□ 2.76
HMCES-208	ENST00000511665	GNAT3	A8MTJ3	354 aa		32.28	■■■□□ 2.76
HMCES-208	ENST00000511665	YBX3	P16989	372 aa	Known RBP eCLIP	32.28	■■■□□ 2.76
HMCES-208	ENST00000511665	DNAJC10	Q8IXB1	793 aa		32.27	■■■□□ 2.76
HMCES-208	ENST00000511665	GYS1	P13807	737 aa		32.26	■■■□□ 2.75
HMCES-208	ENST00000511665	COL5A3	P25940	1745 aa	Predicted RBP	32.26	■■■□□ 2.75
HMCES-208	ENST00000511665	PRKAR2B	P31323	418 aa		32.25	■■■□□ 2.75
HMCES-208	ENST00000511665	INTS5	Q6P9B9	1019 aa	Known RBP	32.25	■■■□□ 2.75
HMCES-208	ENST00000511665	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.25	■■■□□ 2.75
HMCES-208	ENST00000511665	IL17RE	Q8NFR9	667 aa		32.25	■■■□□ 2.75
HMCES-208	ENST00000511665	PHACTR3	Q96KR7	559 aa		32.24	■■■□□ 2.75
HMCES-208	ENST00000511665	RSPH6A	Q9H0K4	717 aa		32.24	■■■□□ 2.75
HMCES-208	ENST00000511665	MRC1	P22897	1456 aa		32.23	■■■□□ 2.75
HMCES-208	ENST00000511665	MYH14	Q7Z406	1995 aa	Known RBP	32.23	■■■□□ 2.75
HMCES-208	ENST00000511665	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.23	■■■□□ 2.75
HMCES-208	ENST00000511665	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.23	■■■□□ 2.75
HMCES-208	ENST00000511665	TEF	Q10587	303 aa		32.23	■■■□□ 2.75
HMCES-208	ENST00000511665	CHD4	Q14839	1912 aa		32.23	■■■□□ 2.75
HMCES-208	ENST00000511665	GOLGB1	Q14789	3259 aa	Known RBP	32.23	■■■□□ 2.75
HMCES-208	ENST00000511665	CCDC87	Q9NVE4	849 aa		32.22	■■■□□ 2.75
HMCES-208	ENST00000511665	CYP19A1	P11511	503 aa	Predicted RBP	32.2	■■■□□ 2.75
HMCES-208	ENST00000511665	TTC5	Q8N0Z6	440 aa		32.2	■■■□□ 2.75
HMCES-208	ENST00000511665	VSIG10	Q8N0Z9	540 aa		32.2	■■■□□ 2.75
HMCES-208	ENST00000511665	SRP68	Q9UHB9	627 aa	Known RBP	32.19	■■■□□ 2.74
HMCES-208	ENST00000511665	PARP3	Q9Y6F1	533 aa		32.19	■■■□□ 2.74
HMCES-208	ENST00000511665	FCHSD2	O94868	740 aa		32.18	■■■□□ 2.74
HMCES-208	ENST00000511665	ADAMTS7	Q9UKP4	1686 aa		32.18	■■■□□ 2.74
HMCES-208	ENST00000511665	TJP1	Q07157	1748 aa		32.17	■■■□□ 2.74
HMCES-208	ENST00000511665	WWC3	Q9ULE0	1092 aa		32.16	■■■□□ 2.74
HMCES-208	ENST00000511665	USP42	Q9H9J4	1324 aa	Known RBP	32.16	■■■□□ 2.74
HMCES-208	ENST00000511665	VIRMA	Q69YN4	1812 aa	Known RBP	32.15	■■■□□ 2.74
HMCES-208	ENST00000511665	ZPR1	O75312	459 aa		32.14	■■■□□ 2.74
HMCES-208	ENST00000511665	ZNF790	Q6PG37	636 aa		32.14	■■■□□ 2.74
HMCES-208	ENST00000511665	KCP	Q6ZWJ8	1503 aa		32.14	■■■□□ 2.74
HMCES-208	ENST00000511665	TGFB2	P61812	414 aa		32.13	■■■□□ 2.73
HMCES-208	ENST00000511665	FKBP8	Q14318	412 aa		32.13	■■■□□ 2.73
HMCES-208	ENST00000511665	CIC	Q96RK0	1608 aa	Predicted RBP	32.13	■■■□□ 2.73
HMCES-208	ENST00000511665	SOS1	Q07889	1333 aa	Predicted RBP	32.12	■■■□□ 2.73
HMCES-208	ENST00000511665	STARD3NL	O95772	234 aa		32.11	■■■□□ 2.73
HMCES-208	ENST00000511665	RTF1	Q92541	710 aa	Known RBP	32.11	■■■□□ 2.73
HMCES-208	ENST00000511665	ZNF496	Q96IT1	587 aa	Predicted RBP	32.11	■■■□□ 2.73
HMCES-208	ENST00000511665	ZBTB1	Q9Y2K1	713 aa		32.11	■■■□□ 2.73
HMCES-208	ENST00000511665	USPL1	Q5W0Q7	1092 aa		32.1	■■■□□ 2.73
HMCES-208	ENST00000511665	CEMIP	Q8WUJ3	1361 aa		32.09	■■■□□ 2.73
HMCES-208	ENST00000511665		A0A0G2JLW4	131 aa		32.09	■■■□□ 2.73
HMCES-208	ENST00000511665	BTBD11	A6QL63	1104 aa		32.09	■■■□□ 2.73
HMCES-208	ENST00000511665	CANX	P27824	592 aa	Known RBP	32.09	■■■□□ 2.73
HMCES-208	ENST00000511665	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.09	■■■□□ 2.73
HMCES-208	ENST00000511665	C4A	P0C0L4	1744 aa		32.07	■■■□□ 2.72
HMCES-208	ENST00000511665	NARF	Q9UHQ1	456 aa		32.07	■■■□□ 2.72
HMCES-208	ENST00000511665	TM4SF1	P30408	202 aa		32.06	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms