RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ZBTB47Q9UFB7 747 aaPredicted RBP3.69□□□□□ -1.82
CLOCK-209ENST00000511124 HDAC9Q9UKV0 1011 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 U2SURPO15042 1029 aaKnown RBP3.69□□□□□ -1.82
CLOCK-209ENST00000511124 PHF14O94880 888 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 KIF22Q14807 665 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 CCDC93Q567U6 631 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 TMOD2Q9NZR1 351 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 RNF181Q9P0P0 153 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 PTPRUQ92729 1446 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 ZEB1P37275 1124 aaPredicted RBP3.69□□□□□ -1.82
CLOCK-209ENST00000511124 VSIG10Q8N0Z9 540 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 L3MBTL2Q969R5 705 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 FMNL2Q96PY5 1086 aa3.69□□□□□ -1.82
CLOCK-209ENST00000511124 SBNO2Q9Y2G9 1366 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 DIAPH1O60610 1272 aaKnown RBP3.68□□□□□ -1.82
CLOCK-209ENST00000511124 LMNB1P20700 586 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 FXR2P51116 673 aaKnown RBP eCLIP3.68□□□□□ -1.82
CLOCK-209ENST00000511124 NEXNQ0ZGT2 675 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 NIM1KQ8IY84 436 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 ANKRD36BQ8N2N9 1353 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 RPS6KA4O75676 772 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 BICDL1Q6ZP65 573 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 RBM17Q96I25 401 aaKnown RBP3.68□□□□□ -1.82
CLOCK-209ENST00000511124 CWC22Q9HCG8 908 aaKnown RBP3.68□□□□□ -1.82
CLOCK-209ENST00000511124 ABT1Q9ULW3 272 aaKnown RBP3.68□□□□□ -1.82
CLOCK-209ENST00000511124 CLTCL1P53675 1640 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 RGL2O15211 777 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 MYO1BO43795 1136 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 NBPF6Q5VWK0 638 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 NBPF5PQ86XG9 351 aaPredicted RBP3.68□□□□□ -1.82
CLOCK-209ENST00000511124 NBPF4Q96M43 638 aa3.68□□□□□ -1.82
CLOCK-209ENST00000511124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.67□□□□□ -1.82
CLOCK-209ENST00000511124 LOC102724428A0A0B4J2F2 783 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 KCNJ4P48050 445 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 SIK1P57059 783 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 C2CD5Q86YS7 1000 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 NBPF15Q8N660 670 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 CNBD1Q8NA66 436 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 ZNF784Q8NCA9 323 aaPredicted RBP3.67□□□□□ -1.82
CLOCK-209ENST00000511124 ZNF526Q8TF50 670 aaPredicted RBP3.67□□□□□ -1.82
CLOCK-209ENST00000511124 TAOK3Q9H2K8 898 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 CPSF1Q10570 1443 aaKnown RBP3.67□□□□□ -1.82
CLOCK-209ENST00000511124 ITSN1Q15811 1721 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 ERBB3P21860 1342 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 BCL9LQ86UU0 1499 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 USP31Q70CQ4 1352 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 RGPD1P0DJD0 1748 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 PARP10Q53GL7 1025 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 TAF7LQ5H9L4 462 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 C2orf69Q8N8R5 385 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 STK31Q9BXU1 1019 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 IGSF1Q8N6C5 1336 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 PALLDQ8WX93 1383 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 TNS2Q63HR2 1409 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 LRP6O75581 1613 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 MMP10P09238 476 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 TTLL12Q14166 644 aaPredicted RBP3.67□□□□□ -1.82
CLOCK-209ENST00000511124 NOL10Q9BSC4 688 aaKnown RBP3.67□□□□□ -1.82
CLOCK-209ENST00000511124 VPS33BQ9H267 617 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 ABCC6O95255 1503 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 USP32Q8NFA0 1604 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 BCL9O00512 1426 aa3.67□□□□□ -1.82
CLOCK-209ENST00000511124 PXDNQ92626 1479 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 AKAP4Q5JQC9 854 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 DDX46Q7L014 1031 aaKnown RBP3.66□□□□□ -1.82
CLOCK-209ENST00000511124 CCAR1Q8IX12 1150 aaKnown RBP3.66□□□□□ -1.82
CLOCK-209ENST00000511124 OGFOD1Q8N543 542 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 HACL1Q9UJ83 578 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 WWC3Q9ULE0 1092 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 NWD2Q9ULI1 1742 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 MAP3K19Q56UN5 1328 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 SPATA31E1Q6ZUB1 1445 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 HTATSF1O43719 755 aaKnown RBP3.66□□□□□ -1.82
CLOCK-209ENST00000511124 HOXC9P31274 260 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 IFFO2Q5TF58 517 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 CHADLQ6NUI6 762 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 NLRP3Q96P20 1036 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 TMEM106CQ9BVX2 250 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 CHMP4BQ9H444 224 aaKnown RBP3.66□□□□□ -1.82
CLOCK-209ENST00000511124 SMC4Q9NTJ3 1288 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 QSER1Q2KHR3 1735 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 ERFEQ4G0M1 354 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 CCDC102AQ96A19 550 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 DCPSQ96C86 337 aaKnown RBP3.66□□□□□ -1.82
CLOCK-209ENST00000511124 PCDH10Q9P2E7 1040 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 INSRP06213 1382 aa3.66□□□□□ -1.82
CLOCK-209ENST00000511124 XRN1Q8IZH2 1706 aaKnown RBP3.66□□□□□ -1.82
CLOCK-209ENST00000511124 E9PCH4 1651 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 NBPF1Q3BBV0 1214 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 EAPPQ56P03 285 aaPredicted RBP3.65□□□□□ -1.82
CLOCK-209ENST00000511124 LARGE2Q8N3Y3 721 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 CREBZFQ9NS37 354 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 ALDH1A1P00352 501 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 NPR1P16066 1061 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 HOXD10P28358 340 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 TNNT2P45379 298 aaPredicted RBP3.65□□□□□ -1.82
CLOCK-209ENST00000511124 C9orf131Q5VYM1 1079 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 LDHDQ86WU2 507 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 NGEFQ8N5V2 710 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 MASTLQ96GX5 879 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms