RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 DCAF5Q96JK2 942 aa11.43□□□□□ -0.58
TRIO-217ENST00000511019 RBM42Q9BTD8 480 aaKnown RBP11.43□□□□□ -0.58
TRIO-217ENST00000511019 CHD4Q14839 1912 aa11.43□□□□□ -0.58
TRIO-217ENST00000511019 CABP4P57796 275 aa11.42□□□□□ -0.58
TRIO-217ENST00000511019 AMOTQ4VCS5 1084 aa11.42□□□□□ -0.58
TRIO-217ENST00000511019 RTCBQ9Y3I0 505 aaKnown RBP11.42□□□□□ -0.58
TRIO-217ENST00000511019 C5P01031 1676 aa11.41□□□□□ -0.58
TRIO-217ENST00000511019 MTHFSP49914 203 aa11.41□□□□□ -0.58
TRIO-217ENST00000511019 NLGN1Q8N2Q7 840 aa11.41□□□□□ -0.58
TRIO-217ENST00000511019 TUBGCP6Q96RT7 1819 aa11.41□□□□□ -0.58
TRIO-217ENST00000511019 IGSF1Q8N6C5 1336 aa11.4□□□□□ -0.58
TRIO-217ENST00000511019 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
TRIO-217ENST00000511019 CCER1Q8TC90 406 aaPredicted RBP11.4□□□□□ -0.58
TRIO-217ENST00000511019 GPBP1L1Q9HC44 474 aaPredicted RBP11.4□□□□□ -0.58
TRIO-217ENST00000511019 WWC3Q9ULE0 1092 aa11.4□□□□□ -0.58
TRIO-217ENST00000511019 C4BP0C0L5 1744 aa11.4□□□□□ -0.58
TRIO-217ENST00000511019 MMP10P09238 476 aa11.39□□□□□ -0.59
TRIO-217ENST00000511019 RFC4P35249 363 aa11.39□□□□□ -0.59
TRIO-217ENST00000511019 C1orf141Q5JVX7 400 aa11.39□□□□□ -0.59
TRIO-217ENST00000511019 ZNF530Q6P9A1 599 aaPredicted RBP11.39□□□□□ -0.59
TRIO-217ENST00000511019 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
TRIO-217ENST00000511019 KNSTRNQ9Y448 316 aa11.39□□□□□ -0.59
TRIO-217ENST00000511019 PLEKHG2Q9H7P9 1386 aa11.39□□□□□ -0.59
TRIO-217ENST00000511019 PKD1L3Q7Z443 1732 aa11.38□□□□□ -0.59
TRIO-217ENST00000511019 MAP2P11137 1827 aaKnown RBP11.38□□□□□ -0.59
TRIO-217ENST00000511019 ITGB4P16144 1822 aa11.38□□□□□ -0.59
TRIO-217ENST00000511019 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
TRIO-217ENST00000511019 TGFB2P61812 414 aa11.38□□□□□ -0.59
TRIO-217ENST00000511019 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
TRIO-217ENST00000511019 NFATC2IPQ8NCF5 419 aa11.38□□□□□ -0.59
TRIO-217ENST00000511019 CNKSR2Q8WXI2 1034 aa11.38□□□□□ -0.59
TRIO-217ENST00000511019 SLC4A9Q96Q91 983 aa11.38□□□□□ -0.59
TRIO-217ENST00000511019 ATP10DQ9P241 1426 aa11.37□□□□□ -0.59
TRIO-217ENST00000511019 PTCD1O75127 700 aaKnown RBP11.37□□□□□ -0.59
TRIO-217ENST00000511019 ZNF526Q8TF50 670 aaPredicted RBP11.37□□□□□ -0.59
TRIO-217ENST00000511019 TOGARAM1Q9Y4F4 1720 aa11.37□□□□□ -0.59
TRIO-217ENST00000511019 A0A0G2JLW4 131 aa11.36□□□□□ -0.59
TRIO-217ENST00000511019 AEBP1Q8IUX7 1158 aa11.36□□□□□ -0.59
TRIO-217ENST00000511019 CCDC87Q9NVE4 849 aa11.36□□□□□ -0.59
TRIO-217ENST00000511019 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
TRIO-217ENST00000511019 TAF1LQ8IZX4 1826 aa11.36□□□□□ -0.59
TRIO-217ENST00000511019 CNTNAP4Q9C0A0 1308 aa11.35□□□□□ -0.59
TRIO-217ENST00000511019 GYS1P13807 737 aa11.35□□□□□ -0.59
TRIO-217ENST00000511019 IL13P35225 146 aa11.35□□□□□ -0.59
TRIO-217ENST00000511019 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
TRIO-217ENST00000511019 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
TRIO-217ENST00000511019 ARHGAP27Q6ZUM4 889 aa11.34□□□□□ -0.59
TRIO-217ENST00000511019 KDRP35968 1356 aa11.33□□□□□ -0.6
TRIO-217ENST00000511019 DPEP1P16444 411 aa11.33□□□□□ -0.6
TRIO-217ENST00000511019 AKAP4Q5JQC9 854 aa11.33□□□□□ -0.6
TRIO-217ENST00000511019 UBR3Q6ZT12 1888 aa11.33□□□□□ -0.6
TRIO-217ENST00000511019 FCHSD2O94868 740 aa11.32□□□□□ -0.6
TRIO-217ENST00000511019 CRKLP46109 303 aaKnown RBP11.32□□□□□ -0.6
TRIO-217ENST00000511019 KDM6AO15550 1401 aaPredicted RBP11.32□□□□□ -0.6
TRIO-217ENST00000511019 ADCY9O60503 1353 aa11.31□□□□□ -0.6
TRIO-217ENST00000511019 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
TRIO-217ENST00000511019 INTS5Q6P9B9 1019 aaKnown RBP11.31□□□□□ -0.6
TRIO-217ENST00000511019 LGR6Q9HBX8 967 aa11.31□□□□□ -0.6
TRIO-217ENST00000511019 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
TRIO-217ENST00000511019 SRP68Q9UHB9 627 aaKnown RBP11.31□□□□□ -0.6
TRIO-217ENST00000511019 UTRNP46939 3433 aa11.31□□□□□ -0.6
TRIO-217ENST00000511019 ZPR1O75312 459 aa11.3□□□□□ -0.6
TRIO-217ENST00000511019 HMOX1P09601 288 aa11.3□□□□□ -0.6
TRIO-217ENST00000511019 HSPA6P17066 643 aa11.3□□□□□ -0.6
TRIO-217ENST00000511019 FKBP8Q14318 412 aa11.3□□□□□ -0.6
TRIO-217ENST00000511019 SLC52A2Q9HAB3 445 aa11.3□□□□□ -0.6
TRIO-217ENST00000511019 KIF3CO14782 793 aa11.29□□□□□ -0.6
TRIO-217ENST00000511019 RNMTO43148 476 aaKnown RBP11.29□□□□□ -0.6
TRIO-217ENST00000511019 DIAPH1O60610 1272 aaKnown RBP11.29□□□□□ -0.6
TRIO-217ENST00000511019 KCNA3P22001 575 aa11.29□□□□□ -0.6
TRIO-217ENST00000511019 DNAJC10Q8IXB1 793 aa11.29□□□□□ -0.6
TRIO-217ENST00000511019 PXDNLA1KZ92 1463 aa11.29□□□□□ -0.6
TRIO-217ENST00000511019 PER1O15534 1290 aaPredicted RBP11.28□□□□□ -0.6
TRIO-217ENST00000511019 TM4SF1P30408 202 aa11.28□□□□□ -0.6
TRIO-217ENST00000511019 SLC39A6Q13433 755 aa11.28□□□□□ -0.6
TRIO-217ENST00000511019 MTHFSDQ2M296 383 aaKnown RBP11.28□□□□□ -0.6
TRIO-217ENST00000511019 DALRD3Q5D0E6 543 aaKnown RBP11.28□□□□□ -0.6
TRIO-217ENST00000511019 CC2D1BQ5T0F9 858 aaKnown RBP11.28□□□□□ -0.6
TRIO-217ENST00000511019 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
TRIO-217ENST00000511019 USP42Q9H9J4 1324 aaKnown RBP11.28□□□□□ -0.6
TRIO-217ENST00000511019 TOMM70O94826 608 aa11.27□□□□□ -0.61
TRIO-217ENST00000511019 CYP19A1P11511 503 aaPredicted RBP11.27□□□□□ -0.61
TRIO-217ENST00000511019 USPL1Q5W0Q7 1092 aa11.27□□□□□ -0.61
TRIO-217ENST00000511019 CICQ96RK0 1608 aaPredicted RBP11.27□□□□□ -0.61
TRIO-217ENST00000511019 ZNF831Q5JPB2 1677 aa11.27□□□□□ -0.61
TRIO-217ENST00000511019 C10orf71Q711Q0 1435 aa11.26□□□□□ -0.61
TRIO-217ENST00000511019 DDR1Q08345 913 aa11.26□□□□□ -0.61
TRIO-217ENST00000511019 CNGB1Q14028 1251 aaPredicted RBP11.26□□□□□ -0.61
TRIO-217ENST00000511019 C9orf131Q5VYM1 1079 aa11.26□□□□□ -0.61
TRIO-217ENST00000511019 POLRMTO00411 1230 aaKnown RBP11.25□□□□□ -0.61
TRIO-217ENST00000511019 CHRNA5P30532 468 aa11.25□□□□□ -0.61
TRIO-217ENST00000511019 VSIG10Q8N0Z9 540 aa11.25□□□□□ -0.61
TRIO-217ENST00000511019 NARFQ9UHQ1 456 aa11.25□□□□□ -0.61
TRIO-217ENST00000511019 U2SURPO15042 1029 aaKnown RBP11.24□□□□□ -0.61
TRIO-217ENST00000511019 STARD3NLO95772 234 aa11.24□□□□□ -0.61
TRIO-217ENST00000511019 CANXP27824 592 aaKnown RBP11.24□□□□□ -0.61
TRIO-217ENST00000511019 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
TRIO-217ENST00000511019 TTC5Q8N0Z6 440 aa11.24□□□□□ -0.61
TRIO-217ENST00000511019 SOS1Q07889 1333 aaPredicted RBP11.24□□□□□ -0.61
TRIO-217ENST00000511019 C4AP0C0L4 1744 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms