RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 PDE1AP54750 535 aa17.51■□□□□ 0.39
AP003555.1-202ENST00000511013 ATP8B2P98198 1209 aa17.51■□□□□ 0.39
AP003555.1-202ENST00000511013 FKBP5Q13451 457 aaPredicted RBP17.51■□□□□ 0.39
AP003555.1-202ENST00000511013 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
AP003555.1-202ENST00000511013 NWD1Q149M9 1564 aa17.51■□□□□ 0.39
AP003555.1-202ENST00000511013 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
AP003555.1-202ENST00000511013 ST18O60284 1047 aa17.5■□□□□ 0.39
AP003555.1-202ENST00000511013 XRCC6P12956 609 aaKnown RBP eCLIP17.5■□□□□ 0.39
AP003555.1-202ENST00000511013 NUCB2P80303 420 aa17.5■□□□□ 0.39
AP003555.1-202ENST00000511013 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
AP003555.1-202ENST00000511013 LRRCC1Q9C099 1032 aa17.5■□□□□ 0.39
AP003555.1-202ENST00000511013 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
AP003555.1-202ENST00000511013 CWC22Q9HCG8 908 aaKnown RBP17.49■□□□□ 0.39
AP003555.1-202ENST00000511013 SRCIN1Q9C0H9 1055 aa17.48■□□□□ 0.39
AP003555.1-202ENST00000511013 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
AP003555.1-202ENST00000511013 NUTM2GQ5VZR2 741 aa17.48■□□□□ 0.39
AP003555.1-202ENST00000511013 PHF8Q9UPP1 1060 aa17.48■□□□□ 0.39
AP003555.1-202ENST00000511013 IP6K1Q92551 441 aa17.47■□□□□ 0.39
AP003555.1-202ENST00000511013 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
AP003555.1-202ENST00000511013 EXOC6BQ9Y2D4 811 aa17.45■□□□□ 0.38
AP003555.1-202ENST00000511013 CHD2O14647 1828 aaKnown RBP17.45■□□□□ 0.38
AP003555.1-202ENST00000511013 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
AP003555.1-202ENST00000511013 LTN1O94822 1766 aa17.45■□□□□ 0.38
AP003555.1-202ENST00000511013 SSFA2P28290 1259 aa17.45■□□□□ 0.38
AP003555.1-202ENST00000511013 C14orf37Q86TY3 774 aa17.45■□□□□ 0.38
AP003555.1-202ENST00000511013 STAP2Q9UGK3 403 aa17.45■□□□□ 0.38
AP003555.1-202ENST00000511013 AOX1Q06278 1338 aa17.45■□□□□ 0.38
AP003555.1-202ENST00000511013 SALL3Q9BXA9 1300 aa17.45■□□□□ 0.38
AP003555.1-202ENST00000511013 HOXB7P09629 217 aa17.44■□□□□ 0.38
AP003555.1-202ENST00000511013 UBTFL1P0CB47 393 aaPredicted RBP17.44■□□□□ 0.38
AP003555.1-202ENST00000511013 MX1P20591 662 aa17.44■□□□□ 0.38
AP003555.1-202ENST00000511013 MCCP23508 829 aa17.44■□□□□ 0.38
AP003555.1-202ENST00000511013 HDGFL1Q5TGJ6 251 aa17.44■□□□□ 0.38
AP003555.1-202ENST00000511013 ANKLE2Q86XL3 938 aa17.43■□□□□ 0.38
AP003555.1-202ENST00000511013 KCNH5Q8NCM2 988 aa17.43■□□□□ 0.38
AP003555.1-202ENST00000511013 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
AP003555.1-202ENST00000511013 GRPEL1Q9HAV7 217 aa17.43■□□□□ 0.38
AP003555.1-202ENST00000511013 TUBGCP6Q96RT7 1819 aa17.43■□□□□ 0.38
AP003555.1-202ENST00000511013 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
AP003555.1-202ENST00000511013 BAG4O95429 457 aaKnown RBP17.43■□□□□ 0.38
AP003555.1-202ENST00000511013 MCM2P49736 904 aa17.43■□□□□ 0.38
AP003555.1-202ENST00000511013 LRRFIP2Q9Y608 721 aaKnown RBP17.43■□□□□ 0.38
AP003555.1-202ENST00000511013 CEMIPQ8WUJ3 1361 aa17.42■□□□□ 0.38
AP003555.1-202ENST00000511013 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
AP003555.1-202ENST00000511013 ESYT1Q9BSJ8 1104 aa17.42■□□□□ 0.38
AP003555.1-202ENST00000511013 USP44Q9H0E7 712 aa17.42■□□□□ 0.38
AP003555.1-202ENST00000511013 EPB41L2O43491 1005 aaKnown RBP17.4■□□□□ 0.38
AP003555.1-202ENST00000511013 ANAPC15P60006 121 aa17.4■□□□□ 0.38
AP003555.1-202ENST00000511013 SSH3Q8TE77 659 aa17.4■□□□□ 0.38
AP003555.1-202ENST00000511013 ARXQ96QS3 562 aa17.4■□□□□ 0.38
AP003555.1-202ENST00000511013 ADGRL3Q9HAR2 1447 aa17.4■□□□□ 0.38
AP003555.1-202ENST00000511013 NFAT5O94916 1531 aa17.4■□□□□ 0.38
AP003555.1-202ENST00000511013 CYP2E1P05181 493 aaPredicted RBP17.4■□□□□ 0.38
AP003555.1-202ENST00000511013 PSME1Q06323 249 aa17.4■□□□□ 0.38
AP003555.1-202ENST00000511013 KLHL40Q2TBA0 621 aa17.4■□□□□ 0.38
AP003555.1-202ENST00000511013 AK9Q5TCS8 1911 aa17.39■□□□□ 0.38
AP003555.1-202ENST00000511013 PLEKHO1Q53GL0 409 aaPredicted RBP17.39■□□□□ 0.37
AP003555.1-202ENST00000511013 USHBP1Q8N6Y0 703 aa17.39■□□□□ 0.37
AP003555.1-202ENST00000511013 PHRF1Q9P1Y6 1649 aaKnown RBP17.39■□□□□ 0.37
AP003555.1-202ENST00000511013 MED1Q15648 1581 aaPredicted RBP17.39■□□□□ 0.37
AP003555.1-202ENST00000511013 CHMLP26374 656 aa17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 TRIM6-TRIM34B2RNG4 842 aa17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 NBPF6Q5VWK0 638 aa17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 RILPL2Q969X0 211 aa17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 NBPF4Q96M43 638 aa17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 DDX49Q9Y6V7 483 aaKnown RBP17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
AP003555.1-202ENST00000511013 TEFQ10587 303 aa17.37■□□□□ 0.37
AP003555.1-202ENST00000511013 POLA2Q14181 598 aa17.37■□□□□ 0.37
AP003555.1-202ENST00000511013 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
AP003555.1-202ENST00000511013 PANK2Q9BZ23 570 aa17.37■□□□□ 0.37
AP003555.1-202ENST00000511013 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
AP003555.1-202ENST00000511013 LMO7Q8WWI1 1683 aa17.37■□□□□ 0.37
AP003555.1-202ENST00000511013 HSP90AB4PQ58FF6 505 aa17.36■□□□□ 0.37
AP003555.1-202ENST00000511013 NEK4P51957 841 aa17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 ESCO1Q5FWF5 840 aa17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 IL17RAQ96F46 866 aa17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 MCTP1Q6DN14 999 aa17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 ZNF530Q6P9A1 599 aaPredicted RBP17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 PPP1R42Q7Z4L9 355 aa17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
AP003555.1-202ENST00000511013 ZNF142P52746 1687 aaPredicted RBP17.34■□□□□ 0.37
AP003555.1-202ENST00000511013 SURF6O75683 361 aaKnown RBP17.34■□□□□ 0.37
AP003555.1-202ENST00000511013 TSHZ3Q63HK5 1081 aa17.34■□□□□ 0.37
AP003555.1-202ENST00000511013 KIF1BPQ96EK5 621 aa17.34■□□□□ 0.37
AP003555.1-202ENST00000511013 LGR6Q9HBX8 967 aa17.34■□□□□ 0.37
AP003555.1-202ENST00000511013 OVOS2A0A0G2JMS6 1433 aa17.33■□□□□ 0.37
AP003555.1-202ENST00000511013 ANO2Q9NQ90 1003 aa17.33■□□□□ 0.37
AP003555.1-202ENST00000511013 BTBD11A6QL63 1104 aa17.33■□□□□ 0.36
AP003555.1-202ENST00000511013 BEND3Q5T5X7 828 aa17.33■□□□□ 0.36
AP003555.1-202ENST00000511013 RHPN1Q8TCX5 695 aa17.33■□□□□ 0.36
AP003555.1-202ENST00000511013 TMX3Q96JJ7 454 aa17.33■□□□□ 0.36
AP003555.1-202ENST00000511013 CHPF2Q9P2E5 772 aa17.33■□□□□ 0.36
AP003555.1-202ENST00000511013 CUL4AQ13619 759 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms