RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 GPBP1L1Q9HC44 474 aaPredicted RBP20.56■□□□□ 0.88
COL1A1-212ENST00000510710 WWC3Q9ULE0 1092 aa20.56■□□□□ 0.88
COL1A1-212ENST00000510710 ATG3Q9NT62 314 aa20.55■□□□□ 0.88
COL1A1-212ENST00000510710 ZNF526Q8TF50 670 aaPredicted RBP20.52■□□□□ 0.88
COL1A1-212ENST00000510710 TRAPPC3LQ5T215 181 aa20.51■□□□□ 0.87
COL1A1-212ENST00000510710 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
COL1A1-212ENST00000510710 HSP90AB1P08238 724 aaKnown RBP20.5■□□□□ 0.87
COL1A1-212ENST00000510710 MMP10P09238 476 aa20.5■□□□□ 0.87
COL1A1-212ENST00000510710 RBM42Q9BTD8 480 aaKnown RBP20.5■□□□□ 0.87
COL1A1-212ENST00000510710 RTCBQ9Y3I0 505 aaKnown RBP20.5■□□□□ 0.87
COL1A1-212ENST00000510710 PLEKHO1Q53GL0 409 aaPredicted RBP20.49■□□□□ 0.87
COL1A1-212ENST00000510710 DCAF5Q96JK2 942 aa20.49■□□□□ 0.87
COL1A1-212ENST00000510710 PLEKHG2Q9H7P9 1386 aa20.48■□□□□ 0.87
COL1A1-212ENST00000510710 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
COL1A1-212ENST00000510710 PANK3Q9H999 370 aa20.48■□□□□ 0.87
COL1A1-212ENST00000510710 ADCY9O60503 1353 aa20.47■□□□□ 0.87
COL1A1-212ENST00000510710 CABP4P57796 275 aa20.46■□□□□ 0.87
COL1A1-212ENST00000510710 EIF4G2P78344 907 aaKnown RBP eCLIP20.46■□□□□ 0.87
COL1A1-212ENST00000510710 AMOTQ4VCS5 1084 aa20.46■□□□□ 0.87
COL1A1-212ENST00000510710 NLGN1Q8N2Q7 840 aa20.46■□□□□ 0.87
COL1A1-212ENST00000510710 SLC4A9Q96Q91 983 aa20.46■□□□□ 0.87
COL1A1-212ENST00000510710 KDRP35968 1356 aa20.46■□□□□ 0.87
COL1A1-212ENST00000510710 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
COL1A1-212ENST00000510710 ZNF530Q6P9A1 599 aaPredicted RBP20.45■□□□□ 0.86
COL1A1-212ENST00000510710 ARHGEF1Q92888 912 aaKnown RBP20.45■□□□□ 0.86
COL1A1-212ENST00000510710 ADRA2BP18089 450 aa20.44■□□□□ 0.86
COL1A1-212ENST00000510710 RFC4P35249 363 aa20.44■□□□□ 0.86
COL1A1-212ENST00000510710 TGFB2P61812 414 aa20.44■□□□□ 0.86
COL1A1-212ENST00000510710 HSPA5P11021 654 aaKnown RBP20.43■□□□□ 0.86
COL1A1-212ENST00000510710 MTHFSP49914 203 aa20.43■□□□□ 0.86
COL1A1-212ENST00000510710 A0A0G2JLW4 131 aa20.42■□□□□ 0.86
COL1A1-212ENST00000510710 RPS6KA4O75676 772 aa20.42■□□□□ 0.86
COL1A1-212ENST00000510710 C1orf141Q5JVX7 400 aa20.42■□□□□ 0.86
COL1A1-212ENST00000510710 MORC1Q86VD1 984 aa20.42■□□□□ 0.86
COL1A1-212ENST00000510710 CCDC87Q9NVE4 849 aa20.42■□□□□ 0.86
COL1A1-212ENST00000510710 BCS1LQ9Y276 419 aa20.42■□□□□ 0.86
COL1A1-212ENST00000510710 CNTNAP4Q9C0A0 1308 aa20.42■□□□□ 0.86
COL1A1-212ENST00000510710 HSPA6P17066 643 aa20.41■□□□□ 0.86
COL1A1-212ENST00000510710 PARP3Q9Y6F1 533 aa20.41■□□□□ 0.86
COL1A1-212ENST00000510710 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
COL1A1-212ENST00000510710 PXDNLA1KZ92 1463 aa20.4■□□□□ 0.86
COL1A1-212ENST00000510710 KDM6AO15550 1401 aaPredicted RBP20.4■□□□□ 0.86
COL1A1-212ENST00000510710 PTCD1O75127 700 aaKnown RBP20.4■□□□□ 0.86
COL1A1-212ENST00000510710 GYS1P13807 737 aa20.4■□□□□ 0.86
COL1A1-212ENST00000510710 ZNF831Q5JPB2 1677 aa20.4■□□□□ 0.86
COL1A1-212ENST00000510710 AEBP1Q8IUX7 1158 aa20.4■□□□□ 0.86
COL1A1-212ENST00000510710 KIF13BQ9NQT8 1826 aa20.39■□□□□ 0.86
COL1A1-212ENST00000510710 N4BP2Q86UW6 1770 aaPredicted RBP20.39■□□□□ 0.86
COL1A1-212ENST00000510710 NFATC2IPQ8NCF5 419 aa20.39■□□□□ 0.85
COL1A1-212ENST00000510710 DPEP1P16444 411 aa20.38■□□□□ 0.85
COL1A1-212ENST00000510710 SULT6B1Q6IMI4 303 aa20.38■□□□□ 0.85
COL1A1-212ENST00000510710 ARHGAP27Q6ZUM4 889 aa20.38■□□□□ 0.85
COL1A1-212ENST00000510710 COL5A3P25940 1745 aaPredicted RBP20.38■□□□□ 0.85
COL1A1-212ENST00000510710 KIF3CO14782 793 aa20.37■□□□□ 0.85
COL1A1-212ENST00000510710 KNSTRNQ9Y448 316 aa20.37■□□□□ 0.85
COL1A1-212ENST00000510710 C10orf71Q711Q0 1435 aa20.36■□□□□ 0.85
COL1A1-212ENST00000510710 FCHSD2O94868 740 aa20.36■□□□□ 0.85
COL1A1-212ENST00000510710 CRKLP46109 303 aaKnown RBP20.36■□□□□ 0.85
COL1A1-212ENST00000510710 C4AP0C0L4 1744 aa20.36■□□□□ 0.85
COL1A1-212ENST00000510710 KIAA1551Q9HCM1 1747 aa20.35■□□□□ 0.85
COL1A1-212ENST00000510710 MYH14Q7Z406 1995 aaKnown RBP20.34■□□□□ 0.85
COL1A1-212ENST00000510710 IFFO2Q5TF58 517 aa20.34■□□□□ 0.85
COL1A1-212ENST00000510710 IL13P35225 146 aa20.33■□□□□ 0.85
COL1A1-212ENST00000510710 SRP68Q9UHB9 627 aaKnown RBP20.33■□□□□ 0.85
COL1A1-212ENST00000510710 PIM2Q9P1W9 311 aa20.32■□□□□ 0.84
COL1A1-212ENST00000510710 FKBP8Q14318 412 aa20.31■□□□□ 0.84
COL1A1-212ENST00000510710 KCNA3P22001 575 aa20.3■□□□□ 0.84
COL1A1-212ENST00000510710 AKAP4Q5JQC9 854 aa20.3■□□□□ 0.84
COL1A1-212ENST00000510710 USP42Q9H9J4 1324 aaKnown RBP20.29■□□□□ 0.84
COL1A1-212ENST00000510710 TOMM70O94826 608 aa20.29■□□□□ 0.84
COL1A1-212ENST00000510710 ZPR1O75312 459 aa20.28■□□□□ 0.84
COL1A1-212ENST00000510710 DALRD3Q5D0E6 543 aaKnown RBP20.28■□□□□ 0.84
COL1A1-212ENST00000510710 INTS5Q6P9B9 1019 aaKnown RBP20.28■□□□□ 0.84
COL1A1-212ENST00000510710 CEP350Q5VT06 3117 aa20.28■□□□□ 0.84
COL1A1-212ENST00000510710 BRCA1P38398 1863 aaKnown RBP20.27■□□□□ 0.84
COL1A1-212ENST00000510710 SCN11AQ9UI33 1791 aa20.27■□□□□ 0.84
COL1A1-212ENST00000510710 APLP1P51693 650 aa20.27■□□□□ 0.84
COL1A1-212ENST00000510710 DDR1Q08345 913 aa20.27■□□□□ 0.84
COL1A1-212ENST00000510710 C9orf131Q5VYM1 1079 aa20.27■□□□□ 0.84
COL1A1-212ENST00000510710 DNAJC10Q8IXB1 793 aa20.27■□□□□ 0.84
COL1A1-212ENST00000510710 SLC52A2Q9HAB3 445 aa20.27■□□□□ 0.84
COL1A1-212ENST00000510710 LGR6Q9HBX8 967 aa20.27■□□□□ 0.84
COL1A1-212ENST00000510710 TJP1Q07157 1748 aa20.27■□□□□ 0.83
COL1A1-212ENST00000510710 NMRK2Q9NPI5 230 aa20.26■□□□□ 0.83
COL1A1-212ENST00000510710 RNMTO43148 476 aaKnown RBP20.25■□□□□ 0.83
COL1A1-212ENST00000510710 HMOX1P09601 288 aa20.25■□□□□ 0.83
COL1A1-212ENST00000510710 AMER1Q5JTC6 1135 aaPredicted RBP20.25■□□□□ 0.83
COL1A1-212ENST00000510710 POLRMTO00411 1230 aaKnown RBP20.24■□□□□ 0.83
COL1A1-212ENST00000510710 TM4SF1P30408 202 aa20.24■□□□□ 0.83
COL1A1-212ENST00000510710 CHRNA5P30532 468 aa20.24■□□□□ 0.83
COL1A1-212ENST00000510710 SLC39A6Q13433 755 aa20.24■□□□□ 0.83
COL1A1-212ENST00000510710 USPL1Q5W0Q7 1092 aa20.24■□□□□ 0.83
COL1A1-212ENST00000510710 ARFGEF1Q9Y6D6 1849 aa20.24■□□□□ 0.83
COL1A1-212ENST00000510710 C16orf71Q8IYS4 520 aaPredicted RBP20.23■□□□□ 0.83
COL1A1-212ENST00000510710 CYP19A1P11511 503 aaPredicted RBP20.22■□□□□ 0.83
COL1A1-212ENST00000510710 SOS1Q07889 1333 aaPredicted RBP20.22■□□□□ 0.83
COL1A1-212ENST00000510710 RNF181Q9P0P0 153 aa20.21■□□□□ 0.83
COL1A1-212ENST00000510710 DIAPH1O60610 1272 aaKnown RBP20.2■□□□□ 0.82
COL1A1-212ENST00000510710 MTHFSDQ2M296 383 aaKnown RBP20.2■□□□□ 0.82
COL1A1-212ENST00000510710 NARFQ9UHQ1 456 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms