RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 SOS1Q07889 1333 aaPredicted RBP20.39■□□□□ 0.86
CLDND1-222ENST00000510545 BTBD11A6QL63 1104 aa20.39■□□□□ 0.85
CLDND1-222ENST00000510545 NPM2Q86SE8 214 aaKnown RBP20.39■□□□□ 0.85
CLDND1-222ENST00000510545 OVOS2A0A0G2JMS6 1433 aa20.38■□□□□ 0.85
CLDND1-222ENST00000510545 FLIIQ13045 1269 aa20.38■□□□□ 0.85
CLDND1-222ENST00000510545 TATP17735 454 aaPredicted RBP20.37■□□□□ 0.85
CLDND1-222ENST00000510545 ANP32AP39687 249 aaKnown RBP20.37■□□□□ 0.85
CLDND1-222ENST00000510545 ADAMTS7Q9UKP4 1686 aa20.37■□□□□ 0.85
CLDND1-222ENST00000510545 HDGFL1Q5TGJ6 251 aa20.36■□□□□ 0.85
CLDND1-222ENST00000510545 PRDM11Q9NQV5 511 aa20.36■□□□□ 0.85
CLDND1-222ENST00000510545 MEIS3Q99687 375 aa20.36■□□□□ 0.85
CLDND1-222ENST00000510545 NHSL1Q5SYE7 1610 aa20.36■□□□□ 0.85
CLDND1-222ENST00000510545 SLC4A10Q6U841 1118 aa20.35■□□□□ 0.85
CLDND1-222ENST00000510545 KDM6AO15550 1401 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-222ENST00000510545 PHKG2P15735 406 aa20.34■□□□□ 0.85
CLDND1-222ENST00000510545 EIF2S2P20042 333 aaKnown RBP20.34■□□□□ 0.85
CLDND1-222ENST00000510545 NUCB1Q02818 461 aa20.34■□□□□ 0.85
CLDND1-222ENST00000510545 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-222ENST00000510545 ABCA3Q99758 1704 aa20.34■□□□□ 0.85
CLDND1-222ENST00000510545 ATP10DQ9P241 1426 aa20.34■□□□□ 0.85
CLDND1-222ENST00000510545 FKBP5Q13451 457 aaPredicted RBP20.33■□□□□ 0.85
CLDND1-222ENST00000510545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.33■□□□□ 0.85
CLDND1-222ENST00000510545 PHAXQ9H814 394 aaKnown RBP20.33■□□□□ 0.84
CLDND1-222ENST00000510545 SPG7Q9UQ90 795 aa20.33■□□□□ 0.84
CLDND1-222ENST00000510545 CACNA1FO60840 1977 aa20.33■□□□□ 0.84
CLDND1-222ENST00000510545 HOXB7P09629 217 aa20.32■□□□□ 0.84
CLDND1-222ENST00000510545 CYP27B1O15528 508 aa20.32■□□□□ 0.84
CLDND1-222ENST00000510545 WDR17Q8IZU2 1322 aa20.31■□□□□ 0.84
CLDND1-222ENST00000510545 CCT4P50991 539 aaKnown RBP20.31■□□□□ 0.84
CLDND1-222ENST00000510545 IPO9Q96P70 1041 aaKnown RBP20.31■□□□□ 0.84
CLDND1-222ENST00000510545 LNPKQ9C0E8 428 aa20.31■□□□□ 0.84
CLDND1-222ENST00000510545 HEG1Q9ULI3 1381 aa20.31■□□□□ 0.84
CLDND1-222ENST00000510545 COL5A2P05997 1499 aaPredicted RBP20.3■□□□□ 0.84
CLDND1-222ENST00000510545 CHD1LQ86WJ1 897 aa20.3■□□□□ 0.84
CLDND1-222ENST00000510545 GCC1Q96CN9 775 aa20.3■□□□□ 0.84
CLDND1-222ENST00000510545 CHPF2Q9P2E5 772 aa20.3■□□□□ 0.84
CLDND1-222ENST00000510545 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
CLDND1-222ENST00000510545 IFNL2Q8IZJ0 200 aa20.3■□□□□ 0.84
CLDND1-222ENST00000510545 ANKRD44Q8N8A2 993 aa20.3■□□□□ 0.84
CLDND1-222ENST00000510545 SCN11AQ9UI33 1791 aa20.3■□□□□ 0.84
CLDND1-222ENST00000510545 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
CLDND1-222ENST00000510545 SEC24BO95487 1268 aa20.29■□□□□ 0.84
CLDND1-222ENST00000510545 CEP85Q6P2H3 762 aa20.29■□□□□ 0.84
CLDND1-222ENST00000510545 PKD1L3Q7Z443 1732 aa20.29■□□□□ 0.84
CLDND1-222ENST00000510545 ANKRD45Q5TZF3 282 aa20.29■□□□□ 0.84
CLDND1-222ENST00000510545 SLC52A2Q9HAB3 445 aa20.29■□□□□ 0.84
CLDND1-222ENST00000510545 ANXA1P04083 346 aa20.28■□□□□ 0.84
CLDND1-222ENST00000510545 TOM1L2Q6ZVM7 507 aa20.28■□□□□ 0.84
CLDND1-222ENST00000510545 SLC39A6Q13433 755 aa20.27■□□□□ 0.84
CLDND1-222ENST00000510545 NFATC2IPQ8NCF5 419 aa20.27■□□□□ 0.84
CLDND1-222ENST00000510545 PLEKHG2Q9H7P9 1386 aa20.27■□□□□ 0.84
CLDND1-222ENST00000510545 RPAP2Q8IXW5 612 aaPredicted RBP20.26■□□□□ 0.83
CLDND1-222ENST00000510545 DCTPP1Q9H773 170 aa20.26■□□□□ 0.83
CLDND1-222ENST00000510545 PROSER3Q2NL68 480 aa20.24■□□□□ 0.83
CLDND1-222ENST00000510545 ZNF790Q6PG37 636 aa20.24■□□□□ 0.83
CLDND1-222ENST00000510545 LARP1Q6PKG0 1096 aaKnown RBP20.24■□□□□ 0.83
CLDND1-222ENST00000510545 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
CLDND1-222ENST00000510545 STRN4Q9NRL3 753 aa20.24■□□□□ 0.83
CLDND1-222ENST00000510545 PXDNLA1KZ92 1463 aa20.23■□□□□ 0.83
CLDND1-222ENST00000510545 LTBP4Q8N2S1 1624 aa20.23■□□□□ 0.83
CLDND1-222ENST00000510545 ROBO1Q9Y6N7 1651 aa20.23■□□□□ 0.83
CLDND1-222ENST00000510545 MRC1P22897 1456 aa20.23■□□□□ 0.83
CLDND1-222ENST00000510545 N4BP2Q86UW6 1770 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-222ENST00000510545 CARD10Q9BWT7 1032 aa20.23■□□□□ 0.83
CLDND1-222ENST00000510545 CHMP4AQ9BY43 222 aa20.21■□□□□ 0.83
CLDND1-222ENST00000510545 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
CLDND1-222ENST00000510545 NOP58Q9Y2X3 529 aaKnown RBP20.21■□□□□ 0.83
CLDND1-222ENST00000510545 PI4KAP2A4QPH2 592 aa20.21■□□□□ 0.83
CLDND1-222ENST00000510545 GNAI2P04899 355 aa20.21■□□□□ 0.83
CLDND1-222ENST00000510545 PI4KAP1Q8N8J0 262 aa20.21■□□□□ 0.83
CLDND1-222ENST00000510545 ZCRB1Q8TBF4 217 aaKnown RBP20.21■□□□□ 0.83
CLDND1-222ENST00000510545 USP44Q9H0E7 712 aa20.21■□□□□ 0.83
CLDND1-222ENST00000510545 ADCY9O60503 1353 aa20.2■□□□□ 0.82
CLDND1-222ENST00000510545 PARP4Q9UKK3 1724 aaKnown RBP20.2■□□□□ 0.82
CLDND1-222ENST00000510545 EVA1CP58658 441 aa20.2■□□□□ 0.82
CLDND1-222ENST00000510545 ZNF496Q96IT1 587 aaPredicted RBP20.2■□□□□ 0.82
CLDND1-222ENST00000510545 HSP90AB1P08238 724 aaKnown RBP20.19■□□□□ 0.82
CLDND1-222ENST00000510545 GNAI3P08754 354 aa20.18■□□□□ 0.82
CLDND1-222ENST00000510545 IL2RBP14784 551 aa20.18■□□□□ 0.82
CLDND1-222ENST00000510545 PDIA6Q15084 440 aa20.18■□□□□ 0.82
CLDND1-222ENST00000510545 DNAAF4Q8WXU2 420 aa20.18■□□□□ 0.82
CLDND1-222ENST00000510545 C5P01031 1676 aa20.18■□□□□ 0.82
CLDND1-222ENST00000510545 BEND3Q5T5X7 828 aa20.18■□□□□ 0.82
CLDND1-222ENST00000510545 PCDH11XQ9BZA7 1347 aa20.17■□□□□ 0.82
CLDND1-222ENST00000510545 PCDH11YQ9BZA8 1340 aa20.17■□□□□ 0.82
CLDND1-222ENST00000510545 AHDC1Q5TGY3 1603 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-222ENST00000510545 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
CLDND1-222ENST00000510545 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-222ENST00000510545 CABP4P57796 275 aa20.17■□□□□ 0.82
CLDND1-222ENST00000510545 C16orf71Q8IYS4 520 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-222ENST00000510545 BTG4Q9NY30 223 aa20.17■□□□□ 0.82
CLDND1-222ENST00000510545 LRRFIP2Q9Y608 721 aaKnown RBP20.17■□□□□ 0.82
CLDND1-222ENST00000510545 PNMA6EA0A0J9YXQ4 647 aa20.15■□□□□ 0.82
CLDND1-222ENST00000510545 USP35Q9P2H5 1018 aa20.15■□□□□ 0.82
CLDND1-222ENST00000510545 APBB1O00213 710 aa20.15■□□□□ 0.82
CLDND1-222ENST00000510545 SMARCA5O60264 1052 aaPredicted RBP20.15■□□□□ 0.82
CLDND1-222ENST00000510545 HMMRO75330 724 aa20.15■□□□□ 0.82
CLDND1-222ENST00000510545 DDX21Q9NR30 783 aaKnown RBP eCLIP20.15■□□□□ 0.82
CLDND1-222ENST00000510545 SHANK3Q9BYB0 1731 aa20.15■□□□□ 0.82
CLDND1-222ENST00000510545 PLEKHM2Q8IWE5 1019 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms