RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 KDM6AO15550 1401 aaPredicted RBP22■■□□□ 1.11
RAB40C-202ENST00000509637 ATP10DQ9P241 1426 aa22■■□□□ 1.11
RAB40C-202ENST00000509637 GNPATO15228 680 aa22■■□□□ 1.11
RAB40C-202ENST00000509637 GIGYF1O75420 1035 aaPredicted RBP22■■□□□ 1.11
RAB40C-202ENST00000509637 AEBP1Q8IUX7 1158 aa22■■□□□ 1.11
RAB40C-202ENST00000509637 ADCY9O60503 1353 aa21.99■■□□□ 1.11
RAB40C-202ENST00000509637 MYH14Q7Z406 1995 aaKnown RBP21.97■■□□□ 1.11
RAB40C-202ENST00000509637 KIAA1551Q9HCM1 1747 aa21.97■■□□□ 1.11
RAB40C-202ENST00000509637 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
RAB40C-202ENST00000509637 ERVV-2B6SEH9 535 aa21.94■■□□□ 1.1
RAB40C-202ENST00000509637 MMP10P09238 476 aa21.94■■□□□ 1.1
RAB40C-202ENST00000509637 EIF4G2P78344 907 aaKnown RBP eCLIP21.94■■□□□ 1.11e-6■■■■□ 25.9
RAB40C-202ENST00000509637 ARHGEF1Q92888 912 aaKnown RBP21.94■■□□□ 1.1
RAB40C-202ENST00000509637 RBM42Q9BTD8 480 aaKnown RBP21.93■■□□□ 1.1
RAB40C-202ENST00000509637 ZNF530Q6P9A1 599 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-202ENST00000509637 DCAF5Q96JK2 942 aa21.92■■□□□ 1.1
RAB40C-202ENST00000509637 COL5A3P25940 1745 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-202ENST00000509637 PXDNLA1KZ92 1463 aa21.91■■□□□ 1.1
RAB40C-202ENST00000509637 HMGB2P26583 209 aaKnown RBP21.91■■□□□ 1.1
RAB40C-202ENST00000509637 ZNF526Q8TF50 670 aaPredicted RBP21.91■■□□□ 1.1
RAB40C-202ENST00000509637 KIF13BQ9NQT8 1826 aa21.9■■□□□ 1.1
RAB40C-202ENST00000509637 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
RAB40C-202ENST00000509637 GYS1P13807 737 aa21.9■■□□□ 1.1
RAB40C-202ENST00000509637 PLEKHO1Q53GL0 409 aaPredicted RBP21.9■■□□□ 1.1
RAB40C-202ENST00000509637 RC3H1Q5TC82 1133 aaKnown RBP21.9■■□□□ 1.1
RAB40C-202ENST00000509637 ZNF831Q5JPB2 1677 aa21.9■■□□□ 1.1
RAB40C-202ENST00000509637 PLEKHG2Q9H7P9 1386 aa21.89■■□□□ 1.1
RAB40C-202ENST00000509637 A0A0G2JLW4 131 aa21.89■■□□□ 1.09
RAB40C-202ENST00000509637 IL13P35225 146 aa21.89■■□□□ 1.09
RAB40C-202ENST00000509637 TRAPPC3LQ5T215 181 aa21.89■■□□□ 1.09
RAB40C-202ENST00000509637 RPS6KA4O75676 772 aa21.88■■□□□ 1.09
RAB40C-202ENST00000509637 MORC1Q86VD1 984 aa21.88■■□□□ 1.09
RAB40C-202ENST00000509637 RTCBQ9Y3I0 505 aaKnown RBP21.88■■□□□ 1.09
RAB40C-202ENST00000509637 CICQ96RK0 1608 aaPredicted RBP21.88■■□□□ 1.09
RAB40C-202ENST00000509637 CNTNAP4Q9C0A0 1308 aa21.87■■□□□ 1.09
RAB40C-202ENST00000509637 PTCD1O75127 700 aaKnown RBP21.87■■□□□ 1.09
RAB40C-202ENST00000509637 CABP4P57796 275 aa21.87■■□□□ 1.09
RAB40C-202ENST00000509637 SULT6B1Q6IMI4 303 aa21.87■■□□□ 1.09
RAB40C-202ENST00000509637 NFATC2IPQ8NCF5 419 aa21.87■■□□□ 1.09
RAB40C-202ENST00000509637 KCNA3P22001 575 aa21.86■■□□□ 1.09
RAB40C-202ENST00000509637 AMER1Q5JTC6 1135 aaPredicted RBP21.86■■□□□ 1.09
RAB40C-202ENST00000509637 GPBP1L1Q9HC44 474 aaPredicted RBP21.86■■□□□ 1.09
RAB40C-202ENST00000509637 SRP68Q9UHB9 627 aaKnown RBP21.86■■□□□ 1.09
RAB40C-202ENST00000509637 C10orf71Q711Q0 1435 aa21.86■■□□□ 1.09
RAB40C-202ENST00000509637 KIF3CO14782 793 aa21.85■■□□□ 1.09
RAB40C-202ENST00000509637 MTHFSP49914 203 aa21.85■■□□□ 1.09
RAB40C-202ENST00000509637 C4AP0C0L4 1744 aa21.85■■□□□ 1.09
RAB40C-202ENST00000509637 HSP90AB1P08238 724 aaKnown RBP21.84■■□□□ 1.09
RAB40C-202ENST00000509637 DPEP1P16444 411 aa21.84■■□□□ 1.09
RAB40C-202ENST00000509637 AMOTQ4VCS5 1084 aa21.84■■□□□ 1.09
RAB40C-202ENST00000509637 NLGN1Q8N2Q7 840 aa21.84■■□□□ 1.09
RAB40C-202ENST00000509637 LGR6Q9HBX8 967 aa21.84■■□□□ 1.09
RAB40C-202ENST00000509637 TJP1Q07157 1748 aa21.83■■□□□ 1.09
RAB40C-202ENST00000509637 ADAMTS7Q9UKP4 1686 aa21.83■■□□□ 1.09
RAB40C-202ENST00000509637 CRKLP46109 303 aaKnown RBP21.83■■□□□ 1.09
RAB40C-202ENST00000509637 INTS5Q6P9B9 1019 aaKnown RBP21.83■■□□□ 1.09
RAB40C-202ENST00000509637 DDR1Q08345 913 aa21.82■■□□□ 1.08
RAB40C-202ENST00000509637 CEP350Q5VT06 3117 aa21.82■■□□□ 1.08
RAB40C-202ENST00000509637 ADRA2BP18089 450 aa21.81■■□□□ 1.08
RAB40C-202ENST00000509637 TGFB2P61812 414 aa21.81■■□□□ 1.08
RAB40C-202ENST00000509637 FKBP8Q14318 412 aa21.81■■□□□ 1.08
RAB40C-202ENST00000509637 SCN11AQ9UI33 1791 aa21.81■■□□□ 1.08
RAB40C-202ENST00000509637 BRCA1P38398 1863 aaKnown RBP21.81■■□□□ 1.08
RAB40C-202ENST00000509637 BCS1LQ9Y276 419 aa21.8■■□□□ 1.08
RAB40C-202ENST00000509637 PER1O15534 1290 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-202ENST00000509637 RFC4P35249 363 aa21.79■■□□□ 1.08
RAB40C-202ENST00000509637 KIF7Q2M1P5 1343 aa21.79■■□□□ 1.08
RAB40C-202ENST00000509637 C1orf141Q5JVX7 400 aa21.78■■□□□ 1.08
RAB40C-202ENST00000509637 DNAJC10Q8IXB1 793 aa21.78■■□□□ 1.08
RAB40C-202ENST00000509637 HMOX1P09601 288 aa21.77■■□□□ 1.08
RAB40C-202ENST00000509637 SLC39A6Q13433 755 aa21.77■■□□□ 1.08
RAB40C-202ENST00000509637 KNSTRNQ9Y448 316 aa21.77■■□□□ 1.08
RAB40C-202ENST00000509637 USP42Q9H9J4 1324 aaKnown RBP21.77■■□□□ 1.07
RAB40C-202ENST00000509637 HSPA6P17066 643 aa21.76■■□□□ 1.07
RAB40C-202ENST00000509637 RNMTO43148 476 aaKnown RBP21.75■■□□□ 1.07
RAB40C-202ENST00000509637 TM4SF1P30408 202 aa21.75■■□□□ 1.07
RAB40C-202ENST00000509637 ARHGAP27Q6ZUM4 889 aa21.75■■□□□ 1.07
RAB40C-202ENST00000509637 SLC52A2Q9HAB3 445 aa21.75■■□□□ 1.07
RAB40C-202ENST00000509637 CCDC87Q9NVE4 849 aa21.75■■□□□ 1.07
RAB40C-202ENST00000509637 PARP3Q9Y6F1 533 aa21.75■■□□□ 1.07
RAB40C-202ENST00000509637 FCHSD2O94868 740 aa21.74■■□□□ 1.07
RAB40C-202ENST00000509637 MTHFSDQ2M296 383 aaKnown RBP21.74■■□□□ 1.07
RAB40C-202ENST00000509637 AKAP4Q5JQC9 854 aa21.74■■□□□ 1.07
RAB40C-202ENST00000509637 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
RAB40C-202ENST00000509637 CYP19A1P11511 503 aaPredicted RBP21.73■■□□□ 1.07
RAB40C-202ENST00000509637 CHRNA5P30532 468 aa21.73■■□□□ 1.07
RAB40C-202ENST00000509637 KCPQ6ZWJ8 1503 aa21.72■■□□□ 1.07
RAB40C-202ENST00000509637 POLRMTO00411 1230 aaKnown RBP21.72■■□□□ 1.07
RAB40C-202ENST00000509637 BCL2L12Q9HB09 334 aa21.72■■□□□ 1.07
RAB40C-202ENST00000509637 NMRK2Q9NPI5 230 aa21.72■■□□□ 1.07
RAB40C-202ENST00000509637 MRC1P22897 1456 aa21.71■■□□□ 1.07
RAB40C-202ENST00000509637 VIRMAQ69YN4 1812 aaKnown RBP21.71■■□□□ 1.07
RAB40C-202ENST00000509637 SOS1Q07889 1333 aaPredicted RBP21.71■■□□□ 1.07
RAB40C-202ENST00000509637 USPL1Q5W0Q7 1092 aa21.7■■□□□ 1.06
RAB40C-202ENST00000509637 ARFGEF1Q9Y6D6 1849 aa21.69■■□□□ 1.06
RAB40C-202ENST00000509637 CC2D1BQ5T0F9 858 aaKnown RBP21.68■■□□□ 1.06
RAB40C-202ENST00000509637 C9orf131Q5VYM1 1079 aa21.68■■□□□ 1.06
RAB40C-202ENST00000509637 ZBTB1Q9Y2K1 713 aa21.68■■□□□ 1.06
RAB40C-202ENST00000509637 PRELPP51888 382 aa21.67■■□□□ 1.06
RAB40C-202ENST00000509637 NFIXQ14938 502 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms