RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 PKD1L3Q7Z443 1732 aa14.21□□□□□ -0.13
PTPN20-221ENST00000509599 NFAT5O94916 1531 aa14.21□□□□□ -0.13
PTPN20-221ENST00000509599 N4BP2Q86UW6 1770 aaPredicted RBP14.21□□□□□ -0.13
PTPN20-221ENST00000509599 IL2RBP14784 551 aa14.2□□□□□ -0.14
PTPN20-221ENST00000509599 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
PTPN20-221ENST00000509599 NSD2O96028 1365 aa14.2□□□□□ -0.14
PTPN20-221ENST00000509599 KIF13BQ9NQT8 1826 aa14.2□□□□□ -0.14
PTPN20-221ENST00000509599 TOGARAM1Q9Y4F4 1720 aa14.19□□□□□ -0.14
PTPN20-221ENST00000509599 PLCG2P16885 1265 aa14.19□□□□□ -0.14
PTPN20-221ENST00000509599 GSE1Q14687 1217 aa14.19□□□□□ -0.14
PTPN20-221ENST00000509599 LTN1O94822 1766 aa14.19□□□□□ -0.14
PTPN20-221ENST00000509599 TNRC6CQ9HCJ0 1690 aaKnown RBP14.18□□□□□ -0.14
PTPN20-221ENST00000509599 C16orf71Q8IYS4 520 aaPredicted RBP14.18□□□□□ -0.14
PTPN20-221ENST00000509599 FAM163AQ96GL9 167 aaPredicted RBP14.18□□□□□ -0.14
PTPN20-221ENST00000509599 CCNL1Q9UK58 526 aaPredicted RBP14.18□□□□□ -0.14
PTPN20-221ENST00000509599 BRCA1P38398 1863 aaKnown RBP14.18□□□□□ -0.14
PTPN20-221ENST00000509599 UBR3Q6ZT12 1888 aa14.17□□□□□ -0.14
PTPN20-221ENST00000509599 SOX12O15370 315 aa14.17□□□□□ -0.14
PTPN20-221ENST00000509599 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
PTPN20-221ENST00000509599 ANKRD36BQ8N2N9 1353 aa14.15□□□□□ -0.14
PTPN20-221ENST00000509599 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
PTPN20-221ENST00000509599 KCNH5Q8NCM2 988 aa14.15□□□□□ -0.14
PTPN20-221ENST00000509599 SYTL4Q96C24 671 aaPredicted RBP14.15□□□□□ -0.14
PTPN20-221ENST00000509599 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
PTPN20-221ENST00000509599 KDM2AQ9Y2K7 1162 aa14.15□□□□□ -0.14
PTPN20-221ENST00000509599 KIAA1210Q9ULL0 1709 aa14.15□□□□□ -0.14
PTPN20-221ENST00000509599 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
PTPN20-221ENST00000509599 C10orf71Q711Q0 1435 aa14.15□□□□□ -0.14
PTPN20-221ENST00000509599 ERBB3P21860 1342 aa14.15□□□□□ -0.15
PTPN20-221ENST00000509599 ARFGEF1Q9Y6D6 1849 aa14.14□□□□□ -0.15
PTPN20-221ENST00000509599 SBF1O95248 1867 aa14.14□□□□□ -0.15
PTPN20-221ENST00000509599 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
PTPN20-221ENST00000509599 DDX54Q8TDD1 881 aaKnown RBP14.13□□□□□ -0.15
PTPN20-221ENST00000509599 CABP2Q9NPB3 220 aa14.13□□□□□ -0.15
PTPN20-221ENST00000509599 C4BP0C0L5 1744 aa14.12□□□□□ -0.15
PTPN20-221ENST00000509599 PXDNLA1KZ92 1463 aa14.12□□□□□ -0.15
PTPN20-221ENST00000509599 CABP1Q9NZU7 370 aa14.12□□□□□ -0.15
PTPN20-221ENST00000509599 IRX5P78411 483 aaPredicted RBP14.11□□□□□ -0.15
PTPN20-221ENST00000509599 AMIGO3Q86WK7 504 aa14.11□□□□□ -0.15
PTPN20-221ENST00000509599 FLAD1Q8NFF5 587 aa14.11□□□□□ -0.15
PTPN20-221ENST00000509599 PLEKHG2Q9H7P9 1386 aa14.1□□□□□ -0.15
PTPN20-221ENST00000509599 LCE2DQ5TA82 110 aaPredicted RBP14.1□□□□□ -0.15
PTPN20-221ENST00000509599 ARHGAP27Q6ZUM4 889 aa14.1□□□□□ -0.15
PTPN20-221ENST00000509599 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
PTPN20-221ENST00000509599 SMC1BQ8NDV3 1235 aa14.1□□□□□ -0.15
PTPN20-221ENST00000509599 DCAF11Q8TEB1 546 aa14.1□□□□□ -0.15
PTPN20-221ENST00000509599 C9orf131Q5VYM1 1079 aa14.09□□□□□ -0.15
PTPN20-221ENST00000509599 SMIM5Q71RC9 77 aa14.09□□□□□ -0.15
PTPN20-221ENST00000509599 RRAGCQ9HB90 399 aa14.09□□□□□ -0.15
PTPN20-221ENST00000509599 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
PTPN20-221ENST00000509599 TTC21BQ7Z4L5 1316 aa14.09□□□□□ -0.15
PTPN20-221ENST00000509599 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
PTPN20-221ENST00000509599 RGPD2P0DJD1 1756 aa14.08□□□□□ -0.16
PTPN20-221ENST00000509599 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.16
PTPN20-221ENST00000509599 USP47Q96K76 1375 aa14.08□□□□□ -0.16
PTPN20-221ENST00000509599 SLAIN1Q8ND83 568 aa14.07□□□□□ -0.16
PTPN20-221ENST00000509599 OCEL1Q9H607 264 aa14.07□□□□□ -0.16
PTPN20-221ENST00000509599 FOXN1O15353 648 aa14.06□□□□□ -0.16
PTPN20-221ENST00000509599 ANKRD24Q8TF21 1146 aa14.06□□□□□ -0.16
PTPN20-221ENST00000509599 SPOCK2Q92563 424 aa14.06□□□□□ -0.16
PTPN20-221ENST00000509599 PRDM10Q9NQV6 1147 aa14.06□□□□□ -0.16
PTPN20-221ENST00000509599 IFNLR1Q8IU57 520 aaPredicted RBP14.05□□□□□ -0.16
PTPN20-221ENST00000509599 ITGB4P16144 1822 aa14.04□□□□□ -0.16
PTPN20-221ENST00000509599 A0A0G2JLW4 131 aa14.04□□□□□ -0.16
PTPN20-221ENST00000509599 TTC21AQ8NDW8 1320 aa14.04□□□□□ -0.16
PTPN20-221ENST00000509599 MON2Q7Z3U7 1717 aa14.04□□□□□ -0.16
PTPN20-221ENST00000509599 CHRM1P11229 460 aaPredicted RBP14.03□□□□□ -0.16
PTPN20-221ENST00000509599 PDE4DIPQ5VU43 2346 aa14.03□□□□□ -0.16
PTPN20-221ENST00000509599 CCDC88AQ3V6T2 1871 aa14.02□□□□□ -0.16
PTPN20-221ENST00000509599 MAP2P11137 1827 aaKnown RBP14.02□□□□□ -0.16
PTPN20-221ENST00000509599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.02□□□□□ -0.17
PTPN20-221ENST00000509599 PHF14O94880 888 aa14.02□□□□□ -0.17
PTPN20-221ENST00000509599 TGFB2P61812 414 aa14.02□□□□□ -0.17
PTPN20-221ENST00000509599 MLLT1Q03111 559 aaPredicted RBP14.02□□□□□ -0.17
PTPN20-221ENST00000509599 GOLGA2Q08379 1002 aa14.02□□□□□ -0.17
PTPN20-221ENST00000509599 ABHD8Q96I13 439 aa14.02□□□□□ -0.17
PTPN20-221ENST00000509599 STAC3Q96MF2 364 aa14.02□□□□□ -0.17
PTPN20-221ENST00000509599 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
PTPN20-221ENST00000509599 FCHSD2O94868 740 aa14.01□□□□□ -0.17
PTPN20-221ENST00000509599 AK7Q96M32 723 aa14.01□□□□□ -0.17
PTPN20-221ENST00000509599 VIRMAQ69YN4 1812 aaKnown RBP14.01□□□□□ -0.17
PTPN20-221ENST00000509599 PALLDQ8WX93 1383 aa14□□□□□ -0.17
PTPN20-221ENST00000509599 CENPJQ9HC77 1338 aaPredicted RBP14□□□□□ -0.17
PTPN20-221ENST00000509599 RNF181Q9P0P0 153 aa14□□□□□ -0.17
PTPN20-221ENST00000509599 NSD3Q9BZ95 1437 aa13.99□□□□□ -0.17
PTPN20-221ENST00000509599 TNRC18O15417 2968 aaPredicted RBP13.99□□□□□ -0.17
PTPN20-221ENST00000509599 MMP10P09238 476 aa13.99□□□□□ -0.17
PTPN20-221ENST00000509599 DPEP1P16444 411 aa13.99□□□□□ -0.17
PTPN20-221ENST00000509599 MEGF6O75095 1541 aa13.99□□□□□ -0.17
PTPN20-221ENST00000509599 USP31Q70CQ4 1352 aa13.98□□□□□ -0.17
PTPN20-221ENST00000509599 PSEN1P49768 467 aa13.98□□□□□ -0.17
PTPN20-221ENST00000509599 RGS19P49795 217 aa13.98□□□□□ -0.17
PTPN20-221ENST00000509599 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
PTPN20-221ENST00000509599 MKRN1Q9UHC7 482 aaKnown RBP13.98□□□□□ -0.17
PTPN20-221ENST00000509599 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
PTPN20-221ENST00000509599 KCNA3P22001 575 aa13.97□□□□□ -0.17
PTPN20-221ENST00000509599 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
PTPN20-221ENST00000509599 SSFA2P28290 1259 aa13.97□□□□□ -0.17
PTPN20-221ENST00000509599 CTCFP49711 727 aaPredicted RBP13.97□□□□□ -0.17
PTPN20-221ENST00000509599 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms