RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 WASHC2AQ641Q2 1341 aa14.3□□□□□ -0.12
CYSTM1-203ENST00000509589 PXDNLA1KZ92 1463 aa14.3□□□□□ -0.12
CYSTM1-203ENST00000509589 CICQ96RK0 1608 aaPredicted RBP14.3□□□□□ -0.12
CYSTM1-203ENST00000509589 TNNT2P45379 298 aaPredicted RBP14.29□□□□□ -0.12
CYSTM1-203ENST00000509589 CDCA8Q53HL2 280 aa14.29□□□□□ -0.12
CYSTM1-203ENST00000509589 POLKQ9UBT6 870 aa14.29□□□□□ -0.12
CYSTM1-203ENST00000509589 KDRP35968 1356 aa14.29□□□□□ -0.12
CYSTM1-203ENST00000509589 SLC4A9Q96Q91 983 aa14.28□□□□□ -0.12
CYSTM1-203ENST00000509589 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.28□□□□□ -0.12
CYSTM1-203ENST00000509589 EIF4A2Q14240 407 aaKnown RBP14.27□□□□□ -0.13
CYSTM1-203ENST00000509589 IFNL2Q8IZJ0 200 aa14.27□□□□□ -0.13
CYSTM1-203ENST00000509589 VIRMAQ69YN4 1812 aaKnown RBP14.27□□□□□ -0.13
CYSTM1-203ENST00000509589 KIF13BQ9NQT8 1826 aa14.27□□□□□ -0.13
CYSTM1-203ENST00000509589 A0A0G2JLW4 131 aa14.26□□□□□ -0.13
CYSTM1-203ENST00000509589 C10orf71Q711Q0 1435 aa14.25□□□□□ -0.13
CYSTM1-203ENST00000509589 C4AP0C0L4 1744 aa14.24□□□□□ -0.13
CYSTM1-203ENST00000509589 COL5A3P25940 1745 aaPredicted RBP14.24□□□□□ -0.13
CYSTM1-203ENST00000509589 RBM42Q9BTD8 480 aaKnown RBP14.24□□□□□ -0.13
CYSTM1-203ENST00000509589 BCS1LQ9Y276 419 aa14.24□□□□□ -0.13
CYSTM1-203ENST00000509589 GYS1P13807 737 aa14.23□□□□□ -0.13
CYSTM1-203ENST00000509589 TRAPPC3LQ5T215 181 aa14.23□□□□□ -0.13
CYSTM1-203ENST00000509589 ARHGEF1Q92888 912 aaKnown RBP14.23□□□□□ -0.13
CYSTM1-203ENST00000509589 RTCBQ9Y3I0 505 aaKnown RBP14.23□□□□□ -0.13
CYSTM1-203ENST00000509589 KDM6AO15550 1401 aaPredicted RBP14.23□□□□□ -0.13
CYSTM1-203ENST00000509589 MYH14Q7Z406 1995 aaKnown RBP14.22□□□□□ -0.13
CYSTM1-203ENST00000509589 DPEP1P16444 411 aa14.22□□□□□ -0.13
CYSTM1-203ENST00000509589 TGFB2P61812 414 aa14.22□□□□□ -0.13
CYSTM1-203ENST00000509589 ZNF831Q5JPB2 1677 aa14.21□□□□□ -0.13
CYSTM1-203ENST00000509589 ARHGAP27Q6ZUM4 889 aa14.21□□□□□ -0.13
CYSTM1-203ENST00000509589 NLGN1Q8N2Q7 840 aa14.21□□□□□ -0.13
CYSTM1-203ENST00000509589 NMRK2Q9NPI5 230 aa14.21□□□□□ -0.13
CYSTM1-203ENST00000509589 CNTNAP4Q9C0A0 1308 aa14.2□□□□□ -0.14
CYSTM1-203ENST00000509589 ERVV-2B6SEH9 535 aa14.2□□□□□ -0.14
CYSTM1-203ENST00000509589 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
CYSTM1-203ENST00000509589 BRCA1P38398 1863 aaKnown RBP14.2□□□□□ -0.14
CYSTM1-203ENST00000509589 RPS6KA4O75676 772 aa14.19□□□□□ -0.14
CYSTM1-203ENST00000509589 FCHSD2O94868 740 aa14.19□□□□□ -0.14
CYSTM1-203ENST00000509589 ADRA2BP18089 450 aa14.19□□□□□ -0.14
CYSTM1-203ENST00000509589 KCNA3P22001 575 aa14.19□□□□□ -0.14
CYSTM1-203ENST00000509589 RFC4P35249 363 aa14.19□□□□□ -0.14
CYSTM1-203ENST00000509589 RC3H1Q5TC82 1133 aaKnown RBP14.19□□□□□ -0.14
CYSTM1-203ENST00000509589 CCDC87Q9NVE4 849 aa14.19□□□□□ -0.14
CYSTM1-203ENST00000509589 SRP68Q9UHB9 627 aaKnown RBP14.19□□□□□ -0.14
CYSTM1-203ENST00000509589 PTCD1O75127 700 aaKnown RBP14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 TOMM70O94826 608 aa14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 APLP1P51693 650 aa14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 TRIM26Q12899 539 aaPredicted RBP14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 ZNF530Q6P9A1 599 aaPredicted RBP14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 AEBP1Q8IUX7 1158 aa14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 DNAJC5GQ8N7S2 189 aa14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 PARP3Q9Y6F1 533 aa14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 PLEKHG2Q9H7P9 1386 aa14.18□□□□□ -0.14
CYSTM1-203ENST00000509589 CABP4P57796 275 aa14.17□□□□□ -0.14
CYSTM1-203ENST00000509589 TJP1Q07157 1748 aa14.17□□□□□ -0.14
CYSTM1-203ENST00000509589 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
CYSTM1-203ENST00000509589 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
CYSTM1-203ENST00000509589 CRKLP46109 303 aaKnown RBP14.16□□□□□ -0.14
CYSTM1-203ENST00000509589 HTRA3P83110 453 aa14.16□□□□□ -0.14
CYSTM1-203ENST00000509589 DDR1Q08345 913 aa14.16□□□□□ -0.14
CYSTM1-203ENST00000509589 FKBP8Q14318 412 aa14.16□□□□□ -0.14
CYSTM1-203ENST00000509589 PLEKHO1Q53GL0 409 aaPredicted RBP14.16□□□□□ -0.14
CYSTM1-203ENST00000509589 C9orf131Q5VYM1 1079 aa14.16□□□□□ -0.14
CYSTM1-203ENST00000509589 ARFGEF1Q9Y6D6 1849 aa14.15□□□□□ -0.14
CYSTM1-203ENST00000509589 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
CYSTM1-203ENST00000509589 USP42Q9H9J4 1324 aaKnown RBP14.15□□□□□ -0.15
CYSTM1-203ENST00000509589 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
CYSTM1-203ENST00000509589 CHRNA5P30532 468 aa14.14□□□□□ -0.15
CYSTM1-203ENST00000509589 MTHFSP49914 203 aa14.14□□□□□ -0.15
CYSTM1-203ENST00000509589 NFATC2IPQ8NCF5 419 aa14.14□□□□□ -0.15
CYSTM1-203ENST00000509589 CCDC88AQ3V6T2 1871 aa14.14□□□□□ -0.15
CYSTM1-203ENST00000509589 WDR90Q96KV7 1748 aa14.13□□□□□ -0.15
CYSTM1-203ENST00000509589 PCNTO95613 3336 aa14.13□□□□□ -0.15
CYSTM1-203ENST00000509589 AMOTQ4VCS5 1084 aa14.13□□□□□ -0.15
CYSTM1-203ENST00000509589 INTS5Q6P9B9 1019 aaKnown RBP14.13□□□□□ -0.15
CYSTM1-203ENST00000509589 PANK3Q9H999 370 aa14.13□□□□□ -0.15
CYSTM1-203ENST00000509589 PIM2Q9P1W9 311 aa14.13□□□□□ -0.15
CYSTM1-203ENST00000509589 C1orf141Q5JVX7 400 aa14.12□□□□□ -0.15
CYSTM1-203ENST00000509589 RBM46Q8TBY0 533 aaKnown RBP14.12□□□□□ -0.15
CYSTM1-203ENST00000509589 RNF181Q9P0P0 153 aa14.12□□□□□ -0.15
CYSTM1-203ENST00000509589 AFDNP55196 1824 aaKnown RBP14.12□□□□□ -0.15
CYSTM1-203ENST00000509589 POLRMTO00411 1230 aaKnown RBP14.11□□□□□ -0.15
CYSTM1-203ENST00000509589 SBF1O95248 1867 aa14.11□□□□□ -0.15
CYSTM1-203ENST00000509589 DALRD3Q5D0E6 543 aaKnown RBP14.11□□□□□ -0.15
CYSTM1-203ENST00000509589 SULT6B1Q6IMI4 303 aa14.11□□□□□ -0.15
CYSTM1-203ENST00000509589 HSPA5P11021 654 aaKnown RBP14.1□□□□□ -0.15
CYSTM1-203ENST00000509589 DNAJC10Q8IXB1 793 aa14.1□□□□□ -0.15
CYSTM1-203ENST00000509589 CACNA1SQ13698 1873 aa14.1□□□□□ -0.15
CYSTM1-203ENST00000509589 TM4SF1P30408 202 aa14.09□□□□□ -0.15
CYSTM1-203ENST00000509589 RASSF7Q02833 373 aa14.09□□□□□ -0.15
CYSTM1-203ENST00000509589 USPL1Q5W0Q7 1092 aa14.09□□□□□ -0.15
CYSTM1-203ENST00000509589 MORC1Q86VD1 984 aa14.09□□□□□ -0.15
CYSTM1-203ENST00000509589 C16orf71Q8IYS4 520 aaPredicted RBP14.09□□□□□ -0.15
CYSTM1-203ENST00000509589 RRAGCQ9HB90 399 aa14.09□□□□□ -0.15
CYSTM1-203ENST00000509589 IL13P35225 146 aa14.08□□□□□ -0.16
CYSTM1-203ENST00000509589 LGR6Q9HBX8 967 aa14.08□□□□□ -0.16
CYSTM1-203ENST00000509589 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.16
CYSTM1-203ENST00000509589 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.16
CYSTM1-203ENST00000509589 PRELPP51888 382 aa14.07□□□□□ -0.16
CYSTM1-203ENST00000509589 SLC39A6Q13433 755 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms