RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 DCAF5Q96JK2 942 aa20.03■□□□□ 0.8
UBE2D3-228ENST00000508974 ARXQ96QS3 562 aa20.03■□□□□ 0.8
UBE2D3-228ENST00000508974 NPC1L1Q9UHC9 1359 aa20.03■□□□□ 0.8
UBE2D3-228ENST00000508974 LOC102724428A0A0B4J2F2 783 aa20.02■□□□□ 0.8
UBE2D3-228ENST00000508974 HSP90AB1P08238 724 aaKnown RBP20.02■□□□□ 0.8
UBE2D3-228ENST00000508974 SIK1P57059 783 aa20.02■□□□□ 0.8
UBE2D3-228ENST00000508974 SMIM5Q71RC9 77 aa20.02■□□□□ 0.8
UBE2D3-228ENST00000508974 COL23A1Q86Y22 540 aaPredicted RBP20.02■□□□□ 0.8
UBE2D3-228ENST00000508974 AK7Q96M32 723 aa20.02■□□□□ 0.8
UBE2D3-228ENST00000508974 ATG3Q9NT62 314 aa20.02■□□□□ 0.8
UBE2D3-228ENST00000508974 COL3A1P02461 1466 aaPredicted RBP20.02■□□□□ 0.8
UBE2D3-228ENST00000508974 SLC16A10Q8TF71 515 aa20.01■□□□□ 0.79
UBE2D3-228ENST00000508974 ERVV-2B6SEH9 535 aa20■□□□□ 0.79
UBE2D3-228ENST00000508974 PHF14O94880 888 aa20■□□□□ 0.79
UBE2D3-228ENST00000508974 ATP6V1AP38606 617 aa20■□□□□ 0.79
UBE2D3-228ENST00000508974 CABP4P57796 275 aa20■□□□□ 0.79
UBE2D3-228ENST00000508974 MSL1Q68DK7 614 aa20■□□□□ 0.79
UBE2D3-228ENST00000508974 LINC00116Q8NCU8 138 aa20■□□□□ 0.79
UBE2D3-228ENST00000508974 U2SURPO15042 1029 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-228ENST00000508974 POLD1P28340 1107 aa19.99■□□□□ 0.79
UBE2D3-228ENST00000508974 ITPK1Q13572 414 aa19.99■□□□□ 0.79
UBE2D3-228ENST00000508974 AMIGO3Q86WK7 504 aa19.99■□□□□ 0.79
UBE2D3-228ENST00000508974 SYT17Q9BSW7 474 aa19.99■□□□□ 0.79
UBE2D3-228ENST00000508974 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-228ENST00000508974 COL5A3P25940 1745 aaPredicted RBP19.96■□□□□ 0.79
UBE2D3-228ENST00000508974 AKAP4Q5JQC9 854 aa19.95■□□□□ 0.78
UBE2D3-228ENST00000508974 NFATC2IPQ8NCF5 419 aa19.95■□□□□ 0.78
UBE2D3-228ENST00000508974 GNPATO15228 680 aa19.94■□□□□ 0.78
UBE2D3-228ENST00000508974 PTCD1O75127 700 aaKnown RBP19.94■□□□□ 0.78
UBE2D3-228ENST00000508974 MTHFSDQ2M296 383 aaKnown RBP19.94■□□□□ 0.78
UBE2D3-228ENST00000508974 SLC4A9Q96Q91 983 aa19.94■□□□□ 0.78
UBE2D3-228ENST00000508974 LGR6Q9HBX8 967 aa19.94■□□□□ 0.78
UBE2D3-228ENST00000508974 ZNF831Q5JPB2 1677 aa19.94■□□□□ 0.78
UBE2D3-228ENST00000508974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.93■□□□□ 0.78
UBE2D3-228ENST00000508974 HMGB2P26583 209 aaKnown RBP19.93■□□□□ 0.78
UBE2D3-228ENST00000508974 FLAD1Q8NFF5 587 aa19.93■□□□□ 0.78
UBE2D3-228ENST00000508974 PPP2R1AP30153 589 aa19.92■□□□□ 0.78
UBE2D3-228ENST00000508974 CFAP53Q96M91 514 aa19.92■□□□□ 0.78
UBE2D3-228ENST00000508974 TJP1Q07157 1748 aa19.92■□□□□ 0.78
UBE2D3-228ENST00000508974 RNMTO43148 476 aaKnown RBP19.89■□□□□ 0.77
UBE2D3-228ENST00000508974 SSFA2P28290 1259 aa19.89■□□□□ 0.77
UBE2D3-228ENST00000508974 MYH14Q7Z406 1995 aaKnown RBP19.89■□□□□ 0.77
UBE2D3-228ENST00000508974 NLGN2Q8NFZ4 835 aa19.89■□□□□ 0.77
UBE2D3-228ENST00000508974 MAP3K5Q99683 1374 aa19.89■□□□□ 0.77
UBE2D3-228ENST00000508974 SLC52A2Q9HAB3 445 aa19.89■□□□□ 0.77
UBE2D3-228ENST00000508974 ADAMTS7Q9UKP4 1686 aa19.89■□□□□ 0.77
UBE2D3-228ENST00000508974 MRC1P22897 1456 aa19.88■□□□□ 0.77
UBE2D3-228ENST00000508974 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
UBE2D3-228ENST00000508974 C4AP0C0L4 1744 aa19.88■□□□□ 0.77
UBE2D3-228ENST00000508974 UTRNP46939 3433 aa19.87■□□□□ 0.77
UBE2D3-228ENST00000508974 YY1P25490 414 aa19.87■□□□□ 0.77
UBE2D3-228ENST00000508974 SLC39A6Q13433 755 aa19.87■□□□□ 0.77
UBE2D3-228ENST00000508974 PRKAR2BP31323 418 aa19.86■□□□□ 0.77
UBE2D3-228ENST00000508974 RTCBQ9Y3I0 505 aaKnown RBP19.86■□□□□ 0.77
UBE2D3-228ENST00000508974 CICQ96RK0 1608 aaPredicted RBP19.85■□□□□ 0.77
UBE2D3-228ENST00000508974 U2AF1L5P0DN76 240 aaPredicted RBP19.84■□□□□ 0.77
UBE2D3-228ENST00000508974 U2AF1Q01081 240 aaKnown RBP eCLIP19.84■□□□□ 0.772e-12■□□□□ 11.1
UBE2D3-228ENST00000508974 GPR162Q16538 588 aa19.84■□□□□ 0.77
UBE2D3-228ENST00000508974 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
UBE2D3-228ENST00000508974 SIPA1L3O60292 1781 aaPredicted RBP19.83■□□□□ 0.77
UBE2D3-228ENST00000508974 UBR2Q8IWV8 1755 aa19.83■□□□□ 0.77
UBE2D3-228ENST00000508974 CNTNAP4Q9C0A0 1308 aa19.83■□□□□ 0.77
UBE2D3-228ENST00000508974 KCPQ6ZWJ8 1503 aa19.83■□□□□ 0.77
UBE2D3-228ENST00000508974 TRAPPC3LQ5T215 181 aa19.83■□□□□ 0.77
UBE2D3-228ENST00000508974 GAS2L2Q8NHY3 880 aa19.83■□□□□ 0.77
UBE2D3-228ENST00000508974 PHACTR3Q96KR7 559 aa19.83■□□□□ 0.77
UBE2D3-228ENST00000508974 RSPH6AQ9H0K4 717 aa19.83■□□□□ 0.77
UBE2D3-228ENST00000508974 GOLGB1Q14789 3259 aaKnown RBP19.83■□□□□ 0.76
UBE2D3-228ENST00000508974 CHD4Q14839 1912 aa19.82■□□□□ 0.76
UBE2D3-228ENST00000508974 GNAT3A8MTJ3 354 aa19.82■□□□□ 0.76
UBE2D3-228ENST00000508974 CRKLP46109 303 aaKnown RBP19.82■□□□□ 0.76
UBE2D3-228ENST00000508974 RC3H1Q5TC82 1133 aaKnown RBP19.81■□□□□ 0.76
UBE2D3-228ENST00000508974 DNAJC10Q8IXB1 793 aa19.81■□□□□ 0.76
UBE2D3-228ENST00000508974 ARHGEF1Q92888 912 aaKnown RBP19.81■□□□□ 0.76
UBE2D3-228ENST00000508974 RPS6KA4O75676 772 aa19.8■□□□□ 0.76
UBE2D3-228ENST00000508974 TEFQ10587 303 aa19.8■□□□□ 0.76
UBE2D3-228ENST00000508974 RFC4P35249 363 aa19.79■□□□□ 0.76
UBE2D3-228ENST00000508974 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
UBE2D3-228ENST00000508974 IL17REQ8NFR9 667 aa19.79■□□□□ 0.76
UBE2D3-228ENST00000508974 MMP10P09238 476 aa19.78■□□□□ 0.76
UBE2D3-228ENST00000508974 WWC3Q9ULE0 1092 aa19.78■□□□□ 0.76
UBE2D3-228ENST00000508974 TTC5Q8N0Z6 440 aa19.77■□□□□ 0.76
UBE2D3-228ENST00000508974 DLG5Q8TDM6 1919 aa19.76■□□□□ 0.75
UBE2D3-228ENST00000508974 INTS5Q6P9B9 1019 aaKnown RBP19.76■□□□□ 0.75
UBE2D3-228ENST00000508974 CCDC87Q9NVE4 849 aa19.76■□□□□ 0.75
UBE2D3-228ENST00000508974 SRP68Q9UHB9 627 aaKnown RBP19.76■□□□□ 0.75
UBE2D3-228ENST00000508974 CD2APQ9Y5K6 639 aa19.76■□□□□ 0.75
UBE2D3-228ENST00000508974 GYS1P13807 737 aa19.75■□□□□ 0.75
UBE2D3-228ENST00000508974 N4BP2Q86UW6 1770 aaPredicted RBP19.75■□□□□ 0.75
UBE2D3-228ENST00000508974 FCHSD2O94868 740 aa19.74■□□□□ 0.75
UBE2D3-228ENST00000508974 CYP19A1P11511 503 aaPredicted RBP19.74■□□□□ 0.75
UBE2D3-228ENST00000508974 YBX3P16989 372 aaKnown RBP eCLIP19.74■□□□□ 0.75
UBE2D3-228ENST00000508974 MCM10Q7L590 875 aa19.74■□□□□ 0.75
UBE2D3-228ENST00000508974 NLGN1Q8N2Q7 840 aa19.73■□□□□ 0.75
UBE2D3-228ENST00000508974 CEMIPQ8WUJ3 1361 aa19.72■□□□□ 0.75
UBE2D3-228ENST00000508974 KIF13BQ9NQT8 1826 aa19.72■□□□□ 0.75
UBE2D3-228ENST00000508974 DCTN1Q14203 1278 aa19.72■□□□□ 0.75
UBE2D3-228ENST00000508974 ZNF790Q6PG37 636 aa19.72■□□□□ 0.75
UBE2D3-228ENST00000508974 RTF1Q92541 710 aaKnown RBP19.72■□□□□ 0.75
UBE2D3-228ENST00000508974 ZNF496Q96IT1 587 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms