RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 DIAPH1O60610 1272 aaKnown RBP21.09■□□□□ 0.97
DDR1-264ENST00000508472 SSFA2P28290 1259 aa21.09■□□□□ 0.97
DDR1-264ENST00000508472 ATG3Q9NT62 314 aa21.09■□□□□ 0.97
DDR1-264ENST00000508472 UBR3Q6ZT12 1888 aa21.07■□□□□ 0.96
DDR1-264ENST00000508472 ZNF831Q5JPB2 1677 aa21.07■□□□□ 0.96
DDR1-264ENST00000508472 AKAP4Q5JQC9 854 aa21.06■□□□□ 0.96
DDR1-264ENST00000508472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.05■□□□□ 0.96
DDR1-264ENST00000508472 PHF14O94880 888 aa21.05■□□□□ 0.96
DDR1-264ENST00000508472 GPR162Q16538 588 aa21.05■□□□□ 0.96
DDR1-264ENST00000508472 LINC00116Q8NCU8 138 aa21.05■□□□□ 0.96
DDR1-264ENST00000508472 RBM42Q9BTD8 480 aaKnown RBP21.05■□□□□ 0.96
DDR1-264ENST00000508472 KDM6AO15550 1401 aaPredicted RBP21.04■□□□□ 0.96
DDR1-264ENST00000508472 GNPATO15228 680 aa21.04■□□□□ 0.96
DDR1-264ENST00000508472 SCN11AQ9UI33 1791 aa21.03■□□□□ 0.96
DDR1-264ENST00000508472 MSL1Q68DK7 614 aa21.03■□□□□ 0.96
DDR1-264ENST00000508472 CHD4Q14839 1912 aa21.02■□□□□ 0.96
DDR1-264ENST00000508472 HMOX1P09601 288 aa21.02■□□□□ 0.96
DDR1-264ENST00000508472 ITPK1Q13572 414 aa21.02■□□□□ 0.96
DDR1-264ENST00000508472 CNGB1Q14028 1251 aaPredicted RBP21.02■□□□□ 0.96
DDR1-264ENST00000508472 CFAP53Q96M91 514 aa21.02■□□□□ 0.96
DDR1-264ENST00000508472 RTCBQ9Y3I0 505 aaKnown RBP21.02■□□□□ 0.96
DDR1-264ENST00000508472 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
DDR1-264ENST00000508472 RC3H1Q5TC82 1133 aaKnown RBP21.01■□□□□ 0.95
DDR1-264ENST00000508472 NFATC2IPQ8NCF5 419 aa21.01■□□□□ 0.95
DDR1-264ENST00000508472 ADRA2BP18089 450 aa21■□□□□ 0.95
DDR1-264ENST00000508472 TRAPPC3LQ5T215 181 aa21■□□□□ 0.95
DDR1-264ENST00000508472 U2SURPO15042 1029 aaKnown RBP20.99■□□□□ 0.95
DDR1-264ENST00000508472 PELP1Q8IZL8 1130 aaKnown RBP20.99■□□□□ 0.95
DDR1-264ENST00000508472 CNTNAP4Q9C0A0 1308 aa20.99■□□□□ 0.95
DDR1-264ENST00000508472 COL5A3P25940 1745 aaPredicted RBP20.98■□□□□ 0.95
DDR1-264ENST00000508472 GRIN3BO60391 1043 aa20.97■□□□□ 0.95
DDR1-264ENST00000508472 PTCD1O75127 700 aaKnown RBP20.97■□□□□ 0.95
DDR1-264ENST00000508472 VIRMAQ69YN4 1812 aaKnown RBP20.97■□□□□ 0.95
DDR1-264ENST00000508472 SLC52A2Q9HAB3 445 aa20.96■□□□□ 0.95
DDR1-264ENST00000508472 NUDCQ9Y266 331 aa20.96■□□□□ 0.95
DDR1-264ENST00000508472 RFC4P35249 363 aa20.95■□□□□ 0.94
DDR1-264ENST00000508472 NLGN1Q8N2Q7 840 aa20.95■□□□□ 0.94
DDR1-264ENST00000508472 NLGN2Q8NFZ4 835 aa20.95■□□□□ 0.94
DDR1-264ENST00000508472 GAS2L2Q8NHY3 880 aa20.95■□□□□ 0.94
DDR1-264ENST00000508472 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
DDR1-264ENST00000508472 MTHFSDQ2M296 383 aaKnown RBP20.94■□□□□ 0.94
DDR1-264ENST00000508472 AMIGO3Q86WK7 504 aa20.94■□□□□ 0.94
DDR1-264ENST00000508472 SLC4A9Q96Q91 983 aa20.94■□□□□ 0.94
DDR1-264ENST00000508472 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
DDR1-264ENST00000508472 UTRNP46939 3433 aa20.93■□□□□ 0.94
DDR1-264ENST00000508472 RNMTO43148 476 aaKnown RBP20.93■□□□□ 0.94
DDR1-264ENST00000508472 MRC1P22897 1456 aa20.93■□□□□ 0.94
DDR1-264ENST00000508472 CICQ96RK0 1608 aaPredicted RBP20.93■□□□□ 0.94
DDR1-264ENST00000508472 SMIM5Q71RC9 77 aa20.91■□□□□ 0.94
DDR1-264ENST00000508472 ARHGEF1Q92888 912 aaKnown RBP20.91■□□□□ 0.94
DDR1-264ENST00000508472 LGR6Q9HBX8 967 aa20.91■□□□□ 0.94
DDR1-264ENST00000508472 ADAMTS7Q9UKP4 1686 aa20.89■□□□□ 0.94
DDR1-264ENST00000508472 GNAT3A8MTJ3 354 aa20.89■□□□□ 0.93
DDR1-264ENST00000508472 CRKLP46109 303 aaKnown RBP20.89■□□□□ 0.93
DDR1-264ENST00000508472 TEFQ10587 303 aa20.89■□□□□ 0.93
DDR1-264ENST00000508472 TJP1Q07157 1748 aa20.89■□□□□ 0.93
DDR1-264ENST00000508472 MMP10P09238 476 aa20.88■□□□□ 0.93
DDR1-264ENST00000508472 TTC5Q8N0Z6 440 aa20.88■□□□□ 0.93
DDR1-264ENST00000508472 MYH14Q7Z406 1995 aaKnown RBP20.88■□□□□ 0.93
DDR1-264ENST00000508472 PPP2R1AP30153 589 aa20.87■□□□□ 0.93
DDR1-264ENST00000508472 VSIG10Q8N0Z9 540 aa20.87■□□□□ 0.93
DDR1-264ENST00000508472 ZNF784Q8NCA9 323 aaPredicted RBP20.86■□□□□ 0.93
DDR1-264ENST00000508472 CCDC87Q9NVE4 849 aa20.86■□□□□ 0.93
DDR1-264ENST00000508472 PARP3Q9Y6F1 533 aa20.86■□□□□ 0.93
DDR1-264ENST00000508472 C4AP0C0L4 1744 aa20.86■□□□□ 0.93
DDR1-264ENST00000508472 GOLGB1Q14789 3259 aaKnown RBP20.86■□□□□ 0.93
DDR1-264ENST00000508472 U2AF1L5P0DN76 240 aaPredicted RBP20.85■□□□□ 0.93
DDR1-264ENST00000508472 U2AF1Q01081 240 aaKnown RBP eCLIP20.85■□□□□ 0.93
DDR1-264ENST00000508472 NEFMP07197 916 aa20.84■□□□□ 0.93
DDR1-264ENST00000508472 GYS1P13807 737 aa20.84■□□□□ 0.93
DDR1-264ENST00000508472 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.93
DDR1-264ENST00000508472 PRKAR2BP31323 418 aa20.84■□□□□ 0.93
DDR1-264ENST00000508472 SLC39A6Q13433 755 aa20.84■□□□□ 0.93
DDR1-264ENST00000508472 ZPR1O75312 459 aa20.83■□□□□ 0.93
DDR1-264ENST00000508472 FCHSD2O94868 740 aa20.83■□□□□ 0.93
DDR1-264ENST00000508472 STARD3NLO95772 234 aa20.83■□□□□ 0.93
DDR1-264ENST00000508472 TGFB2P61812 414 aa20.83■□□□□ 0.93
DDR1-264ENST00000508472 DNAJC10Q8IXB1 793 aa20.83■□□□□ 0.93
DDR1-264ENST00000508472 INTS5Q6P9B9 1019 aaKnown RBP20.82■□□□□ 0.92
DDR1-264ENST00000508472 RTF1Q92541 710 aaKnown RBP20.82■□□□□ 0.92
DDR1-264ENST00000508472 TEX13AQ9BXU3 409 aaPredicted RBP20.82■□□□□ 0.92
DDR1-264ENST00000508472 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
DDR1-264ENST00000508472 KIF13BQ9NQT8 1826 aa20.82■□□□□ 0.92
DDR1-264ENST00000508472 UBR2Q8IWV8 1755 aa20.82■□□□□ 0.92
DDR1-264ENST00000508472 USP42Q9H9J4 1324 aaKnown RBP20.81■□□□□ 0.92
DDR1-264ENST00000508472 CYP19A1P11511 503 aaPredicted RBP20.81■□□□□ 0.92
DDR1-264ENST00000508472 KCPQ6ZWJ8 1503 aa20.81■□□□□ 0.92
DDR1-264ENST00000508472 IL17REQ8NFR9 667 aa20.8■□□□□ 0.92
DDR1-264ENST00000508472 ZNF790Q6PG37 636 aa20.79■□□□□ 0.92
DDR1-264ENST00000508472 SIPA1L3O60292 1781 aaPredicted RBP20.79■□□□□ 0.92
DDR1-264ENST00000508472 SOS1Q07889 1333 aaPredicted RBP20.78■□□□□ 0.92
DDR1-264ENST00000508472 PHACTR3Q96KR7 559 aa20.78■□□□□ 0.92
DDR1-264ENST00000508472 FMNL2Q96PY5 1086 aa20.78■□□□□ 0.92
DDR1-264ENST00000508472 PNNQ9H307 717 aaKnown RBP20.78■□□□□ 0.92
DDR1-264ENST00000508472 C10orf71Q711Q0 1435 aa20.78■□□□□ 0.92
DDR1-264ENST00000508472 CEMIPQ8WUJ3 1361 aa20.77■□□□□ 0.92
DDR1-264ENST00000508472 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
DDR1-264ENST00000508472 SRP68Q9UHB9 627 aaKnown RBP20.77■□□□□ 0.92
DDR1-264ENST00000508472 COL15A1P39059 1388 aa20.76■□□□□ 0.91
DDR1-264ENST00000508472 A0A087WZG4 1122 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms