RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 MRC1P22897 1456 aa18.63■□□□□ 0.57
HMGCLL1-208ENST00000508459 THSD7AQ9UPZ6 1657 aa18.63■□□□□ 0.57
HMGCLL1-208ENST00000508459 MPRIPQ6WCQ1 1025 aa18.62■□□□□ 0.57
HMGCLL1-208ENST00000508459 SLC52A2Q9HAB3 445 aa18.62■□□□□ 0.57
HMGCLL1-208ENST00000508459 BCL9O00512 1426 aa18.62■□□□□ 0.57
HMGCLL1-208ENST00000508459 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
HMGCLL1-208ENST00000508459 FANCIQ9NVI1 1328 aa18.61■□□□□ 0.57
HMGCLL1-208ENST00000508459 HOXB7P09629 217 aa18.61■□□□□ 0.57
HMGCLL1-208ENST00000508459 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.61■□□□□ 0.57
HMGCLL1-208ENST00000508459 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
HMGCLL1-208ENST00000508459 BTBD11A6QL63 1104 aa18.6■□□□□ 0.57
HMGCLL1-208ENST00000508459 TTC5Q8N0Z6 440 aa18.6■□□□□ 0.57
HMGCLL1-208ENST00000508459 SHANK3Q9BYB0 1731 aa18.6■□□□□ 0.57
HMGCLL1-208ENST00000508459 GLI3P10071 1580 aa18.59■□□□□ 0.57
HMGCLL1-208ENST00000508459 RXRBP28702 533 aa18.59■□□□□ 0.57
HMGCLL1-208ENST00000508459 TMOD3Q9NYL9 352 aa18.59■□□□□ 0.57
HMGCLL1-208ENST00000508459 CDCA7LQ96GN5 454 aa18.58■□□□□ 0.56
HMGCLL1-208ENST00000508459 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
HMGCLL1-208ENST00000508459 DCTN1Q14203 1278 aa18.57■□□□□ 0.56
HMGCLL1-208ENST00000508459 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
HMGCLL1-208ENST00000508459 SIPA1L3O60292 1781 aaPredicted RBP18.57■□□□□ 0.56
HMGCLL1-208ENST00000508459 ALDH1L2Q3SY69 923 aa18.56■□□□□ 0.56
HMGCLL1-208ENST00000508459 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
HMGCLL1-208ENST00000508459 RCAN3Q9UKA8 241 aa18.56■□□□□ 0.56
HMGCLL1-208ENST00000508459 MS4A1P11836 297 aa18.55■□□□□ 0.56
HMGCLL1-208ENST00000508459 SEPT12Q8IYM1 358 aa18.55■□□□□ 0.56
HMGCLL1-208ENST00000508459 SMARCC1Q92922 1105 aaPredicted RBP18.55■□□□□ 0.56
HMGCLL1-208ENST00000508459 THUMPD2Q9BTF0 503 aaKnown RBP18.55■□□□□ 0.56
HMGCLL1-208ENST00000508459 NFATC2IPQ8NCF5 419 aa18.54■□□□□ 0.56
HMGCLL1-208ENST00000508459 TEX13AQ9BXU3 409 aaPredicted RBP18.54■□□□□ 0.56
HMGCLL1-208ENST00000508459 KDM3BQ7LBC6 1761 aa18.54■□□□□ 0.56
HMGCLL1-208ENST00000508459 TWISTNBQ3B726 338 aaPredicted RBP18.53■□□□□ 0.56
HMGCLL1-208ENST00000508459 ZNF790Q6PG37 636 aa18.53■□□□□ 0.56
HMGCLL1-208ENST00000508459 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
HMGCLL1-208ENST00000508459 FMNL2Q96PY5 1086 aa18.53■□□□□ 0.56
HMGCLL1-208ENST00000508459 SENP3-EIF4A1A0A087X0R7 540 aa18.52■□□□□ 0.56
HMGCLL1-208ENST00000508459 NEFLP07196 543 aa18.52■□□□□ 0.56
HMGCLL1-208ENST00000508459 VSIG10Q8N0Z9 540 aa18.52■□□□□ 0.56
HMGCLL1-208ENST00000508459 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
HMGCLL1-208ENST00000508459 CACNA1FO60840 1977 aa18.51■□□□□ 0.55
HMGCLL1-208ENST00000508459 KIF16BQ96L93 1317 aa18.51■□□□□ 0.55
HMGCLL1-208ENST00000508459 IPO8O15397 1037 aaKnown RBP18.51■□□□□ 0.55
HMGCLL1-208ENST00000508459 EXOSC9Q06265 439 aaKnown RBP18.51■□□□□ 0.55
HMGCLL1-208ENST00000508459 KRT27Q7Z3Y8 459 aa18.51■□□□□ 0.55
HMGCLL1-208ENST00000508459 MARCH10Q8NA82 808 aaPredicted RBP18.51■□□□□ 0.55
HMGCLL1-208ENST00000508459 STK31Q9BXU1 1019 aa18.51■□□□□ 0.55
HMGCLL1-208ENST00000508459 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
HMGCLL1-208ENST00000508459 CCDC30Q5VVM6 783 aa18.5■□□□□ 0.55
HMGCLL1-208ENST00000508459 BRPF1P55201 1214 aaPredicted RBP18.49■□□□□ 0.55
HMGCLL1-208ENST00000508459 SNRPA1P09661 255 aaKnown RBP18.48■□□□□ 0.55
HMGCLL1-208ENST00000508459 EIF4A1P60842 406 aaKnown RBP18.48■□□□□ 0.55
HMGCLL1-208ENST00000508459 ITGB4P16144 1822 aa18.48■□□□□ 0.55
HMGCLL1-208ENST00000508459 DOT1LQ8TEK3 1739 aa18.48■□□□□ 0.55
HMGCLL1-208ENST00000508459 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
HMGCLL1-208ENST00000508459 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
HMGCLL1-208ENST00000508459 KAT6BQ8WYB5 2073 aa18.46■□□□□ 0.55
HMGCLL1-208ENST00000508459 PAPPAQ13219 1627 aa18.46■□□□□ 0.55
HMGCLL1-208ENST00000508459 HEG1Q9ULI3 1381 aa18.45■□□□□ 0.54
HMGCLL1-208ENST00000508459 NHSQ6T4R5 1651 aa18.45■□□□□ 0.54
HMGCLL1-208ENST00000508459 VAMP4O75379 141 aa18.45■□□□□ 0.54
HMGCLL1-208ENST00000508459 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
HMGCLL1-208ENST00000508459 PRIM1P49642 420 aaKnown RBP18.45■□□□□ 0.54
HMGCLL1-208ENST00000508459 RARSP54136 660 aaKnown RBP18.45■□□□□ 0.54
HMGCLL1-208ENST00000508459 TOGARAM1Q9Y4F4 1720 aa18.45■□□□□ 0.54
HMGCLL1-208ENST00000508459 UBR2Q8IWV8 1755 aa18.45■□□□□ 0.54
HMGCLL1-208ENST00000508459 PIGBQ92521 554 aa18.44■□□□□ 0.54
HMGCLL1-208ENST00000508459 ARHGAP45Q92619 1136 aa18.44■□□□□ 0.54
HMGCLL1-208ENST00000508459 BCL11BQ9C0K0 894 aaPredicted RBP18.44■□□□□ 0.54
HMGCLL1-208ENST00000508459 CHMP4BQ9H444 224 aaKnown RBP18.44■□□□□ 0.54
HMGCLL1-208ENST00000508459 SMC4Q9NTJ3 1288 aa18.44■□□□□ 0.54
HMGCLL1-208ENST00000508459 GIGYF1O75420 1035 aaPredicted RBP18.43■□□□□ 0.54
HMGCLL1-208ENST00000508459 STARD3NLO95772 234 aa18.43■□□□□ 0.54
HMGCLL1-208ENST00000508459 HDGFL1Q5TGJ6 251 aa18.43■□□□□ 0.54
HMGCLL1-208ENST00000508459 ERICH6BQ5W0A0 696 aa18.43■□□□□ 0.54
HMGCLL1-208ENST00000508459 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
HMGCLL1-208ENST00000508459 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
HMGCLL1-208ENST00000508459 ZNF831Q5JPB2 1677 aa18.43■□□□□ 0.54
HMGCLL1-208ENST00000508459 C8orf58Q8NAV2 365 aa18.42■□□□□ 0.54
HMGCLL1-208ENST00000508459 PTPRCP08575 1304 aa18.42■□□□□ 0.54
HMGCLL1-208ENST00000508459 AAMPQ13685 434 aa18.41■□□□□ 0.54
HMGCLL1-208ENST00000508459 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
HMGCLL1-208ENST00000508459 HYPKQ9NX55 129 aa18.41■□□□□ 0.54
HMGCLL1-208ENST00000508459 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
HMGCLL1-208ENST00000508459 LAMB4A4D0S4 1761 aa18.4■□□□□ 0.54
HMGCLL1-208ENST00000508459 PDE3AQ14432 1141 aa18.4■□□□□ 0.54
HMGCLL1-208ENST00000508459 CICQ96RK0 1608 aaPredicted RBP18.39■□□□□ 0.53
HMGCLL1-208ENST00000508459 RRP1P56182 461 aaKnown RBP18.39■□□□□ 0.53
HMGCLL1-208ENST00000508459 ZKSCAN2Q63HK3 967 aa18.39■□□□□ 0.53
HMGCLL1-208ENST00000508459 ZNF496Q96IT1 587 aaPredicted RBP18.39■□□□□ 0.53
HMGCLL1-208ENST00000508459 API5Q9BZZ5 524 aaKnown RBP18.39■□□□□ 0.53
HMGCLL1-208ENST00000508459 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.53
HMGCLL1-208ENST00000508459 SBF2Q86WG5 1849 aa18.38■□□□□ 0.53
HMGCLL1-208ENST00000508459 DDX58O95786 925 aaKnown RBP18.38■□□□□ 0.53
HMGCLL1-208ENST00000508459 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
HMGCLL1-208ENST00000508459 ATG3Q9NT62 314 aa18.38■□□□□ 0.53
HMGCLL1-208ENST00000508459 RGS17Q9UGC6 210 aaPredicted RBP18.38■□□□□ 0.53
HMGCLL1-208ENST00000508459 SUPT16HQ9Y5B9 1047 aaKnown RBP18.38■□□□□ 0.53
HMGCLL1-208ENST00000508459 RGS12O14924 1447 aa18.38■□□□□ 0.53
HMGCLL1-208ENST00000508459 ELL2O00472 640 aaPredicted RBP18.37■□□□□ 0.53
HMGCLL1-208ENST00000508459 TSPYL6Q8N831 410 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms