RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ANO2Q9NQ90 1003 aa9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 P4HBP07237 508 aaKnown RBP9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 ZSCAN29Q8IWY8 852 aaPredicted RBP9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 NLRP7Q8WX94 980 aa9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 AS3MTQ9HBK9 375 aa9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 IGF1RP08069 1367 aa9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 DYTNA2CJ06 578 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 HIP1RO75146 1068 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 SF3B2Q13435 895 aaKnown RBP9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 SIM2Q14190 667 aaPredicted RBP9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 QPCTQ16769 361 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 LONRF1Q17RB8 773 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 NBPF9Q3BBW0 867 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 C1QTNF12Q5T7M4 302 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 ARNT2Q9HBZ2 717 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 INTUQ9ULD6 942 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 INPP5FQ9Y2H2 1132 aa9.36□□□□□ -0.91
PDGFRA-206ENST00000508170 CAND2O75155 1236 aa9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 APPP05067 770 aa9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 NOL7Q9UMY1 257 aaKnown RBP9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 TBX3O15119 743 aa9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 BPNT1O95861 308 aa9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 KRT18P05783 430 aaKnown RBP9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 ZNF76P36508 570 aa9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 NEXNQ0ZGT2 675 aa9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 EGFL6Q8IUX8 553 aa9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 TRIM44Q96DX7 344 aaPredicted RBP9.35□□□□□ -0.91
PDGFRA-206ENST00000508170 CT47B1P0C2W7 299 aaPredicted RBP9.34□□□□□ -0.91
PDGFRA-206ENST00000508170 PDE3BQ13370 1112 aa9.34□□□□□ -0.91
PDGFRA-206ENST00000508170 TBC1D10BQ4KMP7 808 aaPredicted RBP9.34□□□□□ -0.91
PDGFRA-206ENST00000508170 CHPFQ8IZ52 775 aa9.34□□□□□ -0.91
PDGFRA-206ENST00000508170 RSPH1Q8WYR4 309 aa9.34□□□□□ -0.91
PDGFRA-206ENST00000508170 MYO15BQ96JP2 1530 aa9.34□□□□□ -0.91
PDGFRA-206ENST00000508170 FGRP09769 529 aa9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 TGFB3P10600 412 aa9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 PPP4R4Q6NUP7 873 aa9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 KANK3Q6NY19 840 aa9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 GLYCTKQ8IVS8 523 aa9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 MYCBPQ99417 103 aaPredicted RBP9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 HMX1Q9NP08 348 aaPredicted RBP9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 AKAP2Q9Y2D5 859 aa9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 CRTC2Q53ET0 693 aaPredicted RBP9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 CWC25Q9NXE8 425 aaPredicted RBP9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 DIS3Q9Y2L1 958 aaKnown RBP9.33□□□□□ -0.92
PDGFRA-206ENST00000508170 KAT6BQ8WYB5 2073 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 RRM1P23921 792 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 NOS2P35228 1153 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 ZSCAN30Q86W11 494 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 RGL4Q8IZJ4 473 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 ENAMQ9NRM1 1142 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 HOMER2Q9NSB8 354 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 EGFL7Q9UHF1 273 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 RNASEH2AO75792 299 aaKnown RBP9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 CDC27P30260 824 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 TRAPPC10P48553 1259 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 TMEM95Q3KNT9 176 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 C12orf49Q9H741 205 aa9.32□□□□□ -0.92
PDGFRA-206ENST00000508170 ICMTO60725 284 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 SERINC3Q13530 473 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 DIXDC1Q155Q3 683 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 ECM1Q16610 540 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 PPCSQ9HAB8 311 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 MRS2Q9HD23 443 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 RNF19AQ9NV58 838 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 SYNPO2Q9UMS6 1093 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 CCDC163A0A0D9SF12 145 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 SOX11P35716 441 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 PPP2R5AQ15172 486 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 ALDH1L2Q3SY69 923 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 INO80DQ53TQ3 878 aaPredicted RBP9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 CCDC93Q567U6 631 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 MPNDQ8N594 471 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 SLKQ9H2G2 1235 aaPredicted RBP9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 CABP2Q9NPB3 220 aa9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 ISY1Q9ULR0 285 aaKnown RBP9.31□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L15C9J2P7 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L10C9JJH3 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L13C9JLJ4 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L12C9JPN9 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L11C9JVI0 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L21D6R901 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L18D6R9N7 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L22D6RA61 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L17D6RBQ6 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L19D6RCP7 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L20D6RJB6 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 USP17L24Q0WX57 530 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 PGBD3Q8N328 593 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 AKT1S1Q96B36 256 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 RETREG1Q9H6L5 497 aa9.3□□□□□ -0.92
PDGFRA-206ENST00000508170 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
PDGFRA-206ENST00000508170 TSPAN6O43657 245 aa9.29□□□□□ -0.92
PDGFRA-206ENST00000508170 MYL1P05976 194 aa9.29□□□□□ -0.92
PDGFRA-206ENST00000508170 CCDC89Q8N998 374 aa9.29□□□□□ -0.92
PDGFRA-206ENST00000508170 TMEM238LA0A1B0GVL6 79 aa9.29□□□□□ -0.92
PDGFRA-206ENST00000508170 PRMT3O60678 531 aa9.29□□□□□ -0.92
PDGFRA-206ENST00000508170 ANKRD23Q86SG2 305 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms