RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 PELP1Q8IZL8 1130 aaKnown RBP20.77■□□□□ 0.91
SPSB4-203ENST00000508126 TRIM27P14373 513 aa20.76■□□□□ 0.91
SPSB4-203ENST00000508126 DZIP1LQ8IYY4 767 aaKnown RBP20.76■□□□□ 0.91
SPSB4-203ENST00000508126 NRAPQ86VF7 1730 aa20.75■□□□□ 0.91
SPSB4-203ENST00000508126 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
SPSB4-203ENST00000508126 MRC1P22897 1456 aa20.75■□□□□ 0.91
SPSB4-203ENST00000508126 SIPA1L3O60292 1781 aaPredicted RBP20.75■□□□□ 0.91
SPSB4-203ENST00000508126 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
SPSB4-203ENST00000508126 SLC52A2Q9HAB3 445 aa20.74■□□□□ 0.91
SPSB4-203ENST00000508126 COG6Q9Y2V7 657 aa20.74■□□□□ 0.91
SPSB4-203ENST00000508126 SPATA31A6Q5VVP1 1343 aa20.74■□□□□ 0.91
SPSB4-203ENST00000508126 ARHGAP45Q92619 1136 aa20.74■□□□□ 0.91
SPSB4-203ENST00000508126 SLIT2O94813 1529 aa20.74■□□□□ 0.91
SPSB4-203ENST00000508126 DISP2A7MBM2 1401 aa20.73■□□□□ 0.91
SPSB4-203ENST00000508126 TCERG1O14776 1098 aaKnown RBP20.73■□□□□ 0.91
SPSB4-203ENST00000508126 RLBP1P12271 317 aa20.73■□□□□ 0.91
SPSB4-203ENST00000508126 TNNQ9UQP3 1299 aa20.73■□□□□ 0.91
SPSB4-203ENST00000508126 EIF4A1P60842 406 aaKnown RBP20.72■□□□□ 0.91
SPSB4-203ENST00000508126 CHMP4AQ9BY43 222 aa20.72■□□□□ 0.91
SPSB4-203ENST00000508126 HOXB7P09629 217 aa20.72■□□□□ 0.91
SPSB4-203ENST00000508126 AAMPQ13685 434 aa20.72■□□□□ 0.91
SPSB4-203ENST00000508126 CCDC30Q5VVM6 783 aa20.71■□□□□ 0.91
SPSB4-203ENST00000508126 STK31Q9BXU1 1019 aa20.71■□□□□ 0.91
SPSB4-203ENST00000508126 SHANK3Q9BYB0 1731 aa20.71■□□□□ 0.91
SPSB4-203ENST00000508126 MVPQ14764 893 aaKnown RBP20.7■□□□□ 0.9
SPSB4-203ENST00000508126 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
SPSB4-203ENST00000508126 API5Q9BZZ5 524 aaKnown RBP20.7■□□□□ 0.9
SPSB4-203ENST00000508126 DDX54Q8TDD1 881 aaKnown RBP20.69■□□□□ 0.9
SPSB4-203ENST00000508126 CDCA7Q9BWT1 371 aaPredicted RBP20.69■□□□□ 0.9
SPSB4-203ENST00000508126 THRAP3Q9Y2W1 955 aaKnown RBP20.69■□□□□ 0.9
SPSB4-203ENST00000508126 WNK3Q9BYP7 1800 aa20.69■□□□□ 0.9
SPSB4-203ENST00000508126 SPATA31A1Q5TZJ5 1347 aa20.69■□□□□ 0.9
SPSB4-203ENST00000508126 CABP4P57796 275 aa20.69■□□□□ 0.9
SPSB4-203ENST00000508126 NFATC2IPQ8NCF5 419 aa20.69■□□□□ 0.9
SPSB4-203ENST00000508126 KCNQ3O43525 872 aa20.68■□□□□ 0.9
SPSB4-203ENST00000508126 HSPA1LP34931 641 aa20.68■□□□□ 0.9
SPSB4-203ENST00000508126 PTPRCP08575 1304 aa20.67■□□□□ 0.9
SPSB4-203ENST00000508126 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
SPSB4-203ENST00000508126 HDGFL1Q5TGJ6 251 aa20.67■□□□□ 0.9
SPSB4-203ENST00000508126 ITPRIPQ8IWB1 547 aa20.67■□□□□ 0.9
SPSB4-203ENST00000508126 NGLY1Q96IV0 654 aa20.67■□□□□ 0.9
SPSB4-203ENST00000508126 C8orf37Q96NL8 207 aa20.67■□□□□ 0.9
SPSB4-203ENST00000508126 ERVV-2B6SEH9 535 aa20.67■□□□□ 0.9
SPSB4-203ENST00000508126 ZNF790Q6PG37 636 aa20.67■□□□□ 0.9
SPSB4-203ENST00000508126 DDX19BQ9UMR2 479 aa20.67■□□□□ 0.9
SPSB4-203ENST00000508126 SPATA31A5Q5VU36 1347 aa20.66■□□□□ 0.9
SPSB4-203ENST00000508126 SPATA31A7Q8IWB4 1347 aa20.66■□□□□ 0.9
SPSB4-203ENST00000508126 UNC5CLQ8IV45 518 aa20.66■□□□□ 0.9
SPSB4-203ENST00000508126 TNS2Q63HR2 1409 aa20.66■□□□□ 0.9
SPSB4-203ENST00000508126 ABCC4O15439 1325 aa20.65■□□□□ 0.9
SPSB4-203ENST00000508126 TMEM57Q8N5G2 664 aa20.65■□□□□ 0.9
SPSB4-203ENST00000508126 CCDC9Q9Y3X0 531 aaKnown RBP20.65■□□□□ 0.9
SPSB4-203ENST00000508126 LRP6O75581 1613 aa20.65■□□□□ 0.9
SPSB4-203ENST00000508126 HEG1Q9ULI3 1381 aa20.65■□□□□ 0.9
SPSB4-203ENST00000508126 TTC5Q8N0Z6 440 aa20.64■□□□□ 0.9
SPSB4-203ENST00000508126 EXOC5O00471 708 aa20.64■□□□□ 0.89
SPSB4-203ENST00000508126 NECTIN2Q92692 538 aa20.63■□□□□ 0.89
SPSB4-203ENST00000508126 GIGYF1O75420 1035 aaPredicted RBP20.62■□□□□ 0.89
SPSB4-203ENST00000508126 SLC39A6Q13433 755 aa20.62■□□□□ 0.89
SPSB4-203ENST00000508126 FNBP4Q8N3X1 1017 aaPredicted RBP20.62■□□□□ 0.89
SPSB4-203ENST00000508126 CHMP4BQ9H444 224 aaKnown RBP20.62■□□□□ 0.89
SPSB4-203ENST00000508126 CACNA1FO60840 1977 aa20.62■□□□□ 0.89
SPSB4-203ENST00000508126 EIF2S2P20042 333 aaKnown RBP20.62■□□□□ 0.89
SPSB4-203ENST00000508126 BARGINQ6ZT62 677 aa20.62■□□□□ 0.89
SPSB4-203ENST00000508126 BCL9LQ86UU0 1499 aa20.61■□□□□ 0.89
SPSB4-203ENST00000508126 VPS72Q15906 364 aa20.61■□□□□ 0.89
SPSB4-203ENST00000508126 MEX3CQ5U5Q3 659 aaKnown RBP20.61■□□□□ 0.89
SPSB4-203ENST00000508126 RGS12O14924 1447 aa20.6■□□□□ 0.89
SPSB4-203ENST00000508126 FLIIQ13045 1269 aa20.59■□□□□ 0.89
SPSB4-203ENST00000508126 TOGARAM1Q9Y4F4 1720 aa20.59■□□□□ 0.89
SPSB4-203ENST00000508126 DDB1Q16531 1140 aa20.59■□□□□ 0.89
SPSB4-203ENST00000508126 G2E3Q7L622 706 aa20.59■□□□□ 0.89
SPSB4-203ENST00000508126 FMNL2Q96PY5 1086 aa20.59■□□□□ 0.89
SPSB4-203ENST00000508126 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.58■□□□□ 0.89
SPSB4-203ENST00000508126 ZNF496Q96IT1 587 aaPredicted RBP20.58■□□□□ 0.89
SPSB4-203ENST00000508126 TMOD3Q9NYL9 352 aa20.58■□□□□ 0.89
SPSB4-203ENST00000508126 CENPQQ7L2Z9 268 aaPredicted RBP20.57■□□□□ 0.88
SPSB4-203ENST00000508126 CHPF2Q9P2E5 772 aa20.57■□□□□ 0.88
SPSB4-203ENST00000508126 DBF4Q9UBU7 674 aaPredicted RBP20.57■□□□□ 0.88
SPSB4-203ENST00000508126 USP21Q9UK80 565 aa20.57■□□□□ 0.88
SPSB4-203ENST00000508126 PAPPAQ13219 1627 aa20.57■□□□□ 0.88
SPSB4-203ENST00000508126 FKBP5Q13451 457 aaPredicted RBP20.57■□□□□ 0.88
SPSB4-203ENST00000508126 SNRPA1P09661 255 aaKnown RBP20.56■□□□□ 0.88
SPSB4-203ENST00000508126 INTS3Q68E01 1043 aaKnown RBP20.56■□□□□ 0.88
SPSB4-203ENST00000508126 KDM2BQ8NHM5 1336 aa20.56■□□□□ 0.88
SPSB4-203ENST00000508126 ZBTB40Q9NUA8 1239 aa20.54■□□□□ 0.88
SPSB4-203ENST00000508126 C5P01031 1676 aa20.54■□□□□ 0.88
SPSB4-203ENST00000508126 PRAMEF22A3QJZ6 481 aa20.54■□□□□ 0.88
SPSB4-203ENST00000508126 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
SPSB4-203ENST00000508126 CCT4P50991 539 aaKnown RBP20.53■□□□□ 0.88
SPSB4-203ENST00000508126 ZBTB7BO15156 539 aaPredicted RBP20.52■□□□□ 0.88
SPSB4-203ENST00000508126 FAM98CQ17RN3 349 aaKnown RBP20.52■□□□□ 0.88
SPSB4-203ENST00000508126 HYPKQ9NX55 129 aa20.52■□□□□ 0.88
SPSB4-203ENST00000508126 PCDHB15Q9Y5E8 787 aa20.52■□□□□ 0.88
SPSB4-203ENST00000508126 PXDNLA1KZ92 1463 aa20.51■□□□□ 0.87
SPSB4-203ENST00000508126 GLI3P10071 1580 aa20.51■□□□□ 0.87
SPSB4-203ENST00000508126 KCPQ6ZWJ8 1503 aa20.51■□□□□ 0.87
SPSB4-203ENST00000508126 PHAXQ9H814 394 aaKnown RBP20.51■□□□□ 0.87
SPSB4-203ENST00000508126 LAMB4A4D0S4 1761 aa20.51■□□□□ 0.87
SPSB4-203ENST00000508126 F6X3S4 739 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms