RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 KDRP35968 1356 aa19.16■□□□□ 0.66
TSPAN17-206ENST00000507471 KIF13BQ9NQT8 1826 aa19.16■□□□□ 0.66
TSPAN17-206ENST00000507471 ZNF831Q5JPB2 1677 aa19.15■□□□□ 0.66
TSPAN17-206ENST00000507471 PLEKHG2Q9H7P9 1386 aa19.14■□□□□ 0.65
TSPAN17-206ENST00000507471 PXDNLA1KZ92 1463 aa19.14■□□□□ 0.65
TSPAN17-206ENST00000507471 MMP10P09238 476 aa19.13■□□□□ 0.65
TSPAN17-206ENST00000507471 TNNT2P45379 298 aaPredicted RBP19.13■□□□□ 0.65
TSPAN17-206ENST00000507471 COL5A3P25940 1745 aaPredicted RBP19.13■□□□□ 0.65
TSPAN17-206ENST00000507471 N4BP2Q86UW6 1770 aaPredicted RBP19.12■□□□□ 0.65
TSPAN17-206ENST00000507471 HSPA6P17066 643 aa19.11■□□□□ 0.65
TSPAN17-206ENST00000507471 TRIM26Q12899 539 aaPredicted RBP19.11■□□□□ 0.65
TSPAN17-206ENST00000507471 SLC4A9Q96Q91 983 aa19.11■□□□□ 0.65
TSPAN17-206ENST00000507471 IFFO2Q5TF58 517 aa19.1■□□□□ 0.65
TSPAN17-206ENST00000507471 POLR3GLQ9BT43 218 aa19.1■□□□□ 0.65
TSPAN17-206ENST00000507471 TIMELESSQ9UNS1 1208 aa19.1■□□□□ 0.65
TSPAN17-206ENST00000507471 RTCBQ9Y3I0 505 aaKnown RBP19.1■□□□□ 0.65
TSPAN17-206ENST00000507471 C10orf71Q711Q0 1435 aa19.09■□□□□ 0.65
TSPAN17-206ENST00000507471 ERVV-2B6SEH9 535 aa19.09■□□□□ 0.65
TSPAN17-206ENST00000507471 KIF3CO14782 793 aa19.09■□□□□ 0.65
TSPAN17-206ENST00000507471 TRAPPC3LQ5T215 181 aa19.09■□□□□ 0.65
TSPAN17-206ENST00000507471 RBM42Q9BTD8 480 aaKnown RBP19.09■□□□□ 0.65
TSPAN17-206ENST00000507471 CEP350Q5VT06 3117 aa19.09■□□□□ 0.65
TSPAN17-206ENST00000507471 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.65
TSPAN17-206ENST00000507471 C4AP0C0L4 1744 aa19.08■□□□□ 0.65
TSPAN17-206ENST00000507471 TGFB2P61812 414 aa19.08■□□□□ 0.64
TSPAN17-206ENST00000507471 NLGN1Q8N2Q7 840 aa19.08■□□□□ 0.64
TSPAN17-206ENST00000507471 DCAF5Q96JK2 942 aa19.08■□□□□ 0.64
TSPAN17-206ENST00000507471 RC3H1Q5TC82 1133 aaKnown RBP19.07■□□□□ 0.64
TSPAN17-206ENST00000507471 ARHGEF1Q92888 912 aaKnown RBP19.07■□□□□ 0.64
TSPAN17-206ENST00000507471 CNTNAP4Q9C0A0 1308 aa19.06■□□□□ 0.64
TSPAN17-206ENST00000507471 A0A0G2JLW4 131 aa19.06■□□□□ 0.64
TSPAN17-206ENST00000507471 HSP90AB1P08238 724 aaKnown RBP19.06■□□□□ 0.64
TSPAN17-206ENST00000507471 GYS1P13807 737 aa19.06■□□□□ 0.64
TSPAN17-206ENST00000507471 ADRA2BP18089 450 aa19.06■□□□□ 0.64
TSPAN17-206ENST00000507471 BCS1LQ9Y276 419 aa19.06■□□□□ 0.64
TSPAN17-206ENST00000507471 BRCA1P38398 1863 aaKnown RBP19.05■□□□□ 0.64
TSPAN17-206ENST00000507471 PLEKHO1Q53GL0 409 aaPredicted RBP19.05■□□□□ 0.64
TSPAN17-206ENST00000507471 RPS6KA4O75676 772 aa19.04■□□□□ 0.64
TSPAN17-206ENST00000507471 ZNF530Q6P9A1 599 aaPredicted RBP19.04■□□□□ 0.64
TSPAN17-206ENST00000507471 MYH14Q7Z406 1995 aaKnown RBP19.03■□□□□ 0.64
TSPAN17-206ENST00000507471 RFC4P35249 363 aa19.03■□□□□ 0.64
TSPAN17-206ENST00000507471 CABP4P57796 275 aa19.03■□□□□ 0.64
TSPAN17-206ENST00000507471 AMOTQ4VCS5 1084 aa19.03■□□□□ 0.64
TSPAN17-206ENST00000507471 CCDC87Q9NVE4 849 aa19.03■□□□□ 0.64
TSPAN17-206ENST00000507471 DPEP1P16444 411 aa19.02■□□□□ 0.64
TSPAN17-206ENST00000507471 TJP1Q07157 1748 aa19.01■□□□□ 0.63
TSPAN17-206ENST00000507471 AEBP1Q8IUX7 1158 aa19.01■□□□□ 0.63
TSPAN17-206ENST00000507471 PANK3Q9H999 370 aa19.01■□□□□ 0.63
TSPAN17-206ENST00000507471 PARP3Q9Y6F1 533 aa19.01■□□□□ 0.63
TSPAN17-206ENST00000507471 PTCD1O75127 700 aaKnown RBP19■□□□□ 0.63
TSPAN17-206ENST00000507471 MTHFSP49914 203 aa19■□□□□ 0.63
TSPAN17-206ENST00000507471 ARHGAP27Q6ZUM4 889 aa19■□□□□ 0.63
TSPAN17-206ENST00000507471 FCHSD2O94868 740 aa18.99■□□□□ 0.63
TSPAN17-206ENST00000507471 KCNA3P22001 575 aa18.99■□□□□ 0.63
TSPAN17-206ENST00000507471 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
TSPAN17-206ENST00000507471 C1orf141Q5JVX7 400 aa18.99■□□□□ 0.63
TSPAN17-206ENST00000507471 ARFGEF1Q9Y6D6 1849 aa18.99■□□□□ 0.63
TSPAN17-206ENST00000507471 CLSPNQ9HAW4 1339 aa18.99■□□□□ 0.63
TSPAN17-206ENST00000507471 HSPA5P11021 654 aaKnown RBP18.98■□□□□ 0.63
TSPAN17-206ENST00000507471 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.63
TSPAN17-206ENST00000507471 NFATC2IPQ8NCF5 419 aa18.98■□□□□ 0.63
TSPAN17-206ENST00000507471 SCN11AQ9UI33 1791 aa18.97■□□□□ 0.63
TSPAN17-206ENST00000507471 TOMM70O94826 608 aa18.97■□□□□ 0.63
TSPAN17-206ENST00000507471 SRP68Q9UHB9 627 aaKnown RBP18.97■□□□□ 0.63
TSPAN17-206ENST00000507471 ADAMTS7Q9UKP4 1686 aa18.97■□□□□ 0.63
TSPAN17-206ENST00000507471 USP42Q9H9J4 1324 aaKnown RBP18.97■□□□□ 0.63
TSPAN17-206ENST00000507471 SULT6B1Q6IMI4 303 aa18.96■□□□□ 0.63
TSPAN17-206ENST00000507471 MORC1Q86VD1 984 aa18.96■□□□□ 0.63
TSPAN17-206ENST00000507471 NMRK2Q9NPI5 230 aa18.96■□□□□ 0.63
TSPAN17-206ENST00000507471 APLP1P51693 650 aa18.95■□□□□ 0.62
TSPAN17-206ENST00000507471 DDR1Q08345 913 aa18.95■□□□□ 0.62
TSPAN17-206ENST00000507471 FKBP8Q14318 412 aa18.95■□□□□ 0.62
TSPAN17-206ENST00000507471 PIM2Q9P1W9 311 aa18.94■□□□□ 0.62
TSPAN17-206ENST00000507471 IL13P35225 146 aa18.93■□□□□ 0.62
TSPAN17-206ENST00000507471 C9orf131Q5VYM1 1079 aa18.93■□□□□ 0.62
TSPAN17-206ENST00000507471 INTS5Q6P9B9 1019 aaKnown RBP18.93■□□□□ 0.62
TSPAN17-206ENST00000507471 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
TSPAN17-206ENST00000507471 POLRMTO00411 1230 aaKnown RBP18.91■□□□□ 0.62
TSPAN17-206ENST00000507471 MRC1P22897 1456 aa18.9■□□□□ 0.62
TSPAN17-206ENST00000507471 TM4SF1P30408 202 aa18.9■□□□□ 0.62
TSPAN17-206ENST00000507471 CHRNA5P30532 468 aa18.9■□□□□ 0.62
TSPAN17-206ENST00000507471 DALRD3Q5D0E6 543 aaKnown RBP18.9■□□□□ 0.62
TSPAN17-206ENST00000507471 AKAP4Q5JQC9 854 aa18.9■□□□□ 0.62
TSPAN17-206ENST00000507471 DNAJC5GQ8N7S2 189 aa18.9■□□□□ 0.62
TSPAN17-206ENST00000507471 WDR90Q96KV7 1748 aa18.9■□□□□ 0.62
TSPAN17-206ENST00000507471 KCPQ6ZWJ8 1503 aa18.9■□□□□ 0.62
TSPAN17-206ENST00000507471 USPL1Q5W0Q7 1092 aa18.89■□□□□ 0.61
TSPAN17-206ENST00000507471 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
TSPAN17-206ENST00000507471 SLC52A2Q9HAB3 445 aa18.89■□□□□ 0.61
TSPAN17-206ENST00000507471 KNSTRNQ9Y448 316 aa18.89■□□□□ 0.61
TSPAN17-206ENST00000507471 VIRMAQ69YN4 1812 aaKnown RBP18.88■□□□□ 0.61
TSPAN17-206ENST00000507471 RBM46Q8TBY0 533 aaKnown RBP18.88■□□□□ 0.61
TSPAN17-206ENST00000507471 LGR6Q9HBX8 967 aa18.88■□□□□ 0.61
TSPAN17-206ENST00000507471 RNF181Q9P0P0 153 aa18.88■□□□□ 0.61
TSPAN17-206ENST00000507471 SOS1Q07889 1333 aaPredicted RBP18.88■□□□□ 0.61
TSPAN17-206ENST00000507471 ZPR1O75312 459 aa18.87■□□□□ 0.61
TSPAN17-206ENST00000507471 NRXN2Q9P2S2 1712 aa18.87■□□□□ 0.61
TSPAN17-206ENST00000507471 SBF1O95248 1867 aa18.86■□□□□ 0.61
TSPAN17-206ENST00000507471 AFDNP55196 1824 aaKnown RBP18.86■□□□□ 0.61
TSPAN17-206ENST00000507471 TNRC6CQ9HCJ0 1690 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms