RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
SNF8-205ENST00000507302 EYA1Q99502 592 aa22.95■■□□□ 1.26
SNF8-205ENST00000507302 C10orf71Q711Q0 1435 aa22.94■■□□□ 1.26
SNF8-205ENST00000507302 PHKG2P15735 406 aa22.94■■□□□ 1.26
SNF8-205ENST00000507302 TMOD3Q9NYL9 352 aa22.94■■□□□ 1.26
SNF8-205ENST00000507302 GNPATO15228 680 aa22.93■■□□□ 1.26
SNF8-205ENST00000507302 TGFB2P61812 414 aa22.93■■□□□ 1.26
SNF8-205ENST00000507302 ATG3Q9NT62 314 aa22.93■■□□□ 1.26
SNF8-205ENST00000507302 ATP6V1AP38606 617 aa22.92■■□□□ 1.26
SNF8-205ENST00000507302 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
SNF8-205ENST00000507302 C4AP0C0L4 1744 aa22.91■■□□□ 1.26
SNF8-205ENST00000507302 MMP10P09238 476 aa22.91■■□□□ 1.26
SNF8-205ENST00000507302 ARFGEF1Q9Y6D6 1849 aa22.91■■□□□ 1.26
SNF8-205ENST00000507302 DNAJC5GQ8N7S2 189 aa22.9■■□□□ 1.26
SNF8-205ENST00000507302 SLC4A9Q96Q91 983 aa22.9■■□□□ 1.26
SNF8-205ENST00000507302 WWC3Q9ULE0 1092 aa22.9■■□□□ 1.26
SNF8-205ENST00000507302 RC3H1Q5TC82 1133 aaKnown RBP22.89■■□□□ 1.25
SNF8-205ENST00000507302 POLKQ9UBT6 870 aa22.89■■□□□ 1.25
SNF8-205ENST00000507302 MYH14Q7Z406 1995 aaKnown RBP22.89■■□□□ 1.25
SNF8-205ENST00000507302 APLP1P51693 650 aa22.88■■□□□ 1.25
SNF8-205ENST00000507302 NLGN1Q8N2Q7 840 aa22.88■■□□□ 1.25
SNF8-205ENST00000507302 TOMM70O94826 608 aa22.87■■□□□ 1.25
SNF8-205ENST00000507302 ADRA2BP18089 450 aa22.87■■□□□ 1.25
SNF8-205ENST00000507302 ERVV-2B6SEH9 535 aa22.86■■□□□ 1.25
SNF8-205ENST00000507302 TRAPPC3LQ5T215 181 aa22.86■■□□□ 1.25
SNF8-205ENST00000507302 RTCBQ9Y3I0 505 aaKnown RBP22.86■■□□□ 1.25
SNF8-205ENST00000507302 CNTNAP4Q9C0A0 1308 aa22.85■■□□□ 1.25
SNF8-205ENST00000507302 PPM1GO15355 546 aaPredicted RBP22.84■■□□□ 1.25
SNF8-205ENST00000507302 GYS1P13807 737 aa22.84■■□□□ 1.25
SNF8-205ENST00000507302 ARHGEF1Q92888 912 aaKnown RBP22.84■■□□□ 1.25
SNF8-205ENST00000507302 WDR90Q96KV7 1748 aa22.83■■□□□ 1.25
SNF8-205ENST00000507302 A0A0G2JLW4 131 aa22.83■■□□□ 1.25
SNF8-205ENST00000507302 KCNA3P22001 575 aa22.83■■□□□ 1.25
SNF8-205ENST00000507302 EIF4A2Q14240 407 aaKnown RBP22.83■■□□□ 1.25
SNF8-205ENST00000507302 RPS6KA4O75676 772 aa22.82■■□□□ 1.24
SNF8-205ENST00000507302 BCS1LQ9Y276 419 aa22.82■■□□□ 1.24
SNF8-205ENST00000507302 DPEP1P16444 411 aa22.81■■□□□ 1.24
SNF8-205ENST00000507302 DCAF5Q96JK2 942 aa22.81■■□□□ 1.24
SNF8-205ENST00000507302 KDM6AO15550 1401 aaPredicted RBP22.81■■□□□ 1.24
SNF8-205ENST00000507302 ADAMTS7Q9UKP4 1686 aa22.81■■□□□ 1.24
SNF8-205ENST00000507302 CCDC87Q9NVE4 849 aa22.8■■□□□ 1.24
SNF8-205ENST00000507302 HSP90AB1P08238 724 aaKnown RBP22.78■■□□□ 1.24
SNF8-205ENST00000507302 TJP1Q07157 1748 aa22.78■■□□□ 1.24
SNF8-205ENST00000507302 RBM46Q8TBY0 533 aaKnown RBP22.78■■□□□ 1.24
SNF8-205ENST00000507302 NMRK2Q9NPI5 230 aa22.78■■□□□ 1.24
SNF8-205ENST00000507302 SBF1O95248 1867 aa22.77■■□□□ 1.24
SNF8-205ENST00000507302 ARHGAP27Q6ZUM4 889 aa22.77■■□□□ 1.24
SNF8-205ENST00000507302 FCHSD2O94868 740 aa22.75■■□□□ 1.23
SNF8-205ENST00000507302 RFC4P35249 363 aa22.75■■□□□ 1.23
SNF8-205ENST00000507302 RBM42Q9BTD8 480 aaKnown RBP22.75■■□□□ 1.23
SNF8-205ENST00000507302 PARP3Q9Y6F1 533 aa22.75■■□□□ 1.23
SNF8-205ENST00000507302 TNRC6CQ9HCJ0 1690 aaKnown RBP22.74■■□□□ 1.23
SNF8-205ENST00000507302 C9orf131Q5VYM1 1079 aa22.73■■□□□ 1.23
SNF8-205ENST00000507302 SCN11AQ9UI33 1791 aa22.73■■□□□ 1.23
SNF8-205ENST00000507302 FSTL1Q12841 308 aa22.72■■□□□ 1.23
SNF8-205ENST00000507302 AMOTQ4VCS5 1084 aa22.72■■□□□ 1.23
SNF8-205ENST00000507302 PLEKHO1Q53GL0 409 aaPredicted RBP22.72■■□□□ 1.23
SNF8-205ENST00000507302 JMYQ8N9B5 988 aa22.72■■□□□ 1.23
SNF8-205ENST00000507302 PIM2Q9P1W9 311 aa22.72■■□□□ 1.23
SNF8-205ENST00000507302 USP42Q9H9J4 1324 aaKnown RBP22.72■■□□□ 1.23
SNF8-205ENST00000507302 CRKLP46109 303 aaKnown RBP22.7■■□□□ 1.22
SNF8-205ENST00000507302 DDR1Q08345 913 aa22.7■■□□□ 1.22
SNF8-205ENST00000507302 TIMELESSQ9UNS1 1208 aa22.7■■□□□ 1.22
SNF8-205ENST00000507302 NRXN2Q9P2S2 1712 aa22.7■■□□□ 1.22
SNF8-205ENST00000507302 KCPQ6ZWJ8 1503 aa22.69■■□□□ 1.22
SNF8-205ENST00000507302 CABP4P57796 275 aa22.69■■□□□ 1.22
SNF8-205ENST00000507302 KLRG1Q96E93 195 aa22.69■■□□□ 1.22
SNF8-205ENST00000507302 TM4SF1P30408 202 aa22.68■■□□□ 1.22
SNF8-205ENST00000507302 FKBP8Q14318 412 aa22.68■■□□□ 1.22
SNF8-205ENST00000507302 DALRD3Q5D0E6 543 aaKnown RBP22.68■■□□□ 1.22
SNF8-205ENST00000507302 ZNF530Q6P9A1 599 aaPredicted RBP22.68■■□□□ 1.22
SNF8-205ENST00000507302 PCNTO95613 3336 aa22.68■■□□□ 1.22
SNF8-205ENST00000507302 DLEC1Q9Y238 1755 aa22.68■■□□□ 1.22
SNF8-205ENST00000507302 SRP68Q9UHB9 627 aaKnown RBP22.67■■□□□ 1.22
SNF8-205ENST00000507302 AFDNP55196 1824 aaKnown RBP22.66■■□□□ 1.22
SNF8-205ENST00000507302 KDM2BQ8NHM5 1336 aa22.66■■□□□ 1.22
SNF8-205ENST00000507302 INTS5Q6P9B9 1019 aaKnown RBP22.66■■□□□ 1.22
SNF8-205ENST00000507302 POLRMTO00411 1230 aaKnown RBP22.65■■□□□ 1.22
SNF8-205ENST00000507302 TNNT2P45379 298 aaPredicted RBP22.65■■□□□ 1.22
SNF8-205ENST00000507302 MTHFSP49914 203 aa22.65■■□□□ 1.22
SNF8-205ENST00000507302 NFATC2IPQ8NCF5 419 aa22.65■■□□□ 1.22
SNF8-205ENST00000507302 ZC3H4Q9UPT8 1303 aaKnown RBP22.64■■□□□ 1.22
SNF8-205ENST00000507302 PTCD1O75127 700 aaKnown RBP22.64■■□□□ 1.21
SNF8-205ENST00000507302 AEBP1Q8IUX7 1158 aa22.64■■□□□ 1.21
SNF8-205ENST00000507302 MRC1P22897 1456 aa22.63■■□□□ 1.21
SNF8-205ENST00000507302 VIRMAQ69YN4 1812 aaKnown RBP22.62■■□□□ 1.21
SNF8-205ENST00000507302 CHRNA5P30532 468 aa22.62■■□□□ 1.21
SNF8-205ENST00000507302 C16orf71Q8IYS4 520 aaPredicted RBP22.62■■□□□ 1.21
SNF8-205ENST00000507302 RNF181Q9P0P0 153 aa22.62■■□□□ 1.21
SNF8-205ENST00000507302 HTRA3P83110 453 aa22.61■■□□□ 1.21
SNF8-205ENST00000507302 SOS1Q07889 1333 aaPredicted RBP22.6■■□□□ 1.21
SNF8-205ENST00000507302 C1orf141Q5JVX7 400 aa22.6■■□□□ 1.21
SNF8-205ENST00000507302 RRAGCQ9HB90 399 aa22.6■■□□□ 1.21
SNF8-205ENST00000507302 COL13A1Q5TAT6 717 aaPredicted RBP22.58■■□□□ 1.21
SNF8-205ENST00000507302 PANK3Q9H999 370 aa22.58■■□□□ 1.21
SNF8-205ENST00000507302 IL13P35225 146 aa22.57■■□□□ 1.2
SNF8-205ENST00000507302 SMC1BQ8NDV3 1235 aa22.57■■□□□ 1.2
SNF8-205ENST00000507302 UBR2Q8IWV8 1755 aa22.57■■□□□ 1.2
SNF8-205ENST00000507302 CCDC88AQ3V6T2 1871 aa22.56■■□□□ 1.2
SNF8-205ENST00000507302 CYP19A1P11511 503 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms