RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 AEBP1Q8IUX7 1158 aa10.23□□□□□ -0.77
SFXN1-206ENST00000507017 HMOX1P09601 288 aa10.22□□□□□ -0.77
SFXN1-206ENST00000507017 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
SFXN1-206ENST00000507017 KDM6AO15550 1401 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-206ENST00000507017 COL3A1P02461 1466 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-206ENST00000507017 MRC1P22897 1456 aa10.22□□□□□ -0.77
SFXN1-206ENST00000507017 SCN11AQ9UI33 1791 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 GNAT3A8MTJ3 354 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 PPP2R1AP30153 589 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 PTGER2P43116 358 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 TEFQ10587 303 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 CNGB1Q14028 1251 aaPredicted RBP10.21□□□□□ -0.77
SFXN1-206ENST00000507017 RALBP1Q15311 655 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 RC3H1Q5TC82 1133 aaKnown RBP10.21□□□□□ -0.77
SFXN1-206ENST00000507017 TTC5Q8N0Z6 440 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 SLC52A2Q9HAB3 445 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 ATG3Q9NT62 314 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 ASAP1Q9ULH1 1129 aa10.21□□□□□ -0.77
SFXN1-206ENST00000507017 RTCBQ9Y3I0 505 aaKnown RBP10.21□□□□□ -0.77
SFXN1-206ENST00000507017 CNTNAP4Q9C0A0 1308 aa10.21□□□□□ -0.78
SFXN1-206ENST00000507017 CICQ96RK0 1608 aaPredicted RBP10.21□□□□□ -0.78
SFXN1-206ENST00000507017 TUBGCP6Q96RT7 1819 aa10.21□□□□□ -0.78
SFXN1-206ENST00000507017 GNPATO15228 680 aa10.2□□□□□ -0.78
SFXN1-206ENST00000507017 FCHSD2O94868 740 aa10.2□□□□□ -0.78
SFXN1-206ENST00000507017 U2AF1L5P0DN76 240 aaPredicted RBP10.2□□□□□ -0.78
SFXN1-206ENST00000507017 U2AF1Q01081 240 aaKnown RBP eCLIP10.2□□□□□ -0.78
SFXN1-206ENST00000507017 COL24A1Q17RW2 1714 aa10.2□□□□□ -0.78
SFXN1-206ENST00000507017 RTF1Q92541 710 aaKnown RBP10.2□□□□□ -0.78
SFXN1-206ENST00000507017 SGIP1Q9BQI5 828 aa10.2□□□□□ -0.78
SFXN1-206ENST00000507017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.19□□□□□ -0.78
SFXN1-206ENST00000507017 RNMTO43148 476 aaKnown RBP10.19□□□□□ -0.78
SFXN1-206ENST00000507017 KCNQ4P56696 695 aa10.19□□□□□ -0.78
SFXN1-206ENST00000507017 NPM2Q86SE8 214 aaKnown RBP10.19□□□□□ -0.78
SFXN1-206ENST00000507017 COL23A1Q86Y22 540 aaPredicted RBP10.19□□□□□ -0.78
SFXN1-206ENST00000507017 VSIG10Q8N0Z9 540 aa10.19□□□□□ -0.78
SFXN1-206ENST00000507017 NFATC2IPQ8NCF5 419 aa10.19□□□□□ -0.78
SFXN1-206ENST00000507017 FHDC1Q9C0D6 1143 aaPredicted RBP10.19□□□□□ -0.78
SFXN1-206ENST00000507017 UBR3Q6ZT12 1888 aa10.19□□□□□ -0.78
SFXN1-206ENST00000507017 HTATSF1O43719 755 aaKnown RBP10.18□□□□□ -0.78
SFXN1-206ENST00000507017 PHF14O94880 888 aa10.18□□□□□ -0.78
SFXN1-206ENST00000507017 PRKAR2BP31323 418 aa10.18□□□□□ -0.78
SFXN1-206ENST00000507017 MTHFSDQ2M296 383 aaKnown RBP10.18□□□□□ -0.78
SFXN1-206ENST00000507017 TRAPPC3LQ5T215 181 aa10.18□□□□□ -0.78
SFXN1-206ENST00000507017 KLHL34Q8N239 644 aa10.18□□□□□ -0.78
SFXN1-206ENST00000507017 LINC00116Q8NCU8 138 aa10.18□□□□□ -0.78
SFXN1-206ENST00000507017 SYT17Q9BSW7 474 aa10.18□□□□□ -0.78
SFXN1-206ENST00000507017 TEX13AQ9BXU3 409 aaPredicted RBP10.18□□□□□ -0.78
SFXN1-206ENST00000507017 PDGFDQ9GZP0 370 aaPredicted RBP10.18□□□□□ -0.78
SFXN1-206ENST00000507017 ADAMTS7Q9UKP4 1686 aa10.18□□□□□ -0.78
SFXN1-206ENST00000507017 MAPK8IP3Q9UPT6 1336 aa10.17□□□□□ -0.78
SFXN1-206ENST00000507017 PTCD1O75127 700 aaKnown RBP10.17□□□□□ -0.78
SFXN1-206ENST00000507017 RPS6KA4O75676 772 aa10.17□□□□□ -0.78
SFXN1-206ENST00000507017 RFC4P35249 363 aa10.17□□□□□ -0.78
SFXN1-206ENST00000507017 NLGN1Q8N2Q7 840 aa10.17□□□□□ -0.78
SFXN1-206ENST00000507017 CD2APQ9Y5K6 639 aa10.17□□□□□ -0.78
SFXN1-206ENST00000507017 COL5A3P25940 1745 aaPredicted RBP10.16□□□□□ -0.78
SFXN1-206ENST00000507017 STARD3NLO95772 234 aa10.16□□□□□ -0.78
SFXN1-206ENST00000507017 RSPH6AQ9H0K4 717 aa10.16□□□□□ -0.78
SFXN1-206ENST00000507017 MYBBP1AQ9BQG0 1328 aaKnown RBP10.15□□□□□ -0.78
SFXN1-206ENST00000507017 VIRMAQ69YN4 1812 aaKnown RBP10.15□□□□□ -0.78
SFXN1-206ENST00000507017 A0A087WZG4 1122 aa10.15□□□□□ -0.78
SFXN1-206ENST00000507017 GRIN3BO60391 1043 aa10.15□□□□□ -0.78
SFXN1-206ENST00000507017 ITPK1Q13572 414 aa10.15□□□□□ -0.78
SFXN1-206ENST00000507017 GPR162Q16538 588 aa10.15□□□□□ -0.78
SFXN1-206ENST00000507017 PNISRQ8TF01 805 aaKnown RBP10.15□□□□□ -0.78
SFXN1-206ENST00000507017 SRCAPQ6ZRS2 3230 aa10.14□□□□□ -0.79
SFXN1-206ENST00000507017 ZPR1O75312 459 aa10.14□□□□□ -0.79
SFXN1-206ENST00000507017 CRKLP46109 303 aaKnown RBP10.14□□□□□ -0.79
SFXN1-206ENST00000507017 LMOD3Q0VAK6 560 aa10.14□□□□□ -0.79
SFXN1-206ENST00000507017 FMNL2Q96PY5 1086 aa10.14□□□□□ -0.79
SFXN1-206ENST00000507017 CCDC87Q9NVE4 849 aa10.14□□□□□ -0.79
SFXN1-206ENST00000507017 CEMIPQ8WUJ3 1361 aa10.14□□□□□ -0.79
SFXN1-206ENST00000507017 YY1P25490 414 aa10.13□□□□□ -0.79
SFXN1-206ENST00000507017 MSL1Q68DK7 614 aa10.13□□□□□ -0.79
SFXN1-206ENST00000507017 LGR6Q9HBX8 967 aa10.13□□□□□ -0.79
SFXN1-206ENST00000507017 PARP3Q9Y6F1 533 aa10.13□□□□□ -0.79
SFXN1-206ENST00000507017 TJP1Q07157 1748 aa10.13□□□□□ -0.79
SFXN1-206ENST00000507017 UBR2Q8IWV8 1755 aa10.12□□□□□ -0.79
SFXN1-206ENST00000507017 BTBD11A6QL63 1104 aa10.12□□□□□ -0.79
SFXN1-206ENST00000507017 DDX10Q13206 875 aaKnown RBP10.12□□□□□ -0.79
SFXN1-206ENST00000507017 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.79
SFXN1-206ENST00000507017 ZNF790Q6PG37 636 aa10.12□□□□□ -0.79
SFXN1-206ENST00000507017 HEG1Q9ULI3 1381 aa10.12□□□□□ -0.79
SFXN1-206ENST00000507017 KCPQ6ZWJ8 1503 aa10.12□□□□□ -0.79
SFXN1-206ENST00000507017 PELP1Q8IZL8 1130 aaKnown RBP10.11□□□□□ -0.79
SFXN1-206ENST00000507017 ARHGEF1Q92888 912 aaKnown RBP10.11□□□□□ -0.79
SFXN1-206ENST00000507017 COL15A1P39059 1388 aa10.11□□□□□ -0.79
SFXN1-206ENST00000507017 USP42Q9H9J4 1324 aaKnown RBP10.1□□□□□ -0.79
SFXN1-206ENST00000507017 MMP10P09238 476 aa10.1□□□□□ -0.79
SFXN1-206ENST00000507017 CYP19A1P11511 503 aaPredicted RBP10.1□□□□□ -0.79
SFXN1-206ENST00000507017 TGFB2P61812 414 aa10.1□□□□□ -0.79
SFXN1-206ENST00000507017 DNAJC10Q8IXB1 793 aa10.1□□□□□ -0.79
SFXN1-206ENST00000507017 SLC4A9Q96Q91 983 aa10.1□□□□□ -0.79
SFXN1-206ENST00000507017 SIPA1L3O60292 1781 aaPredicted RBP10.1□□□□□ -0.79
SFXN1-206ENST00000507017 SOS1Q07889 1333 aaPredicted RBP10.09□□□□□ -0.79
SFXN1-206ENST00000507017 CHD4Q14839 1912 aa10.09□□□□□ -0.79
SFXN1-206ENST00000507017 SNRPA1P09661 255 aaKnown RBP10.09□□□□□ -0.79
SFXN1-206ENST00000507017 GYS1P13807 737 aa10.09□□□□□ -0.79
SFXN1-206ENST00000507017 SLC39A6Q13433 755 aa10.09□□□□□ -0.79
SFXN1-206ENST00000507017 NFE2L2Q16236 605 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms