RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
SIL1-209ENST00000507002 DZIP1LQ8IYY4 767 aaKnown RBP16.14■□□□□ 0.17
SIL1-209ENST00000507002 COG6Q9Y2V7 657 aa16.14■□□□□ 0.17
SIL1-209ENST00000507002 MRC1P22897 1456 aa16.14■□□□□ 0.17
SIL1-209ENST00000507002 SOS1Q07889 1333 aaPredicted RBP16.14■□□□□ 0.17
SIL1-209ENST00000507002 JCADQ9P266 1359 aa16.13■□□□□ 0.17
SIL1-209ENST00000507002 HSP90AB1P08238 724 aaKnown RBP16.13■□□□□ 0.17
SIL1-209ENST00000507002 TRIM27P14373 513 aa16.13■□□□□ 0.17
SIL1-209ENST00000507002 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
SIL1-209ENST00000507002 ZCRB1Q8TBF4 217 aaKnown RBP16.13■□□□□ 0.17
SIL1-209ENST00000507002 CLUAP1Q96AJ1 413 aa16.13■□□□□ 0.17
SIL1-209ENST00000507002 PCDH11XQ9BZA7 1347 aa16.13■□□□□ 0.17
SIL1-209ENST00000507002 PCDH11YQ9BZA8 1340 aa16.13■□□□□ 0.17
SIL1-209ENST00000507002 PELP1Q8IZL8 1130 aaKnown RBP16.12■□□□□ 0.17
SIL1-209ENST00000507002 BTBD11A6QL63 1104 aa16.11■□□□□ 0.17
SIL1-209ENST00000507002 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
SIL1-209ENST00000507002 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
SIL1-209ENST00000507002 DISP2A7MBM2 1401 aa16.11■□□□□ 0.17
SIL1-209ENST00000507002 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
SIL1-209ENST00000507002 MVPQ14764 893 aaKnown RBP16.1■□□□□ 0.17
SIL1-209ENST00000507002 USP35Q9P2H5 1018 aa16.1■□□□□ 0.17
SIL1-209ENST00000507002 KCNQ3O43525 872 aa16.09■□□□□ 0.17
SIL1-209ENST00000507002 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
SIL1-209ENST00000507002 SLIT2O94813 1529 aa16.09■□□□□ 0.17
SIL1-209ENST00000507002 AAMPQ13685 434 aa16.08■□□□□ 0.16
SIL1-209ENST00000507002 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
SIL1-209ENST00000507002 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
SIL1-209ENST00000507002 HOXB7P09629 217 aa16.07■□□□□ 0.16
SIL1-209ENST00000507002 TMEM57Q8N5G2 664 aa16.07■□□□□ 0.16
SIL1-209ENST00000507002 STK31Q9BXU1 1019 aa16.07■□□□□ 0.16
SIL1-209ENST00000507002 TOGARAM1Q9Y4F4 1720 aa16.06■□□□□ 0.16
SIL1-209ENST00000507002 ABCC4O15439 1325 aa16.06■□□□□ 0.16
SIL1-209ENST00000507002 NKX1-1Q15270 411 aaPredicted RBP16.06■□□□□ 0.16
SIL1-209ENST00000507002 ITPRIPQ8IWB1 547 aa16.06■□□□□ 0.16
SIL1-209ENST00000507002 PTPRCP08575 1304 aa16.05■□□□□ 0.16
SIL1-209ENST00000507002 SPATA31A6Q5VVP1 1343 aa16.05■□□□□ 0.16
SIL1-209ENST00000507002 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
SIL1-209ENST00000507002 CABP4P57796 275 aa16.05■□□□□ 0.16
SIL1-209ENST00000507002 NFATC2IPQ8NCF5 419 aa16.05■□□□□ 0.16
SIL1-209ENST00000507002 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
SIL1-209ENST00000507002 DDX19BQ9UMR2 479 aa16.05■□□□□ 0.16
SIL1-209ENST00000507002 C5P01031 1676 aa16.05■□□□□ 0.16
SIL1-209ENST00000507002 RGS12O14924 1447 aa16.04■□□□□ 0.16
SIL1-209ENST00000507002 HEG1Q9ULI3 1381 aa16.04■□□□□ 0.16
SIL1-209ENST00000507002 SPATA31A1Q5TZJ5 1347 aa16.04■□□□□ 0.16
SIL1-209ENST00000507002 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
SIL1-209ENST00000507002 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
SIL1-209ENST00000507002 LRP6O75581 1613 aa16.04■□□□□ 0.16
SIL1-209ENST00000507002 SPATA31A5Q5VU36 1347 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 SPATA31A7Q8IWB4 1347 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 KAT6BQ8WYB5 2073 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 HSPA1LP34931 641 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 SLC39A6Q13433 755 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 ZNF790Q6PG37 636 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 G2E3Q7L622 706 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 NECTIN2Q92692 538 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 THRAP3Q9Y2W1 955 aaKnown RBP16.03■□□□□ 0.16
SIL1-209ENST00000507002 PAPPAQ13219 1627 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 ITGB4P16144 1822 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
SIL1-209ENST00000507002 TNS2Q63HR2 1409 aa16.02■□□□□ 0.16
SIL1-209ENST00000507002 GIGYF1O75420 1035 aaPredicted RBP16.02■□□□□ 0.16
SIL1-209ENST00000507002 CDCA7Q9BWT1 371 aaPredicted RBP16.02■□□□□ 0.16
SIL1-209ENST00000507002 N4BP2Q86UW6 1770 aaPredicted RBP16.02■□□□□ 0.15
SIL1-209ENST00000507002 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.02■□□□□ 0.15
SIL1-209ENST00000507002 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
SIL1-209ENST00000507002 EIF2S2P20042 333 aaKnown RBP16.01■□□□□ 0.15
SIL1-209ENST00000507002 UNC5CLQ8IV45 518 aa16.01■□□□□ 0.15
SIL1-209ENST00000507002 NGLY1Q96IV0 654 aa16.01■□□□□ 0.15
SIL1-209ENST00000507002 C8orf37Q96NL8 207 aa16.01■□□□□ 0.15
SIL1-209ENST00000507002 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
SIL1-209ENST00000507002 CENPQQ7L2Z9 268 aaPredicted RBP16■□□□□ 0.15
SIL1-209ENST00000507002 CCDC9Q9Y3X0 531 aaKnown RBP16■□□□□ 0.15
SIL1-209ENST00000507002 GLI3P10071 1580 aa16■□□□□ 0.15
SIL1-209ENST00000507002 BCL9LQ86UU0 1499 aa15.99■□□□□ 0.15
SIL1-209ENST00000507002 EXOC5O00471 708 aa15.99■□□□□ 0.15
SIL1-209ENST00000507002 FLIIQ13045 1269 aa15.99■□□□□ 0.15
SIL1-209ENST00000507002 INTS3Q68E01 1043 aaKnown RBP15.99■□□□□ 0.15
SIL1-209ENST00000507002 TTC5Q8N0Z6 440 aa15.99■□□□□ 0.15
SIL1-209ENST00000507002 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
SIL1-209ENST00000507002 BARGINQ6ZT62 677 aa15.98■□□□□ 0.15
SIL1-209ENST00000507002 ZNF496Q96IT1 587 aaPredicted RBP15.98■□□□□ 0.15
SIL1-209ENST00000507002 CHMP4BQ9H444 224 aaKnown RBP15.98■□□□□ 0.15
SIL1-209ENST00000507002 ZBTB40Q9NUA8 1239 aa15.98■□□□□ 0.15
SIL1-209ENST00000507002 CHPF2Q9P2E5 772 aa15.98■□□□□ 0.15
SIL1-209ENST00000507002 DOT1LQ8TEK3 1739 aa15.97■□□□□ 0.15
SIL1-209ENST00000507002 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
SIL1-209ENST00000507002 FKBP5Q13451 457 aaPredicted RBP15.97■□□□□ 0.15
SIL1-209ENST00000507002 VPS72Q15906 364 aa15.97■□□□□ 0.15
SIL1-209ENST00000507002 FNBP4Q8N3X1 1017 aaPredicted RBP15.97■□□□□ 0.15
SIL1-209ENST00000507002 FMNL2Q96PY5 1086 aa15.97■□□□□ 0.15
SIL1-209ENST00000507002 KCPQ6ZWJ8 1503 aa15.96■□□□□ 0.15
SIL1-209ENST00000507002 ZBTB7BO15156 539 aaPredicted RBP15.96■□□□□ 0.15
SIL1-209ENST00000507002 DBF4Q9UBU7 674 aaPredicted RBP15.96■□□□□ 0.15
SIL1-209ENST00000507002 F6X3S4 739 aa15.95■□□□□ 0.14
SIL1-209ENST00000507002 IGHDP01880 384 aa15.95■□□□□ 0.14
SIL1-209ENST00000507002 SNRPA1P09661 255 aaKnown RBP15.95■□□□□ 0.14
SIL1-209ENST00000507002 DDB1Q16531 1140 aa15.95■□□□□ 0.14
SIL1-209ENST00000507002 MEX3CQ5U5Q3 659 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms