RNA–Protein interactions for RNA: ENST00000506974.5

NDUFS4-204, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 1 (best)

Gene NDUFS4, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-204ENST00000506974 MEGF6O75095 1541 aa13.21□□□□□ -0.29
NDUFS4-204ENST00000506974 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
NDUFS4-204ENST00000506974 SCN11AQ9UI33 1791 aa13.2□□□□□ -0.3
NDUFS4-204ENST00000506974 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
NDUFS4-204ENST00000506974 ADAMTS7Q9UKP4 1686 aa13.2□□□□□ -0.3
NDUFS4-204ENST00000506974 RGS12O14924 1447 aa13.2□□□□□ -0.3
NDUFS4-204ENST00000506974 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
NDUFS4-204ENST00000506974 CSB-PGBD3P0DP91 1061 aa13.19□□□□□ -0.3
NDUFS4-204ENST00000506974 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
NDUFS4-204ENST00000506974 PHACTR3Q96KR7 559 aa13.19□□□□□ -0.3
NDUFS4-204ENST00000506974 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
NDUFS4-204ENST00000506974 STRN4Q9NRL3 753 aa13.19□□□□□ -0.3
NDUFS4-204ENST00000506974 NLRP2Q9NX02 1062 aa13.19□□□□□ -0.3
NDUFS4-204ENST00000506974 DISP2A7MBM2 1401 aa13.19□□□□□ -0.3
NDUFS4-204ENST00000506974 GLI3P10071 1580 aa13.19□□□□□ -0.3
NDUFS4-204ENST00000506974 SIPA1L3O60292 1781 aaPredicted RBP13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 APAF1O14727 1248 aa13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 EVA1CP58658 441 aa13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 TOM1L2Q6ZVM7 507 aa13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 TCP11L2Q8N4U5 519 aa13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 OVOS2A0A0G2JMS6 1433 aa13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 THSD7AQ9UPZ6 1657 aa13.18□□□□□ -0.3
NDUFS4-204ENST00000506974 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
NDUFS4-204ENST00000506974 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
NDUFS4-204ENST00000506974 MAPK8IP3Q9UPT6 1336 aa13.17□□□□□ -0.3
NDUFS4-204ENST00000506974 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
NDUFS4-204ENST00000506974 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
NDUFS4-204ENST00000506974 PPP1R37O75864 691 aa13.16□□□□□ -0.3
NDUFS4-204ENST00000506974 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
NDUFS4-204ENST00000506974 THRAP3Q9Y2W1 955 aaKnown RBP13.16□□□□□ -0.3
NDUFS4-204ENST00000506974 CCDC9Q9Y3X0 531 aaKnown RBP13.16□□□□□ -0.3
NDUFS4-204ENST00000506974 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
NDUFS4-204ENST00000506974 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
NDUFS4-204ENST00000506974 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
NDUFS4-204ENST00000506974 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
NDUFS4-204ENST00000506974 KCNV2Q8TDN2 545 aa13.15□□□□□ -0.3
NDUFS4-204ENST00000506974 ZNF521Q96K83 1311 aa13.14□□□□□ -0.31
NDUFS4-204ENST00000506974 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
NDUFS4-204ENST00000506974 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
NDUFS4-204ENST00000506974 SEPT12Q8IYM1 358 aa13.14□□□□□ -0.31
NDUFS4-204ENST00000506974 NGEFQ8N5V2 710 aa13.14□□□□□ -0.31
NDUFS4-204ENST00000506974 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
NDUFS4-204ENST00000506974 ITGB4P16144 1822 aa13.13□□□□□ -0.31
NDUFS4-204ENST00000506974 BRWD3Q6RI45 1802 aa13.13□□□□□ -0.31
NDUFS4-204ENST00000506974 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
NDUFS4-204ENST00000506974 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
NDUFS4-204ENST00000506974 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
NDUFS4-204ENST00000506974 NEFMP07197 916 aa13.12□□□□□ -0.31
NDUFS4-204ENST00000506974 TATP17735 454 aaPredicted RBP13.12□□□□□ -0.31
NDUFS4-204ENST00000506974 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
NDUFS4-204ENST00000506974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.319e-7■■■□□ 15.7
NDUFS4-204ENST00000506974 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
NDUFS4-204ENST00000506974 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
NDUFS4-204ENST00000506974 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
NDUFS4-204ENST00000506974 IL2RBP14784 551 aa13.11□□□□□ -0.31
NDUFS4-204ENST00000506974 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
NDUFS4-204ENST00000506974 KRT27Q7Z3Y8 459 aa13.11□□□□□ -0.31
NDUFS4-204ENST00000506974 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
NDUFS4-204ENST00000506974 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
NDUFS4-204ENST00000506974 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 TIE1P35590 1138 aa13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 RIPK4P57078 832 aa13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 WWC1Q8IX03 1113 aa13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 CDCA7Q9BWT1 371 aaPredicted RBP13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 USP35Q9P2H5 1018 aa13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 SBF2Q86WG5 1849 aa13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
NDUFS4-204ENST00000506974 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
NDUFS4-204ENST00000506974 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
NDUFS4-204ENST00000506974 MRC1P22897 1456 aa13.09□□□□□ -0.31
NDUFS4-204ENST00000506974 KAT6BQ8WYB5 2073 aa13.08□□□□□ -0.32
NDUFS4-204ENST00000506974 KDM6AO15550 1401 aaPredicted RBP13.08□□□□□ -0.32
NDUFS4-204ENST00000506974 CLCN6P51797 869 aa13.08□□□□□ -0.32
NDUFS4-204ENST00000506974 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
NDUFS4-204ENST00000506974 SPG7Q9UQ90 795 aa13.08□□□□□ -0.32
NDUFS4-204ENST00000506974 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 PAPPAQ13219 1627 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 CYP27B1O15528 508 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 HTATSF1O43719 755 aaKnown RBP13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 PHKG2P15735 406 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 E2F4Q16254 413 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 PCDH11XQ9BZA7 1347 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 PCDH11YQ9BZA8 1340 aa13.07□□□□□ -0.32
NDUFS4-204ENST00000506974 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
NDUFS4-204ENST00000506974 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
NDUFS4-204ENST00000506974 UBR2Q8IWV8 1755 aa13.06□□□□□ -0.32
NDUFS4-204ENST00000506974 A0A0G2JS52 829 aa13.05□□□□□ -0.32
NDUFS4-204ENST00000506974 PDE4AP27815 886 aa13.05□□□□□ -0.32
NDUFS4-204ENST00000506974 MYT1Q01538 1121 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms