RNA–Protein interactions for RNA: ENST00000506696.1

SNCB-203, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNCB, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-203ENST00000506696 IL13P35225 146 aa18.78■□□□□ 0.6
SNCB-203ENST00000506696 ATP6V1AP38606 617 aa18.78■□□□□ 0.6
SNCB-203ENST00000506696 PLEKHO1Q53GL0 409 aaPredicted RBP18.78■□□□□ 0.6
SNCB-203ENST00000506696 GNPATO15228 680 aa18.77■□□□□ 0.6
SNCB-203ENST00000506696 SLC4A9Q96Q91 983 aa18.77■□□□□ 0.6
SNCB-203ENST00000506696 KDRP35968 1356 aa18.77■□□□□ 0.6
SNCB-203ENST00000506696 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
SNCB-203ENST00000506696 MTHFSP49914 203 aa18.75■□□□□ 0.59
SNCB-203ENST00000506696 DCAF5Q96JK2 942 aa18.75■□□□□ 0.59
SNCB-203ENST00000506696 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
SNCB-203ENST00000506696 HMOX1P09601 288 aa18.74■□□□□ 0.59
SNCB-203ENST00000506696 YBX3P16989 372 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNCB-203ENST00000506696 WWC3Q9ULE0 1092 aa18.74■□□□□ 0.59
SNCB-203ENST00000506696 PLEKHG2Q9H7P9 1386 aa18.73■□□□□ 0.59
SNCB-203ENST00000506696 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
SNCB-203ENST00000506696 CABP4P57796 275 aa18.73■□□□□ 0.59
SNCB-203ENST00000506696 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
SNCB-203ENST00000506696 FLAD1Q8NFF5 587 aa18.73■□□□□ 0.59
SNCB-203ENST00000506696 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
SNCB-203ENST00000506696 AMOTQ4VCS5 1084 aa18.72■□□□□ 0.59
SNCB-203ENST00000506696 ZNF784Q8NCA9 323 aaPredicted RBP18.72■□□□□ 0.59
SNCB-203ENST00000506696 SSFA2P28290 1259 aa18.71■□□□□ 0.59
SNCB-203ENST00000506696 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
SNCB-203ENST00000506696 PTCD1O75127 700 aaKnown RBP18.7■□□□□ 0.58
SNCB-203ENST00000506696 CHD4Q14839 1912 aa18.7■□□□□ 0.58
SNCB-203ENST00000506696 NFATC2IPQ8NCF5 419 aa18.69■□□□□ 0.58
SNCB-203ENST00000506696 COL3A1P02461 1466 aaPredicted RBP18.68■□□□□ 0.58
SNCB-203ENST00000506696 TJP1Q07157 1748 aa18.68■□□□□ 0.58
SNCB-203ENST00000506696 SCN11AQ9UI33 1791 aa18.68■□□□□ 0.58
SNCB-203ENST00000506696 LGR6Q9HBX8 967 aa18.67■□□□□ 0.58
SNCB-203ENST00000506696 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
SNCB-203ENST00000506696 CICQ96RK0 1608 aaPredicted RBP18.65■□□□□ 0.58
SNCB-203ENST00000506696 RTCBQ9Y3I0 505 aaKnown RBP18.65■□□□□ 0.58
SNCB-203ENST00000506696 CD2APQ9Y5K6 639 aa18.65■□□□□ 0.58
SNCB-203ENST00000506696 ZNF831Q5JPB2 1677 aa18.65■□□□□ 0.58
SNCB-203ENST00000506696 C4AP0C0L4 1744 aa18.65■□□□□ 0.58
SNCB-203ENST00000506696 MYH14Q7Z406 1995 aaKnown RBP18.64■□□□□ 0.58
SNCB-203ENST00000506696 MMP10P09238 476 aa18.64■□□□□ 0.57
SNCB-203ENST00000506696 HMGB2P26583 209 aaKnown RBP18.64■□□□□ 0.57
SNCB-203ENST00000506696 MTHFSDQ2M296 383 aaKnown RBP18.64■□□□□ 0.57
SNCB-203ENST00000506696 AKAP4Q5JQC9 854 aa18.64■□□□□ 0.57
SNCB-203ENST00000506696 CNTNAP4Q9C0A0 1308 aa18.64■□□□□ 0.57
SNCB-203ENST00000506696 U2SURPO15042 1029 aaKnown RBP18.63■□□□□ 0.57
SNCB-203ENST00000506696 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
SNCB-203ENST00000506696 SLC39A6Q13433 755 aa18.63■□□□□ 0.57
SNCB-203ENST00000506696 TRAPPC3LQ5T215 181 aa18.63■□□□□ 0.57
SNCB-203ENST00000506696 ARHGEF1Q92888 912 aaKnown RBP18.63■□□□□ 0.57
SNCB-203ENST00000506696 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
SNCB-203ENST00000506696 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
SNCB-203ENST00000506696 SRP68Q9UHB9 627 aaKnown RBP18.62■□□□□ 0.57
SNCB-203ENST00000506696 MRC1P22897 1456 aa18.62■□□□□ 0.57
SNCB-203ENST00000506696 RNMTO43148 476 aaKnown RBP18.61■□□□□ 0.57
SNCB-203ENST00000506696 SLC52A2Q9HAB3 445 aa18.61■□□□□ 0.57
SNCB-203ENST00000506696 NPC1L1Q9UHC9 1359 aa18.6■□□□□ 0.57
SNCB-203ENST00000506696 RPS6KA4O75676 772 aa18.6■□□□□ 0.57
SNCB-203ENST00000506696 RC3H1Q5TC82 1133 aaKnown RBP18.6■□□□□ 0.57
SNCB-203ENST00000506696 DNAJC10Q8IXB1 793 aa18.6■□□□□ 0.57
SNCB-203ENST00000506696 KCPQ6ZWJ8 1503 aa18.59■□□□□ 0.57
SNCB-203ENST00000506696 GYS1P13807 737 aa18.59■□□□□ 0.57
SNCB-203ENST00000506696 RFC4P35249 363 aa18.59■□□□□ 0.57
SNCB-203ENST00000506696 ADAMTS7Q9UKP4 1686 aa18.59■□□□□ 0.57
SNCB-203ENST00000506696 KIAA1551Q9HCM1 1747 aa18.58■□□□□ 0.57
SNCB-203ENST00000506696 GRIN3BO60391 1043 aa18.58■□□□□ 0.56
SNCB-203ENST00000506696 PXDNLA1KZ92 1463 aa18.58■□□□□ 0.56
SNCB-203ENST00000506696 N4BP2Q86UW6 1770 aaPredicted RBP18.58■□□□□ 0.56
SNCB-203ENST00000506696 C10orf71Q711Q0 1435 aa18.57■□□□□ 0.56
SNCB-203ENST00000506696 ADRA2BP18089 450 aa18.56■□□□□ 0.56
SNCB-203ENST00000506696 INTS5Q6P9B9 1019 aaKnown RBP18.56■□□□□ 0.56
SNCB-203ENST00000506696 FKBP8Q14318 412 aa18.55■□□□□ 0.56
SNCB-203ENST00000506696 NLGN1Q8N2Q7 840 aa18.54■□□□□ 0.56
SNCB-203ENST00000506696 CCDC87Q9NVE4 849 aa18.54■□□□□ 0.56
SNCB-203ENST00000506696 ATP10DQ9P241 1426 aa18.54■□□□□ 0.56
SNCB-203ENST00000506696 KIF13BQ9NQT8 1826 aa18.53■□□□□ 0.56
SNCB-203ENST00000506696 USP42Q9H9J4 1324 aaKnown RBP18.53■□□□□ 0.56
SNCB-203ENST00000506696 A0A0G2JLW4 131 aa18.53■□□□□ 0.56
SNCB-203ENST00000506696 DDR1Q08345 913 aa18.53■□□□□ 0.56
SNCB-203ENST00000506696 PHACTR3Q96KR7 559 aa18.53■□□□□ 0.56
SNCB-203ENST00000506696 CYP19A1P11511 503 aaPredicted RBP18.52■□□□□ 0.56
SNCB-203ENST00000506696 PPP2R1AP30153 589 aa18.52■□□□□ 0.56
SNCB-203ENST00000506696 PRKAR2BP31323 418 aa18.52■□□□□ 0.56
SNCB-203ENST00000506696 ZBTB1Q9Y2K1 713 aa18.52■□□□□ 0.56
SNCB-203ENST00000506696 PARP3Q9Y6F1 533 aa18.52■□□□□ 0.56
SNCB-203ENST00000506696 UBR2Q8IWV8 1755 aa18.52■□□□□ 0.55
SNCB-203ENST00000506696 SOS1Q07889 1333 aaPredicted RBP18.51■□□□□ 0.55
SNCB-203ENST00000506696 DPEP1P16444 411 aa18.51■□□□□ 0.55
SNCB-203ENST00000506696 IL17REQ8NFR9 667 aa18.51■□□□□ 0.55
SNCB-203ENST00000506696 ZNF526Q8TF50 670 aaPredicted RBP18.51■□□□□ 0.55
SNCB-203ENST00000506696 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
SNCB-203ENST00000506696 RSPH6AQ9H0K4 717 aa18.5■□□□□ 0.55
SNCB-203ENST00000506696 GNAT3A8MTJ3 354 aa18.49■□□□□ 0.55
SNCB-203ENST00000506696 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
SNCB-203ENST00000506696 GAS2L2Q8NHY3 880 aa18.49■□□□□ 0.55
SNCB-203ENST00000506696 CFAP53Q96M91 514 aa18.49■□□□□ 0.55
SNCB-203ENST00000506696 BCS1LQ9Y276 419 aa18.49■□□□□ 0.55
SNCB-203ENST00000506696 COL15A1P39059 1388 aa18.49■□□□□ 0.55
SNCB-203ENST00000506696 SIPA1L3O60292 1781 aaPredicted RBP18.49■□□□□ 0.55
SNCB-203ENST00000506696 ADCY9O60503 1353 aa18.48■□□□□ 0.55
SNCB-203ENST00000506696 CANXP27824 592 aaKnown RBP18.48■□□□□ 0.55
SNCB-203ENST00000506696 C1QTNF8P60827 252 aa18.48■□□□□ 0.55
SNCB-203ENST00000506696 TEFQ10587 303 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms