RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 HDGFL1Q5TGJ6 251 aa9.02□□□□□ -0.97
TRIO-208ENST00000506611 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
TRIO-208ENST00000506611 SIRT1Q96EB6 747 aa9.02□□□□□ -0.97
TRIO-208ENST00000506611 TIMMDC1Q9NPL8 285 aa9.02□□□□□ -0.97
TRIO-208ENST00000506611 GPR25O00155 361 aa9.01□□□□□ -0.97
TRIO-208ENST00000506611 TLR1Q15399 786 aa9.01□□□□□ -0.97
TRIO-208ENST00000506611 RIPOR1Q6ZS17 1223 aa9.01□□□□□ -0.97
TRIO-208ENST00000506611 TBC1D9Q6ZT07 1266 aa9.01□□□□□ -0.97
TRIO-208ENST00000506611 PROSER2Q86WR7 435 aaPredicted RBP9.01□□□□□ -0.97
TRIO-208ENST00000506611 WWC1Q8IX03 1113 aa9.01□□□□□ -0.97
TRIO-208ENST00000506611 ZNF295-AS1Q8N0V1 137 aa9.01□□□□□ -0.97
TRIO-208ENST00000506611 USP3Q9Y6I4 520 aa9.01□□□□□ -0.97
TRIO-208ENST00000506611 USP17L5A8MUK1 530 aa9□□□□□ -0.97
TRIO-208ENST00000506611 PPARGC1BQ86YN6 1023 aaKnown RBP9□□□□□ -0.97
TRIO-208ENST00000506611 WHAMMQ8TF30 809 aa9□□□□□ -0.97
TRIO-208ENST00000506611 SLURP2P0DP57 97 aa8.99□□□□□ -0.97
TRIO-208ENST00000506611 EML3Q32P44 896 aa8.99□□□□□ -0.97
TRIO-208ENST00000506611 TMEM214Q6NUQ4 689 aaKnown RBP8.99□□□□□ -0.97
TRIO-208ENST00000506611 GPAMQ9HCL2 828 aa8.99□□□□□ -0.97
TRIO-208ENST00000506611 SERTAD1Q9UHV2 236 aa8.99□□□□□ -0.97
TRIO-208ENST00000506611 F11P03951 625 aa8.98□□□□□ -0.97
TRIO-208ENST00000506611 GTF2IP78347 998 aa8.98□□□□□ -0.97
TRIO-208ENST00000506611 ZNF385CQ66K41 422 aaPredicted RBP8.98□□□□□ -0.97
TRIO-208ENST00000506611 GTPBP3Q969Y2 492 aaKnown RBP8.98□□□□□ -0.97
TRIO-208ENST00000506611 SLC4A9Q96Q91 983 aa8.98□□□□□ -0.97
TRIO-208ENST00000506611 IQSEC3Q9UPP2 1182 aaPredicted RBP8.98□□□□□ -0.97
TRIO-208ENST00000506611 SMTNP53814 917 aa8.97□□□□□ -0.97
TRIO-208ENST00000506611 UBAP2LQ14157 1087 aaKnown RBP8.97□□□□□ -0.97
TRIO-208ENST00000506611 RHBDD1Q8TEB9 315 aa8.97□□□□□ -0.97
TRIO-208ENST00000506611 GLMNQ92990 594 aa8.97□□□□□ -0.97
TRIO-208ENST00000506611 KIAA1024Q9UPX6 916 aa8.97□□□□□ -0.97
TRIO-208ENST00000506611 NOD1Q9Y239 953 aa8.97□□□□□ -0.97
TRIO-208ENST00000506611 A0A1B0GTH6 734 aa8.96□□□□□ -0.98
TRIO-208ENST00000506611 USP17L3A6NCW0 530 aa8.96□□□□□ -0.98
TRIO-208ENST00000506611 USP17L4A6NCW7 530 aa8.96□□□□□ -0.98
TRIO-208ENST00000506611 MTFR1Q15390 333 aa8.96□□□□□ -0.98
TRIO-208ENST00000506611 GNASQ5JWF2 1037 aa8.96□□□□□ -0.98
TRIO-208ENST00000506611 USP17L2Q6R6M4 530 aa8.96□□□□□ -0.98
TRIO-208ENST00000506611 USP17L1Q7RTZ2 530 aa8.96□□□□□ -0.98
TRIO-208ENST00000506611 GMCL1Q96IK5 515 aa8.96□□□□□ -0.98
TRIO-208ENST00000506611 LZTS3O60299 673 aaPredicted RBP8.95□□□□□ -0.98
TRIO-208ENST00000506611 ADAMTS2O95450 1211 aa8.95□□□□□ -0.98
TRIO-208ENST00000506611 MSX1P28360 303 aa8.95□□□□□ -0.98
TRIO-208ENST00000506611 CLDN10P78369 228 aa8.95□□□□□ -0.98
TRIO-208ENST00000506611 PLEKHM2Q8IWE5 1019 aa8.95□□□□□ -0.98
TRIO-208ENST00000506611 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRIO-208ENST00000506611 NUCKS1Q9H1E3 243 aaKnown RBP8.95□□□□□ -0.98
TRIO-208ENST00000506611 RUBCNLQ9H714 662 aa8.95□□□□□ -0.98
TRIO-208ENST00000506611 ZNF358Q9NW07 568 aa8.95□□□□□ -0.98
TRIO-208ENST00000506611 A6NJR5 290 aa8.94□□□□□ -0.98
TRIO-208ENST00000506611 ZBTB7BO15156 539 aaPredicted RBP8.94□□□□□ -0.98
TRIO-208ENST00000506611 ATP9BO43861 1147 aa8.94□□□□□ -0.98
TRIO-208ENST00000506611 ATP4AP20648 1035 aa8.94□□□□□ -0.98
TRIO-208ENST00000506611 PLA2G4AP47712 749 aa8.94□□□□□ -0.98
TRIO-208ENST00000506611 A6NJY4 79 aa8.93□□□□□ -0.98
TRIO-208ENST00000506611 H7C1W4 665 aa8.93□□□□□ -0.98
TRIO-208ENST00000506611 EPHA4P54764 986 aa8.93□□□□□ -0.98
TRIO-208ENST00000506611 SRSF11Q05519 484 aaKnown RBP8.93□□□□□ -0.98
TRIO-208ENST00000506611 FAM181BA6NEQ2 426 aa8.92□□□□□ -0.98
TRIO-208ENST00000506611 LYPD4Q6UWN0 246 aa8.92□□□□□ -0.98
TRIO-208ENST00000506611 MBIPQ9NS73 344 aa8.92□□□□□ -0.98
TRIO-208ENST00000506611 CDK2AP1O14519 115 aa8.91□□□□□ -0.98
TRIO-208ENST00000506611 DKK1O94907 266 aa8.91□□□□□ -0.98
TRIO-208ENST00000506611 ARHGEF15O94989 841 aa8.91□□□□□ -0.98
TRIO-208ENST00000506611 GTF2E1P29083 439 aaPredicted RBP8.91□□□□□ -0.98
TRIO-208ENST00000506611 FOXK2Q01167 660 aa8.91□□□□□ -0.98
TRIO-208ENST00000506611 GSK3AP49840 483 aa8.9□□□□□ -0.98
TRIO-208ENST00000506611 PSME1Q06323 249 aa8.9□□□□□ -0.98
TRIO-208ENST00000506611 ZDHHC1Q8WTX9 485 aa8.9□□□□□ -0.98
TRIO-208ENST00000506611 NIFKQ9BYG3 293 aaKnown RBP8.9□□□□□ -0.98
TRIO-208ENST00000506611 CRISPLD1Q9H336 500 aa8.9□□□□□ -0.98
TRIO-208ENST00000506611 DNAAF2Q9NVR5 837 aaKnown RBP8.9□□□□□ -0.98
TRIO-208ENST00000506611 TFIP11Q9UBB9 837 aaKnown RBP8.9□□□□□ -0.98
TRIO-208ENST00000506611 HCN2Q9UL51 889 aa8.9□□□□□ -0.98
TRIO-208ENST00000506611 IGF1RP08069 1367 aa8.89□□□□□ -0.99
TRIO-208ENST00000506611 SVOPQ8N4V2 548 aa8.89□□□□□ -0.99
TRIO-208ENST00000506611 NDFIP2Q9NV92 336 aa8.89□□□□□ -0.99
TRIO-208ENST00000506611 SCHIP1Q9P0W5 487 aaPredicted RBP8.89□□□□□ -0.99
TRIO-208ENST00000506611 MKRN1Q9UHC7 482 aaKnown RBP8.89□□□□□ -0.99
TRIO-208ENST00000506611 ADAMTS8Q9UP79 889 aa8.89□□□□□ -0.99
TRIO-208ENST00000506611 MAFBQ9Y5Q3 323 aaPredicted RBP8.89□□□□□ -0.99
TRIO-208ENST00000506611 PARP3Q9Y6F1 533 aa8.89□□□□□ -0.99
TRIO-208ENST00000506611 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
TRIO-208ENST00000506611 CELA2BP08218 269 aaPredicted RBP8.88□□□□□ -0.99
TRIO-208ENST00000506611 TBCELQ5QJ74 424 aa8.88□□□□□ -0.99
TRIO-208ENST00000506611 FOXR1Q6PIV2 292 aa8.88□□□□□ -0.99
TRIO-208ENST00000506611 TNS4Q8IZW8 715 aa8.88□□□□□ -0.99
TRIO-208ENST00000506611 TPCN2Q8NHX9 752 aa8.88□□□□□ -0.99
TRIO-208ENST00000506611 BNIP3LO60238 219 aa8.87□□□□□ -0.99
TRIO-208ENST00000506611 CCDC102BQ68D86 513 aa8.87□□□□□ -0.99
TRIO-208ENST00000506611 OGFOD1Q8N543 542 aa8.87□□□□□ -0.99
TRIO-208ENST00000506611 ACDQ96AP0 544 aa8.87□□□□□ -0.99
TRIO-208ENST00000506611 KLRG1Q96E93 195 aa8.87□□□□□ -0.99
TRIO-208ENST00000506611 TRERF1Q96PN7 1200 aa8.87□□□□□ -0.99
TRIO-208ENST00000506611 MX2P20592 715 aa8.86□□□□□ -0.99
TRIO-208ENST00000506611 TXLNAP40222 546 aa8.86□□□□□ -0.99
TRIO-208ENST00000506611 LBRQ14739 615 aaKnown RBP8.86□□□□□ -0.99
TRIO-208ENST00000506611 SH3PXD2AQ5TCZ1 1133 aa8.86□□□□□ -0.99
TRIO-208ENST00000506611 TRIM50Q86XT4 487 aa8.86□□□□□ -0.99
TRIO-208ENST00000506611 SIX5Q8N196 739 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms