RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 SSFA2P28290 1259 aa20.92■□□□□ 0.94
DDR1-258ENST00000506573 RBM42Q9BTD8 480 aaKnown RBP20.92■□□□□ 0.94
DDR1-258ENST00000506573 HMOX1P09601 288 aa20.91■□□□□ 0.94
DDR1-258ENST00000506573 YY1P25490 414 aa20.91■□□□□ 0.94
DDR1-258ENST00000506573 C4BP0C0L5 1744 aa20.9■□□□□ 0.94
DDR1-258ENST00000506573 PHF14O94880 888 aa20.9■□□□□ 0.94
DDR1-258ENST00000506573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.89■□□□□ 0.93
DDR1-258ENST00000506573 U2SURPO15042 1029 aaKnown RBP20.89■□□□□ 0.93
DDR1-258ENST00000506573 GNPATO15228 680 aa20.89■□□□□ 0.93
DDR1-258ENST00000506573 LINC00116Q8NCU8 138 aa20.89■□□□□ 0.93
DDR1-258ENST00000506573 KDM6AO15550 1401 aaPredicted RBP20.88■□□□□ 0.93
DDR1-258ENST00000506573 MSL1Q68DK7 614 aa20.88■□□□□ 0.93
DDR1-258ENST00000506573 NFATC2IPQ8NCF5 419 aa20.88■□□□□ 0.93
DDR1-258ENST00000506573 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
DDR1-258ENST00000506573 TUBGCP6Q96RT7 1819 aa20.88■□□□□ 0.93
DDR1-258ENST00000506573 RTCBQ9Y3I0 505 aaKnown RBP20.87■□□□□ 0.93
DDR1-258ENST00000506573 TAF1LQ8IZX4 1826 aa20.87■□□□□ 0.93
DDR1-258ENST00000506573 ITPK1Q13572 414 aa20.86■□□□□ 0.93
DDR1-258ENST00000506573 GPR162Q16538 588 aa20.86■□□□□ 0.93
DDR1-258ENST00000506573 TRAPPC3LQ5T215 181 aa20.85■□□□□ 0.93
DDR1-258ENST00000506573 RC3H1Q5TC82 1133 aaKnown RBP20.85■□□□□ 0.93
DDR1-258ENST00000506573 PTCD1O75127 700 aaKnown RBP20.84■□□□□ 0.93
DDR1-258ENST00000506573 ADRA2BP18089 450 aa20.84■□□□□ 0.93
DDR1-258ENST00000506573 SLC52A2Q9HAB3 445 aa20.84■□□□□ 0.93
DDR1-258ENST00000506573 GAS2L2Q8NHY3 880 aa20.83■□□□□ 0.93
DDR1-258ENST00000506573 CNTNAP4Q9C0A0 1308 aa20.82■□□□□ 0.92
DDR1-258ENST00000506573 COL24A1Q17RW2 1714 aa20.82■□□□□ 0.92
DDR1-258ENST00000506573 RNMTO43148 476 aaKnown RBP20.82■□□□□ 0.92
DDR1-258ENST00000506573 MTHFSDQ2M296 383 aaKnown RBP20.82■□□□□ 0.92
DDR1-258ENST00000506573 PELP1Q8IZL8 1130 aaKnown RBP20.82■□□□□ 0.92
DDR1-258ENST00000506573 CD2APQ9Y5K6 639 aa20.82■□□□□ 0.92
DDR1-258ENST00000506573 ZNF831Q5JPB2 1677 aa20.8■□□□□ 0.92
DDR1-258ENST00000506573 RFC4P35249 363 aa20.8■□□□□ 0.92
DDR1-258ENST00000506573 RPS6KA4O75676 772 aa20.79■□□□□ 0.92
DDR1-258ENST00000506573 NLGN1Q8N2Q7 840 aa20.79■□□□□ 0.92
DDR1-258ENST00000506573 LGR6Q9HBX8 967 aa20.79■□□□□ 0.92
DDR1-258ENST00000506573 UBR3Q6ZT12 1888 aa20.78■□□□□ 0.92
DDR1-258ENST00000506573 COL3A1P02461 1466 aaPredicted RBP20.78■□□□□ 0.92
DDR1-258ENST00000506573 GNAT3A8MTJ3 354 aa20.78■□□□□ 0.92
DDR1-258ENST00000506573 PPP2R1AP30153 589 aa20.78■□□□□ 0.92
DDR1-258ENST00000506573 TTC5Q8N0Z6 440 aa20.78■□□□□ 0.92
DDR1-258ENST00000506573 SLC4A9Q96Q91 983 aa20.78■□□□□ 0.92
DDR1-258ENST00000506573 GRIN3BO60391 1043 aa20.77■□□□□ 0.92
DDR1-258ENST00000506573 TEFQ10587 303 aa20.77■□□□□ 0.92
DDR1-258ENST00000506573 AMIGO3Q86WK7 504 aa20.77■□□□□ 0.92
DDR1-258ENST00000506573 NLGN2Q8NFZ4 835 aa20.77■□□□□ 0.92
DDR1-258ENST00000506573 NEFMP07197 916 aa20.76■□□□□ 0.91
DDR1-258ENST00000506573 U2AF1L5P0DN76 240 aaPredicted RBP20.76■□□□□ 0.91
DDR1-258ENST00000506573 U2AF1Q01081 240 aaKnown RBP eCLIP20.76■□□□□ 0.91
DDR1-258ENST00000506573 SCN11AQ9UI33 1791 aa20.76■□□□□ 0.91
DDR1-258ENST00000506573 CRKLP46109 303 aaKnown RBP20.75■□□□□ 0.91
DDR1-258ENST00000506573 SMIM5Q71RC9 77 aa20.75■□□□□ 0.91
DDR1-258ENST00000506573 ARHGEF1Q92888 912 aaKnown RBP20.75■□□□□ 0.91
DDR1-258ENST00000506573 PRKAR2BP31323 418 aa20.74■□□□□ 0.91
DDR1-258ENST00000506573 MRC1P22897 1456 aa20.74■□□□□ 0.91
DDR1-258ENST00000506573 FCHSD2O94868 740 aa20.73■□□□□ 0.91
DDR1-258ENST00000506573 MMP10P09238 476 aa20.73■□□□□ 0.91
DDR1-258ENST00000506573 VSIG10Q8N0Z9 540 aa20.73■□□□□ 0.91
DDR1-258ENST00000506573 RTF1Q92541 710 aaKnown RBP20.72■□□□□ 0.91
DDR1-258ENST00000506573 RSPH6AQ9H0K4 717 aa20.72■□□□□ 0.91
DDR1-258ENST00000506573 SLC39A6Q13433 755 aa20.71■□□□□ 0.91
DDR1-258ENST00000506573 CCDC87Q9NVE4 849 aa20.71■□□□□ 0.91
DDR1-258ENST00000506573 PARP3Q9Y6F1 533 aa20.71■□□□□ 0.91
DDR1-258ENST00000506573 UTRNP46939 3433 aa20.7■□□□□ 0.9
DDR1-258ENST00000506573 ZPR1O75312 459 aa20.7■□□□□ 0.9
DDR1-258ENST00000506573 STARD3NLO95772 234 aa20.7■□□□□ 0.9
DDR1-258ENST00000506573 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
DDR1-258ENST00000506573 COL5A3P25940 1745 aaPredicted RBP20.7■□□□□ 0.9
DDR1-258ENST00000506573 DNAJC10Q8IXB1 793 aa20.69■□□□□ 0.9
DDR1-258ENST00000506573 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
DDR1-258ENST00000506573 GYS1P13807 737 aa20.68■□□□□ 0.9
DDR1-258ENST00000506573 NPM2Q86SE8 214 aaKnown RBP20.68■□□□□ 0.9
DDR1-258ENST00000506573 GOLGB1Q14789 3259 aaKnown RBP20.68■□□□□ 0.9
DDR1-258ENST00000506573 IL17REQ8NFR9 667 aa20.67■□□□□ 0.9
DDR1-258ENST00000506573 PHACTR3Q96KR7 559 aa20.67■□□□□ 0.9
DDR1-258ENST00000506573 CICQ96RK0 1608 aaPredicted RBP20.67■□□□□ 0.9
DDR1-258ENST00000506573 CYP19A1P11511 503 aaPredicted RBP20.66■□□□□ 0.9
DDR1-258ENST00000506573 INTS5Q6P9B9 1019 aaKnown RBP20.66■□□□□ 0.9
DDR1-258ENST00000506573 ZNF790Q6PG37 636 aa20.66■□□□□ 0.9
DDR1-258ENST00000506573 ADAMTS7Q9UKP4 1686 aa20.66■□□□□ 0.9
DDR1-258ENST00000506573 USP42Q9H9J4 1324 aaKnown RBP20.65■□□□□ 0.9
DDR1-258ENST00000506573 BTBD11A6QL63 1104 aa20.65■□□□□ 0.9
DDR1-258ENST00000506573 HTATSF1O43719 755 aaKnown RBP20.65■□□□□ 0.9
DDR1-258ENST00000506573 TGFB2P61812 414 aa20.65■□□□□ 0.9
DDR1-258ENST00000506573 RALBP1Q15311 655 aa20.65■□□□□ 0.9
DDR1-258ENST00000506573 FMNL2Q96PY5 1086 aa20.65■□□□□ 0.9
DDR1-258ENST00000506573 A0A087WZG4 1122 aa20.64■□□□□ 0.89
DDR1-258ENST00000506573 YBX3P16989 372 aaKnown RBP eCLIP20.64■□□□□ 0.89
DDR1-258ENST00000506573 KCPQ6ZWJ8 1503 aa20.63■□□□□ 0.89
DDR1-258ENST00000506573 CHD4Q14839 1912 aa20.63■□□□□ 0.89
DDR1-258ENST00000506573 CEMIPQ8WUJ3 1361 aa20.63■□□□□ 0.89
DDR1-258ENST00000506573 SOS1Q07889 1333 aaPredicted RBP20.63■□□□□ 0.89
DDR1-258ENST00000506573 ZNF784Q8NCA9 323 aaPredicted RBP20.63■□□□□ 0.89
DDR1-258ENST00000506573 TJP1Q07157 1748 aa20.63■□□□□ 0.89
DDR1-258ENST00000506573 HEG1Q9ULI3 1381 aa20.61■□□□□ 0.89
DDR1-258ENST00000506573 ZNF496Q96IT1 587 aaPredicted RBP20.61■□□□□ 0.89
DDR1-258ENST00000506573 SRP68Q9UHB9 627 aaKnown RBP20.61■□□□□ 0.89
DDR1-258ENST00000506573 COL15A1P39059 1388 aa20.6■□□□□ 0.89
DDR1-258ENST00000506573 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
DDR1-258ENST00000506573 MYH14Q7Z406 1995 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms