RNA–Protein interactions for RNA: ENST00000506464.5

ABCC3-208, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 4

Gene ABCC3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-208ENST00000506464 ATG3Q9NT62 314 aa16.53■□□□□ 0.24
ABCC3-208ENST00000506464 ASAP1Q9ULH1 1129 aa16.53■□□□□ 0.24
ABCC3-208ENST00000506464 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
ABCC3-208ENST00000506464 YY1P25490 414 aa16.52■□□□□ 0.24
ABCC3-208ENST00000506464 ZEB1P37275 1124 aaPredicted RBP16.52■□□□□ 0.24
ABCC3-208ENST00000506464 ATP6V1AP38606 617 aa16.52■□□□□ 0.24
ABCC3-208ENST00000506464 AKAP4Q5JQC9 854 aa16.52■□□□□ 0.24
ABCC3-208ENST00000506464 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
ABCC3-208ENST00000506464 CICQ96RK0 1608 aaPredicted RBP16.49■□□□□ 0.23
ABCC3-208ENST00000506464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.49■□□□□ 0.23
ABCC3-208ENST00000506464 RC3H1Q5TC82 1133 aaKnown RBP16.49■□□□□ 0.23
ABCC3-208ENST00000506464 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
ABCC3-208ENST00000506464 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
ABCC3-208ENST00000506464 ADRA2BP18089 450 aa16.48■□□□□ 0.23
ABCC3-208ENST00000506464 ITPK1Q13572 414 aa16.48■□□□□ 0.23
ABCC3-208ENST00000506464 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
ABCC3-208ENST00000506464 CNTNAP4Q9C0A0 1308 aa16.47■□□□□ 0.23
ABCC3-208ENST00000506464 CHD4Q14839 1912 aa16.47■□□□□ 0.23
ABCC3-208ENST00000506464 GNPATO15228 680 aa16.47■□□□□ 0.23
ABCC3-208ENST00000506464 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
ABCC3-208ENST00000506464 CFAP53Q96M91 514 aa16.47■□□□□ 0.23
ABCC3-208ENST00000506464 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
ABCC3-208ENST00000506464 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
ABCC3-208ENST00000506464 MRC1P22897 1456 aa16.47■□□□□ 0.23
ABCC3-208ENST00000506464 PHF14O94880 888 aa16.46■□□□□ 0.23
ABCC3-208ENST00000506464 RTCBQ9Y3I0 505 aaKnown RBP16.46■□□□□ 0.23
ABCC3-208ENST00000506464 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
ABCC3-208ENST00000506464 HMOX1P09601 288 aa16.45■□□□□ 0.22
ABCC3-208ENST00000506464 GPR162Q16538 588 aa16.45■□□□□ 0.22
ABCC3-208ENST00000506464 MSL1Q68DK7 614 aa16.45■□□□□ 0.22
ABCC3-208ENST00000506464 NFATC2IPQ8NCF5 419 aa16.45■□□□□ 0.22
ABCC3-208ENST00000506464 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
ABCC3-208ENST00000506464 SLC52A2Q9HAB3 445 aa16.44■□□□□ 0.22
ABCC3-208ENST00000506464 VIRMAQ69YN4 1812 aaKnown RBP16.44■□□□□ 0.22
ABCC3-208ENST00000506464 GAS2L2Q8NHY3 880 aa16.43■□□□□ 0.22
ABCC3-208ENST00000506464 NUDCQ9Y266 331 aa16.43■□□□□ 0.22
ABCC3-208ENST00000506464 RNMTO43148 476 aaKnown RBP16.42■□□□□ 0.22
ABCC3-208ENST00000506464 GRIN3BO60391 1043 aa16.42■□□□□ 0.22
ABCC3-208ENST00000506464 RPS6KA4O75676 772 aa16.42■□□□□ 0.22
ABCC3-208ENST00000506464 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
ABCC3-208ENST00000506464 SLC4A9Q96Q91 983 aa16.42■□□□□ 0.22
ABCC3-208ENST00000506464 U2SURPO15042 1029 aaKnown RBP16.41■□□□□ 0.22
ABCC3-208ENST00000506464 MTHFSDQ2M296 383 aaKnown RBP16.41■□□□□ 0.22
ABCC3-208ENST00000506464 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
ABCC3-208ENST00000506464 TJP1Q07157 1748 aa16.4■□□□□ 0.22
ABCC3-208ENST00000506464 PTCD1O75127 700 aaKnown RBP16.4■□□□□ 0.22
ABCC3-208ENST00000506464 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
ABCC3-208ENST00000506464 RFC4P35249 363 aa16.39■□□□□ 0.21
ABCC3-208ENST00000506464 VSIG10Q8N0Z9 540 aa16.39■□□□□ 0.21
ABCC3-208ENST00000506464 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
ABCC3-208ENST00000506464 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
ABCC3-208ENST00000506464 C4AP0C0L4 1744 aa16.37■□□□□ 0.21
ABCC3-208ENST00000506464 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
ABCC3-208ENST00000506464 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
ABCC3-208ENST00000506464 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
ABCC3-208ENST00000506464 CRKLP46109 303 aaKnown RBP16.37■□□□□ 0.21
ABCC3-208ENST00000506464 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
ABCC3-208ENST00000506464 ARHGEF1Q92888 912 aaKnown RBP16.37■□□□□ 0.21
ABCC3-208ENST00000506464 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
ABCC3-208ENST00000506464 MMP10P09238 476 aa16.36■□□□□ 0.21
ABCC3-208ENST00000506464 TEFQ10587 303 aa16.36■□□□□ 0.21
ABCC3-208ENST00000506464 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
ABCC3-208ENST00000506464 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
ABCC3-208ENST00000506464 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
ABCC3-208ENST00000506464 FCHSD2O94868 740 aa16.34■□□□□ 0.21
ABCC3-208ENST00000506464 GYS1P13807 737 aa16.34■□□□□ 0.21
ABCC3-208ENST00000506464 SMIM5Q71RC9 77 aa16.34■□□□□ 0.21
ABCC3-208ENST00000506464 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
ABCC3-208ENST00000506464 CCDC87Q9NVE4 849 aa16.34■□□□□ 0.21
ABCC3-208ENST00000506464 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
ABCC3-208ENST00000506464 PRKAR2BP31323 418 aa16.33■□□□□ 0.2
ABCC3-208ENST00000506464 TGFB2P61812 414 aa16.33■□□□□ 0.2
ABCC3-208ENST00000506464 ZNF784Q8NCA9 323 aaPredicted RBP16.33■□□□□ 0.2
ABCC3-208ENST00000506464 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.2
ABCC3-208ENST00000506464 PARP3Q9Y6F1 533 aa16.33■□□□□ 0.2
ABCC3-208ENST00000506464 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
ABCC3-208ENST00000506464 CEMIPQ8WUJ3 1361 aa16.33■□□□□ 0.2
ABCC3-208ENST00000506464 UTRNP46939 3433 aa16.32■□□□□ 0.2
ABCC3-208ENST00000506464 STARD3NLO95772 234 aa16.32■□□□□ 0.2
ABCC3-208ENST00000506464 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
ABCC3-208ENST00000506464 CYP19A1P11511 503 aaPredicted RBP16.32■□□□□ 0.2
ABCC3-208ENST00000506464 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.25e-7■■■□□ 17.8
ABCC3-208ENST00000506464 SLC39A6Q13433 755 aa16.32■□□□□ 0.2
ABCC3-208ENST00000506464 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
ABCC3-208ENST00000506464 DNAJC10Q8IXB1 793 aa16.32■□□□□ 0.2
ABCC3-208ENST00000506464 C10orf71Q711Q0 1435 aa16.31■□□□□ 0.2
ABCC3-208ENST00000506464 SOS1Q07889 1333 aaPredicted RBP16.31■□□□□ 0.2
ABCC3-208ENST00000506464 NEFMP07197 916 aa16.31■□□□□ 0.2
ABCC3-208ENST00000506464 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.2
ABCC3-208ENST00000506464 DDX10Q13206 875 aaKnown RBP16.31■□□□□ 0.2
ABCC3-208ENST00000506464 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
ABCC3-208ENST00000506464 ZPR1O75312 459 aa16.3■□□□□ 0.2
ABCC3-208ENST00000506464 ZNF790Q6PG37 636 aa16.3■□□□□ 0.2
ABCC3-208ENST00000506464 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
ABCC3-208ENST00000506464 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
ABCC3-208ENST00000506464 PNNQ9H307 717 aaKnown RBP16.29■□□□□ 0.2
ABCC3-208ENST00000506464 COL15A1P39059 1388 aa16.28■□□□□ 0.2
ABCC3-208ENST00000506464 HEG1Q9ULI3 1381 aa16.28■□□□□ 0.2
ABCC3-208ENST00000506464 A0A087WZG4 1122 aa16.28■□□□□ 0.2
ABCC3-208ENST00000506464 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms