RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 MAP3K5Q99683 1374 aa23.45■■□□□ 1.34
AP3S1-204ENST00000506430 YY1P25490 414 aa23.45■■□□□ 1.34
AP3S1-204ENST00000506430 ATP6V1AP38606 617 aa23.45■■□□□ 1.34
AP3S1-204ENST00000506430 C4BP0C0L5 1744 aa23.45■■□□□ 1.34
AP3S1-204ENST00000506430 PHF14O94880 888 aa23.44■■□□□ 1.34
AP3S1-204ENST00000506430 FLAD1Q8NFF5 587 aa23.44■■□□□ 1.34
AP3S1-204ENST00000506430 COL24A1Q17RW2 1714 aa23.44■■□□□ 1.34
AP3S1-204ENST00000506430 HMOX1P09601 288 aa23.43■■□□□ 1.34
AP3S1-204ENST00000506430 C1orf141Q5JVX7 400 aa23.43■■□□□ 1.34
AP3S1-204ENST00000506430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.42■■□□□ 1.34
AP3S1-204ENST00000506430 CABP4P57796 275 aa23.42■■□□□ 1.34
AP3S1-204ENST00000506430 SLC4A9Q96Q91 983 aa23.42■■□□□ 1.34
AP3S1-204ENST00000506430 GOLGB1Q14789 3259 aaKnown RBP23.42■■□□□ 1.34
AP3S1-204ENST00000506430 NPC1L1Q9UHC9 1359 aa23.4■■□□□ 1.34
AP3S1-204ENST00000506430 DIAPH1O60610 1272 aaKnown RBP23.4■■□□□ 1.34
AP3S1-204ENST00000506430 NFATC2IPQ8NCF5 419 aa23.4■■□□□ 1.34
AP3S1-204ENST00000506430 RBM42Q9BTD8 480 aaKnown RBP23.4■■□□□ 1.34
AP3S1-204ENST00000506430 NLGN2Q8NFZ4 835 aa23.39■■□□□ 1.33
AP3S1-204ENST00000506430 GNPATO15228 680 aa23.38■■□□□ 1.33
AP3S1-204ENST00000506430 SSFA2P28290 1259 aa23.37■■□□□ 1.33
AP3S1-204ENST00000506430 AKAP4Q5JQC9 854 aa23.36■■□□□ 1.33
AP3S1-204ENST00000506430 LGR6Q9HBX8 967 aa23.36■■□□□ 1.33
AP3S1-204ENST00000506430 UBR3Q6ZT12 1888 aa23.36■■□□□ 1.33
AP3S1-204ENST00000506430 GPR162Q16538 588 aa23.35■■□□□ 1.33
AP3S1-204ENST00000506430 PTCD1O75127 700 aaKnown RBP23.34■■□□□ 1.33
AP3S1-204ENST00000506430 MTHFSDQ2M296 383 aaKnown RBP23.34■■□□□ 1.33
AP3S1-204ENST00000506430 COL3A1P02461 1466 aaPredicted RBP23.32■■□□□ 1.32
AP3S1-204ENST00000506430 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
AP3S1-204ENST00000506430 U2SURPO15042 1029 aaKnown RBP23.31■■□□□ 1.32
AP3S1-204ENST00000506430 RNMTO43148 476 aaKnown RBP23.3■■□□□ 1.32
AP3S1-204ENST00000506430 TRAPPC3LQ5T215 181 aa23.3■■□□□ 1.32
AP3S1-204ENST00000506430 SLC52A2Q9HAB3 445 aa23.3■■□□□ 1.32
AP3S1-204ENST00000506430 RTCBQ9Y3I0 505 aaKnown RBP23.3■■□□□ 1.32
AP3S1-204ENST00000506430 RC3H1Q5TC82 1133 aaKnown RBP23.29■■□□□ 1.32
AP3S1-204ENST00000506430 CD2APQ9Y5K6 639 aa23.29■■□□□ 1.32
AP3S1-204ENST00000506430 CNTNAP4Q9C0A0 1308 aa23.28■■□□□ 1.32
AP3S1-204ENST00000506430 ARHGEF1Q92888 912 aaKnown RBP23.27■■□□□ 1.32
AP3S1-204ENST00000506430 SCN11AQ9UI33 1791 aa23.27■■□□□ 1.32
AP3S1-204ENST00000506430 ZNF831Q5JPB2 1677 aa23.26■■□□□ 1.31
AP3S1-204ENST00000506430 RPS6KA4O75676 772 aa23.26■■□□□ 1.31
AP3S1-204ENST00000506430 YBX3P16989 372 aaKnown RBP eCLIP23.26■■□□□ 1.319e-7■□□□□ 10.6
AP3S1-204ENST00000506430 SLC39A6Q13433 755 aa23.26■■□□□ 1.31
AP3S1-204ENST00000506430 PPP2R1AP30153 589 aa23.25■■□□□ 1.31
AP3S1-204ENST00000506430 CRKLP46109 303 aaKnown RBP23.24■■□□□ 1.31
AP3S1-204ENST00000506430 COL5A3P25940 1745 aaPredicted RBP23.24■■□□□ 1.31
AP3S1-204ENST00000506430 MMP10P09238 476 aa23.23■■□□□ 1.31
AP3S1-204ENST00000506430 ADRA2BP18089 450 aa23.22■■□□□ 1.31
AP3S1-204ENST00000506430 RFC4P35249 363 aa23.22■■□□□ 1.31
AP3S1-204ENST00000506430 DNAJC10Q8IXB1 793 aa23.22■■□□□ 1.31
AP3S1-204ENST00000506430 ZNF784Q8NCA9 323 aaPredicted RBP23.22■■□□□ 1.31
AP3S1-204ENST00000506430 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
AP3S1-204ENST00000506430 MYH14Q7Z406 1995 aaKnown RBP23.21■■□□□ 1.31
AP3S1-204ENST00000506430 PHACTR3Q96KR7 559 aa23.21■■□□□ 1.31
AP3S1-204ENST00000506430 MRC1P22897 1456 aa23.21■■□□□ 1.31
AP3S1-204ENST00000506430 GYS1P13807 737 aa23.2■■□□□ 1.3
AP3S1-204ENST00000506430 INTS5Q6P9B9 1019 aaKnown RBP23.2■■□□□ 1.3
AP3S1-204ENST00000506430 NLGN1Q8N2Q7 840 aa23.2■■□□□ 1.3
AP3S1-204ENST00000506430 IL17REQ8NFR9 667 aa23.2■■□□□ 1.3
AP3S1-204ENST00000506430 GAS2L2Q8NHY3 880 aa23.19■■□□□ 1.3
AP3S1-204ENST00000506430 WWC3Q9ULE0 1092 aa23.19■■□□□ 1.3
AP3S1-204ENST00000506430 GNAT3A8MTJ3 354 aa23.18■■□□□ 1.3
AP3S1-204ENST00000506430 GRIN3BO60391 1043 aa23.18■■□□□ 1.3
AP3S1-204ENST00000506430 PRKAR2BP31323 418 aa23.18■■□□□ 1.3
AP3S1-204ENST00000506430 RSPH6AQ9H0K4 717 aa23.18■■□□□ 1.3
AP3S1-204ENST00000506430 TJP1Q07157 1748 aa23.18■■□□□ 1.3
AP3S1-204ENST00000506430 ADAMTS7Q9UKP4 1686 aa23.18■■□□□ 1.3
AP3S1-204ENST00000506430 SRP68Q9UHB9 627 aaKnown RBP23.17■■□□□ 1.3
AP3S1-204ENST00000506430 CHD4Q14839 1912 aa23.17■■□□□ 1.3
AP3S1-204ENST00000506430 U2AF1L5P0DN76 240 aaPredicted RBP23.16■■□□□ 1.3
AP3S1-204ENST00000506430 CYP19A1P11511 503 aaPredicted RBP23.16■■□□□ 1.3
AP3S1-204ENST00000506430 U2AF1Q01081 240 aaKnown RBP eCLIP23.16■■□□□ 1.32e-6■■■■□ 19.7
AP3S1-204ENST00000506430 NUDCQ9Y266 331 aa23.16■■□□□ 1.3
AP3S1-204ENST00000506430 KCPQ6ZWJ8 1503 aa23.15■■□□□ 1.3
AP3S1-204ENST00000506430 CCDC87Q9NVE4 849 aa23.15■■□□□ 1.3
AP3S1-204ENST00000506430 VIRMAQ69YN4 1812 aaKnown RBP23.14■■□□□ 1.29
AP3S1-204ENST00000506430 USP42Q9H9J4 1324 aaKnown RBP23.13■■□□□ 1.29
AP3S1-204ENST00000506430 CICQ96RK0 1608 aaPredicted RBP23.13■■□□□ 1.29
AP3S1-204ENST00000506430 TEFQ10587 303 aa23.13■■□□□ 1.29
AP3S1-204ENST00000506430 FKBP8Q14318 412 aa23.13■■□□□ 1.29
AP3S1-204ENST00000506430 C4AP0C0L4 1744 aa23.11■■□□□ 1.29
AP3S1-204ENST00000506430 TTC5Q8N0Z6 440 aa23.11■■□□□ 1.29
AP3S1-204ENST00000506430 VSIG10Q8N0Z9 540 aa23.11■■□□□ 1.29
AP3S1-204ENST00000506430 ZBTB1Q9Y2K1 713 aa23.11■■□□□ 1.29
AP3S1-204ENST00000506430 PARP3Q9Y6F1 533 aa23.11■■□□□ 1.29
AP3S1-204ENST00000506430 SOS1Q07889 1333 aaPredicted RBP23.1■■□□□ 1.29
AP3S1-204ENST00000506430 FCHSD2O94868 740 aa23.1■■□□□ 1.29
AP3S1-204ENST00000506430 ZNF790Q6PG37 636 aa23.1■■□□□ 1.29
AP3S1-204ENST00000506430 ZNF496Q96IT1 587 aaPredicted RBP23.1■■□□□ 1.29
AP3S1-204ENST00000506430 USPL1Q5W0Q7 1092 aa23.09■■□□□ 1.29
AP3S1-204ENST00000506430 CEMIPQ8WUJ3 1361 aa23.09■■□□□ 1.29
AP3S1-204ENST00000506430 A0A0G2JLW4 131 aa23.08■■□□□ 1.29
AP3S1-204ENST00000506430 DDR1Q08345 913 aa23.08■■□□□ 1.29
AP3S1-204ENST00000506430 PXDNLA1KZ92 1463 aa23.07■■□□□ 1.28
AP3S1-204ENST00000506430 KCNQ3O43525 872 aa23.07■■□□□ 1.28
AP3S1-204ENST00000506430 ZPR1O75312 459 aa23.07■■□□□ 1.28
AP3S1-204ENST00000506430 TGFB2P61812 414 aa23.07■■□□□ 1.28
AP3S1-204ENST00000506430 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
AP3S1-204ENST00000506430 CANXP27824 592 aaKnown RBP23.06■■□□□ 1.28
AP3S1-204ENST00000506430 MCM10Q7L590 875 aa23.06■■□□□ 1.28
AP3S1-204ENST00000506430 UBR2Q8IWV8 1755 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms